BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021965
         (207 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514292.1| pentatricopeptide repeat-containing protein,...   117   1e-24
ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containi...   112   3e-23
ref|XP_002516573.1| pentatricopeptide repeat-containing protein,...   111   5e-23
ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22
gb|AFK38512.1| unknown [Medicago truncatula]                          107   1e-21

>ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546748|gb|EEF48246.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 608

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/68 (82%), Positives = 60/68 (88%)
 Frame = -3

Query: 205 CKEGNMDDALRFVYRMKEFKVHPNLVVFNSLIKGFVDLTDAGGVDEVLVLMEEYQVKPDV 26
           CKEGNM +ALRFVYRMKE  VHPNLV+FNSLIKGF+D+TD  GVDE L LMEEY VKPDV
Sbjct: 280 CKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEYGVKPDV 339

Query: 25  ITFSTIMN 2
           ITFSTIMN
Sbjct: 340 ITFSTIMN 347


>ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
           [Vitis vinifera] gi|297738818|emb|CBI28063.3| unnamed
           protein product [Vitis vinifera]
          Length = 636

 Score =  112 bits (280), Expect = 3e-23
 Identities = 51/68 (75%), Positives = 59/68 (86%)
 Frame = -3

Query: 205 CKEGNMDDALRFVYRMKEFKVHPNLVVFNSLIKGFVDLTDAGGVDEVLVLMEEYQVKPDV 26
           CKEG M DALRF+YRM+ + VHPNLV+FNSLIKGF+D+TD  GVDE L LMEE+ VKPDV
Sbjct: 293 CKEGKMKDALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDV 352

Query: 25  ITFSTIMN 2
           +TFSTIMN
Sbjct: 353 VTFSTIMN 360


>ref|XP_002516573.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544393|gb|EEF45914.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 396

 Score =  111 bits (278), Expect = 5e-23
 Identities = 54/68 (79%), Positives = 59/68 (86%)
 Frame = -3

Query: 205 CKEGNMDDALRFVYRMKEFKVHPNLVVFNSLIKGFVDLTDAGGVDEVLVLMEEYQVKPDV 26
           CKEG + +ALRFV+RMKE  VHPNLVVFNSLIKGFVD+ D  GVDEVL LMEE+ VKPDV
Sbjct: 56  CKEGRIKEALRFVHRMKELGVHPNLVVFNSLIKGFVDIMDRNGVDEVLKLMEEFNVKPDV 115

Query: 25  ITFSTIMN 2
           ITFSTIMN
Sbjct: 116 ITFSTIMN 123


>ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Glycine max]
          Length = 621

 Score =  110 bits (275), Expect = 1e-22
 Identities = 51/68 (75%), Positives = 58/68 (85%)
 Frame = -3

Query: 205 CKEGNMDDALRFVYRMKEFKVHPNLVVFNSLIKGFVDLTDAGGVDEVLVLMEEYQVKPDV 26
           CKEGNM +ALRF+YRMKE  VHPN VVFNSLIKG++D TD  GVDE L LMEE+ +KPDV
Sbjct: 282 CKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTNGVDEALTLMEEFGIKPDV 341

Query: 25  ITFSTIMN 2
           +TFSTIMN
Sbjct: 342 VTFSTIMN 349


>gb|AFK38512.1| unknown [Medicago truncatula]
          Length = 249

 Score =  107 bits (267), Expect = 1e-21
 Identities = 48/68 (70%), Positives = 59/68 (86%)
 Frame = -3

Query: 205 CKEGNMDDALRFVYRMKEFKVHPNLVVFNSLIKGFVDLTDAGGVDEVLVLMEEYQVKPDV 26
           CKEGNM +ALRF+Y+MKE  VHPN VVFNSLIKG++D+TD  GV+E L LMEE+ +KPDV
Sbjct: 100 CKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDV 159

Query: 25  ITFSTIMN 2
           +T+STIMN
Sbjct: 160 VTYSTIMN 167