BLASTX nr result

ID: Coptis21_contig00021974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021974
         (1500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633150.1| PREDICTED: uncharacterized protein LOC100854...   421   e-115
ref|XP_004139403.1| PREDICTED: putative nuclease HARBI1-like [Cu...   378   e-102
ref|XP_003541490.1| PREDICTED: putative nuclease HARBI1-like [Gl...   350   7e-94
ref|XP_002325176.1| predicted protein [Populus trichocarpa] gi|2...   347   5e-93
ref|XP_003550806.1| PREDICTED: putative nuclease HARBI1-like [Gl...   342   2e-91

>ref|XP_003633150.1| PREDICTED: uncharacterized protein LOC100854497 [Vitis vinifera]
          Length = 427

 Score =  421 bits (1083), Expect = e-115
 Identities = 222/403 (55%), Positives = 283/403 (70%), Gaps = 10/403 (2%)
 Frame = +3

Query: 204  AVHNFLTQNDLQLLPSQTLTLESEITSTALSLNKLNYLLQS--SLNPTKTLKPKAPPVFS 377
            + ++FL QND+ LLPSQTLTLES+I+S +LSL+ L  LL +  SL P     P  PP  +
Sbjct: 27   SAYSFLLQNDVVLLPSQTLTLESQISSVSLSLSTLLSLLPNPKSLQPIFVAPPPPPPPPT 86

Query: 378  TH--SHCWFHRFLS--LKNNAQQWVETFRMSKTSFDTLLEKLAPSLENSVLVIPMHYILG 545
                  CWF RFLS    +   +WV+ F MSK SF  LL  L+PSL+ S+  +P +Y L 
Sbjct: 87   PQPPQQCWFQRFLSDASADYDSRWVDAFHMSKPSFTLLLRLLSPSLQASIPSLPPNYTLA 146

Query: 546  SALFRLAHGGSYKAVGRRFGMESEDACRAFYEVCKAVNDELSDLFELSTDLKRVVDGFGW 725
            +ALFRLAHG SY++VGRRFG++S  ACRAFY VCK VND+L  +FE  +D+ R+V GFGW
Sbjct: 147  AALFRLAHGASYRSVGRRFGLDSAGACRAFYVVCKVVNDKLGHMFEFRSDIGRIVVGFGW 206

Query: 726  ISLPNCCGVLGFSRFLVEGNV----GRVVVQGLVDSEGRFLDVSAGWPSEMSPSVILAQT 893
            ISLPNCCGVLGF +F V+G +    G ++VQ LVDSEGRFLDVSAGW S++ P  IL Q+
Sbjct: 207  ISLPNCCGVLGFGKFGVDGELLGKDGALMVQALVDSEGRFLDVSAGWSSKLKPDTILHQS 266

Query: 894  KLFSRVEESEELFNGALYELQSGNLIPQYILGNSCXXXXXXXXXXXXISNMDEDCISNFS 1073
             LFS V+ES EL NG  +EL  GNLIPQYILG+SC            + + +ED +S+ S
Sbjct: 267  ALFSGVDESRELLNGPPFELTDGNLIPQYILGDSC-LPLLPWLLTPYVRSSEEDSLSS-S 324

Query: 1074 EQSFNTTHSKAMELVSMAFARVRACWKLLSAKWKEECVEFLPFVILTGCLLHNFVIKCGD 1253
            EQ+FN  HS+ M LVS AF RVRA W+LL+  WKEEC+EF PFVI+TGCLLHNF+IKC +
Sbjct: 325  EQAFNFVHSRGMGLVSTAFCRVRARWQLLAKLWKEECIEFFPFVIVTGCLLHNFLIKCSE 384

Query: 1254 LVPDEIEVQSEDQEFPVFEGKGNVNGERIRDTLACHLCLVSQR 1382
             +PDE   +S++ E P+++GK N +G+RIRD LA HL  VS R
Sbjct: 385  PLPDENAGRSKEGELPIYQGKMNESGQRIRDALASHLSRVSLR 427


>ref|XP_004139403.1| PREDICTED: putative nuclease HARBI1-like [Cucumis sativus]
            gi|449494034|ref|XP_004159428.1| PREDICTED: putative
            nuclease HARBI1-like [Cucumis sativus]
          Length = 447

 Score =  378 bits (970), Expect = e-102
 Identities = 202/405 (49%), Positives = 269/405 (66%), Gaps = 12/405 (2%)
 Frame = +3

Query: 204  AVHNFLTQNDLQLLPSQTLTLESEITSTALSLNKLNYLLQSSLNPTKTLKPKAPPVFSTH 383
            + H+FL+ NDL LLPSQTL LES + ST+ SL+ L+  L     P  +L P  PP     
Sbjct: 53   SAHSFLSLNDLHLLPSQTLALESLLCSTSSSLHALSPRL-----PKLSLPPPLPPP---- 103

Query: 384  SHCWFHRFLSLKNNAQ---QWVETFRMSKTSFDTLLEKLAPSLENSVLVIPMHYILGSAL 554
              CWF RFLS  ++     +W  +FRMSK+SF  LL  L+P   +    +P    L +AL
Sbjct: 104  RQCWFQRFLSATSDVDCDPRWNLSFRMSKSSFSLLLRLLSPIQSSPSSSVPPDCALAAAL 163

Query: 555  FRLAHGGSYKAVGRRFGMESEDACRAFYEVCKAVNDELSDLFELSTDLKRVVDGFGWISL 734
            FRLAHG SYKAVGRRFG++S DACR+FY VCKA+N++L  L EL +D+ R+V GFGWISL
Sbjct: 164  FRLAHGASYKAVGRRFGIDSADACRSFYAVCKAINEKLGHLLELRSDIDRIVVGFGWISL 223

Query: 735  PNCCGVLGFSRFLVEGNV--GRVVVQGLVDSEGRFLDVSAGWPSEMSPSVILAQTKLFSR 908
            PNCCGVLG  RF  EG +  G ++VQ LVD+EGRFLDVSAGWPS M P+ IL Q+KL++ 
Sbjct: 224  PNCCGVLGLRRFGFEGELKNGSLLVQALVDAEGRFLDVSAGWPSSMKPATILRQSKLYAE 283

Query: 909  VEESEELFNGALYELQSGNLIPQYILGNSCXXXXXXXXXXXXISNMDEDCISNFSEQSFN 1088
            +E+S EL  G +Y L +   IPQY++G+SC               ++E+  S F  ++FN
Sbjct: 284  IEKSSELLKGPVYNLDNEKPIPQYLIGDSC--FPLLPWLLTPYMELNEEDSSGFCGRAFN 341

Query: 1089 TTHSKAMELVSMAFARVRACWKLLSAKWKEECVEFLPFVILTGCLLHNFVIKCGDLVPDE 1268
            +TH +AM LV+ AF R+RA WKLLS  WKE C +F PF+ILTGCLL NF+IKC + + +E
Sbjct: 342  STHGRAMALVNTAFCRLRARWKLLSKPWKEGCRDFFPFIILTGCLLQNFLIKCSEKLDEE 401

Query: 1269 IEVQ------SEDQEFPVFEGK-GNVNGERIRDTLACHLCLVSQR 1382
             + +      SE+Q+FP+F+G+ G+  G+ IRD LA HL  ++ R
Sbjct: 402  QDQEEGASCSSEEQKFPLFDGEIGDGRGKDIRDALALHLSSLNYR 446


>ref|XP_003541490.1| PREDICTED: putative nuclease HARBI1-like [Glycine max]
          Length = 448

 Score =  350 bits (897), Expect = 7e-94
 Identities = 201/406 (49%), Positives = 257/406 (63%), Gaps = 13/406 (3%)
 Frame = +3

Query: 204  AVHNFLTQNDLQLLPSQTLTLESEITSTALSLNKLNYLLQSSLNPTKTLKPKAPPVFSTH 383
            AV +FL+QNDL LLPSQ+L LES I+S          ++  S +P     P +PP    H
Sbjct: 65   AVQSFLSQNDLVLLPSQSLRLESLISS----------IISHSPSP-----PLSPP----H 105

Query: 384  SHCWFHRFLSLKNNAQQWVETFRMSKTSFDTLLEKLAPSLENSVLVIPMHYILGSALFRL 563
            S  WF RF S+ ++   W+  FRMSK SF  LL  L+PSL  S   +    +L +ALFRL
Sbjct: 106  SDSWFRRFRSVSDSL--WLHAFRMSKPSFSHLLHLLSPSLAPSFPHMAPDCVLAAALFRL 163

Query: 564  AHGGSYKAVGRRFGMESEDACRAFYEVCKAVNDELSDLFELSTDLKRVVDGFGWISLPNC 743
            AH   Y AV RRF +   DACRAF+ VCKA+ D L  LFEL TD +RVV GFG+ SLPNC
Sbjct: 164  AHAAPYPAVSRRFAISPPDACRAFFAVCKALADNLGHLFELRTDSERVVVGFGFSSLPNC 223

Query: 744  CGVLGFSRFLVE----GNVGRVVVQGLVDSEGRFLDVSAGWPSEMSPSVILAQTKLFSRV 911
             GVLGF+RF ++    G  G ++VQ LVDSEGRFLDVSAGWPS M P + L ++KL+  V
Sbjct: 224  FGVLGFTRFKIDDSLLGENGALIVQALVDSEGRFLDVSAGWPSTMKPEIFLRESKLYREV 283

Query: 912  EESEELFNGALYELQSGNLIPQYILGNSCXXXXXXXXXXXXISNMDEDCISNFSEQSFNT 1091
            E+S+EL NG  Y L  G LIPQYILG+SC              N +ED   + +E++FN 
Sbjct: 284  EQSKELLNGPSYNLSEGCLIPQYILGDSCFPLLPWLLTPYNRVN-EEDSFGS-AERAFNC 341

Query: 1092 THSKAMELVSMAFARVRACWKLLSA--KWKEECVEFLPFVILTGCLLHNFVIKCGDLVPD 1265
             H  AMELV  AF R+RA W+LL+A  KWK+ECVE LPFV++  CLLHNFV+K  + +PD
Sbjct: 342  VHGNAMELVGDAFGRLRARWRLLAASRKWKQECVEHLPFVVVACCLLHNFVVKFNEAMPD 401

Query: 1266 E------IEVQSE-DQEFPVFEGKGNVNGERIRDTLACHLCLVSQR 1382
            E      +E + E ++E P F+G G+ +  R+RD LA HL  +S R
Sbjct: 402  EGVSKWCVEKEKEKEEELPAFDGVGDESAVRVRDALALHLSRLSLR 447


>ref|XP_002325176.1| predicted protein [Populus trichocarpa] gi|222866610|gb|EEF03741.1|
            predicted protein [Populus trichocarpa]
          Length = 421

 Score =  347 bits (890), Expect = 5e-93
 Identities = 200/404 (49%), Positives = 255/404 (63%), Gaps = 11/404 (2%)
 Frame = +3

Query: 204  AVHNFLTQNDLQLLPSQTLTLESEITSTALSLNKLNYLLQSSLNPTKTLKPKAPPVFSTH 383
            A H+FL+QNDL LLPSQ+L LES               L SSL P  +  P  P +    
Sbjct: 45   AAHSFLSQNDLYLLPSQSLQLES---------------LLSSLPPPFSQFPSQPSL---- 85

Query: 384  SHCWFHRFLS--LKNNAQQWVETFRMSKTSFDTLLEKLAPSLENSV-LVIPMHYILGSAL 554
                FHRF+S    +  Q+WV+ FR+S+ +F  LL  L+PSL   +   IP    L SAL
Sbjct: 86   ----FHRFVSSATLDFDQRWVQFFRLSRPNFYRLLSLLSPSLVFFLPSTIPPETALASAL 141

Query: 555  FRLAHGGSYKAVGRRFGMESEDA-CRAFYEVCKAVNDELSDLFELSTDLKRVVDGFGWIS 731
            FRLAHG  YK V R+FG++S +A C AFY VCKAVND+L DLFE   DL+R+V GFGWIS
Sbjct: 142  FRLAHGACYKTVARKFGLDSSEASCLAFYSVCKAVNDKLGDLFEFRRDLERIVVGFGWIS 201

Query: 732  LPNCCGVLGFSRFLVEGNV----GRVVVQGLVDSEGRFLDVSAGWPSEMSPSVILAQTKL 899
            LPNCCG LGF RF V+G V    G ++VQ LVDSEGRFLD+SAGWPS M P  I  QT+L
Sbjct: 202  LPNCCGALGFGRFGVDGEVFGRNGSILVQALVDSEGRFLDISAGWPSSMEPVAIFRQTRL 261

Query: 900  FSRVEES--EELFNGALYELQSGNLIPQYILGNSCXXXXXXXXXXXXISNMDEDCISNFS 1073
            +  VE+S   EL  G  Y L  G  IPQY++G+SC            ++   E      +
Sbjct: 262  YLGVEDSRESELLKGPTYMLSDGCSIPQYVMGDSC-----FPLLPWLLTPYSEQDSFGSA 316

Query: 1074 EQSFNTTHSKAMELVSMAFARVRACWKLLSAKWKEECVEFLPFVILTGCLLHNFVIKCGD 1253
            E+ FN  HS+AM+LVS AF RV+A W+LL+ +WKE+ +EFLPFVI+ GC+LHNF+IK G+
Sbjct: 317  EREFNVAHSRAMKLVSTAFGRVKARWQLLARRWKEDSLEFLPFVIVMGCVLHNFLIKWGE 376

Query: 1254 LVPDE-IEVQSEDQEFPVFEGKGNVNGERIRDTLACHLCLVSQR 1382
             +P+E +    + +E  VFEG+G+  G+ IRD LA HL L S R
Sbjct: 377  PLPEESVGGCLKGEELLVFEGEGDETGQTIRDALAQHLSLASMR 420


>ref|XP_003550806.1| PREDICTED: putative nuclease HARBI1-like [Glycine max]
          Length = 406

 Score =  342 bits (876), Expect = 2e-91
 Identities = 197/399 (49%), Positives = 251/399 (62%), Gaps = 6/399 (1%)
 Frame = +3

Query: 204  AVHNFLTQNDLQLLPSQTLTLESEITSTALSLNKLNYLLQSSLNPTKTLKPKAPPVFSTH 383
            +  +FL+QNDL LLPSQ+L LES I+S          ++  S +P     P +PP    H
Sbjct: 32   SAESFLSQNDLVLLPSQSLRLESLISS----------IISHSPSP-----PLSPP----H 72

Query: 384  SHCWFHRFLSLKNNAQQWVETFRMSKTSFDTLLEKLAPSLENSVLVIPMHYILGSALFRL 563
               WF RF S+ ++  QW+  FRM K +F  LL  L+PSL  S   I    +L +ALFRL
Sbjct: 73   RDSWFSRFRSVSDS--QWLHAFRMLKPTFSHLLHLLSPSLAPSFPHIAPDCVLAAALFRL 130

Query: 564  AHGGSYKAVGRRFGMESEDACRAFYEVCKAVNDELSDLFELSTDLKRVVDGFGWISLPNC 743
            AH   Y AV RRF +   DACRAF+ VCKA+ D L  LFEL TD +RVV GFG+ SLPNC
Sbjct: 131  AHAAPYPAVSRRFAISPADACRAFFAVCKALADNLGHLFELRTDSQRVVVGFGFSSLPNC 190

Query: 744  CGVLGFSRFLVE----GNVGRVVVQGLVDSEGRFLDVSAGWPSEMSPSVILAQTKLFSRV 911
             GVLGF+RF ++    G  G ++VQ LVDSEGRFLDVSAGWPS M P  IL +TKL+  V
Sbjct: 191  FGVLGFARFKIDDSLLGENGALMVQALVDSEGRFLDVSAGWPSTMKPETILRETKLYREV 250

Query: 912  EESEELFNGALYELQSGNLIPQYILGNSCXXXXXXXXXXXXISNMDEDCISNFSEQSFNT 1091
            EES+EL NG  Y L  G LIPQYILG+SC              N +ED   + +E++FNT
Sbjct: 251  EESKELLNGPSYNLSEGCLIPQYILGDSCFPLLPWLLTPYNRVN-EEDSFGS-AERAFNT 308

Query: 1092 THSKAMELVSMAFARVRACWKLLSA--KWKEECVEFLPFVILTGCLLHNFVIKCGDLVPD 1265
             H  AM L+  AFAR+RA W+LL+A  KWK +CVE LPFV++ GCLLHNFV+K  + +PD
Sbjct: 309  AHDNAMGLLGDAFARLRASWRLLAASRKWKRDCVEHLPFVLVAGCLLHNFVLKFNEAMPD 368

Query: 1266 EIEVQSEDQEFPVFEGKGNVNGERIRDTLACHLCLVSQR 1382
              E   +++  P F+G  + +  R+RD LA HL  +S R
Sbjct: 369  --EGVEKEEGLPSFDGVEDESAVRVRDALALHLSRLSLR 405


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