BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00022004
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275861.1| PREDICTED: geranylgeranyl transferase type-2...    80   5e-13
ref|XP_002281543.1| PREDICTED: geranylgeranyl transferase type-2...    79   9e-13
ref|XP_004135836.1| PREDICTED: geranylgeranyl transferase type-2...    79   1e-12
ref|XP_003524939.1| PREDICTED: geranylgeranyl transferase type-2...    78   2e-12
ref|NP_001242036.1| uncharacterized protein LOC100793642 [Glycin...    78   2e-12

>ref|XP_002275861.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta [Vitis
           vinifera] gi|147860391|emb|CAN82570.1| hypothetical
           protein VITISV_016117 [Vitis vinifera]
           gi|296090220|emb|CBI40039.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 32/45 (71%), Positives = 42/45 (93%)
 Frame = +2

Query: 62  SLLMEHLKMSGAYWGLATLDLLGKLGTVDQDEVVAWVLQCQHESG 196
           S++MEHL+M+GAYWGL TLDLLGKL  VD+DE+++WV++CQHESG
Sbjct: 29  SVVMEHLRMNGAYWGLTTLDLLGKLDMVDEDEIISWVMECQHESG 73



 Score = 62.8 bits (151), Expect = 8e-08
 Identities = 30/45 (66%), Positives = 36/45 (80%)
 Frame = +3

Query: 486 AGGFAGNVGHDPHLLYTLSAVQILALLGKLDVLVYENVSDCILKL 620
           +GGF GNVGHDPH+LYTLSAVQ+LAL  KL+VL  + VS+ I  L
Sbjct: 72  SGGFGGNVGHDPHILYTLSAVQVLALFDKLNVLDIDKVSNYIAGL 116


>ref|XP_002281543.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta [Vitis
           vinifera] gi|147821440|emb|CAN74579.1| hypothetical
           protein VITISV_024797 [Vitis vinifera]
           gi|296081232|emb|CBI17976.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score = 79.3 bits (194), Expect = 9e-13
 Identities = 34/45 (75%), Positives = 41/45 (91%)
 Frame = +2

Query: 62  SLLMEHLKMSGAYWGLATLDLLGKLGTVDQDEVVAWVLQCQHESG 196
           S++ EHL+M+GAYWGL TLDLLGKL  VDQDEVV+WV++CQHESG
Sbjct: 29  SVVTEHLRMNGAYWGLTTLDLLGKLEIVDQDEVVSWVMECQHESG 73



 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 25/45 (55%), Positives = 36/45 (80%)
 Frame = +3

Query: 486 AGGFAGNVGHDPHLLYTLSAVQILALLGKLDVLVYENVSDCILKL 620
           +GGF GN+GHDPH+++TLSAVQ+LAL  KL+VL  + +++ I  L
Sbjct: 72  SGGFGGNIGHDPHIVHTLSAVQVLALFDKLNVLDIDKITNYIAGL 116


>ref|XP_004135836.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta-like
           [Cucumis sativus] gi|449490992|ref|XP_004158768.1|
           PREDICTED: geranylgeranyl transferase type-2 subunit
           beta-like [Cucumis sativus]
          Length = 317

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 33/45 (73%), Positives = 40/45 (88%)
 Frame = +2

Query: 62  SLLMEHLKMSGAYWGLATLDLLGKLGTVDQDEVVAWVLQCQHESG 196
           S++MEHL+M+GAYWGL  LD+LGKL TVD DEVV+WV+ CQHESG
Sbjct: 25  SVVMEHLRMNGAYWGLTALDILGKLDTVDADEVVSWVMSCQHESG 69



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 29/45 (64%), Positives = 38/45 (84%)
 Frame = +3

Query: 486 AGGFAGNVGHDPHLLYTLSAVQILALLGKLDVLVYENVSDCILKL 620
           +GGF+GNVGHDPH+LYTLSAVQ+LAL  KLDVL  + V++ ++ L
Sbjct: 68  SGGFSGNVGHDPHILYTLSAVQVLALFDKLDVLDVDKVTNYVVGL 112


>ref|XP_003524939.1| PREDICTED: geranylgeranyl transferase type-2 subunit beta-like
           [Glycine max]
          Length = 320

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 33/45 (73%), Positives = 41/45 (91%)
 Frame = +2

Query: 62  SLLMEHLKMSGAYWGLATLDLLGKLGTVDQDEVVAWVLQCQHESG 196
           S++MEHL+M+GAYWGL TLDLLGKL TVD DEVV+W++ CQH+SG
Sbjct: 25  SVVMEHLRMNGAYWGLTTLDLLGKLHTVDVDEVVSWLMSCQHDSG 69



 Score = 59.7 bits (143), Expect = 7e-07
 Identities = 27/45 (60%), Positives = 35/45 (77%)
 Frame = +3

Query: 486 AGGFAGNVGHDPHLLYTLSAVQILALLGKLDVLVYENVSDCILKL 620
           +GGF GNV HDPH+LYTLSAVQ+L+L  KLDV+  + V+  I+ L
Sbjct: 68  SGGFGGNVEHDPHILYTLSAVQVLSLFDKLDVIDVDKVTSYIVSL 112


>ref|NP_001242036.1| uncharacterized protein LOC100793642 [Glycine max]
           gi|255635594|gb|ACU18147.1| unknown [Glycine max]
          Length = 317

 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 33/45 (73%), Positives = 41/45 (91%)
 Frame = +2

Query: 62  SLLMEHLKMSGAYWGLATLDLLGKLGTVDQDEVVAWVLQCQHESG 196
           S++MEHL+M+GAYWGL TLDLLGKL +VD DEVV+W++ CQHESG
Sbjct: 25  SVVMEHLRMNGAYWGLTTLDLLGKLHSVDVDEVVSWLMSCQHESG 69



 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 28/45 (62%), Positives = 36/45 (80%)
 Frame = +3

Query: 486 AGGFAGNVGHDPHLLYTLSAVQILALLGKLDVLVYENVSDCILKL 620
           +GGF GNVGHDPH+LYTLSAVQ+LAL  KL+V+  + V+  I+ L
Sbjct: 68  SGGFGGNVGHDPHILYTLSAVQVLALFDKLNVIDVDKVTSYIVSL 112