BLASTX nr result

ID: Coptis21_contig00021961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021961
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523757.1| eukaryotic translation initiation factor 2c,...   105   1e-20
ref|NP_175274.1| protein argonaute [Arabidopsis thaliana] gi|113...   105   1e-20
ref|XP_002978905.1| hypothetical protein SELMODRAFT_110151 [Sela...   102   1e-19
ref|XP_002984845.1| hypothetical protein SELMODRAFT_181346 [Sela...   102   1e-19
gb|AFV46191.1| argonaute1-2, partial [Solanum lycopersicum]           101   2e-19

>ref|XP_002523757.1| eukaryotic translation initiation factor 2c, putative [Ricinus
           communis] gi|223537061|gb|EEF38697.1| eukaryotic
           translation initiation factor 2c, putative [Ricinus
           communis]
          Length = 987

 Score =  105 bits (263), Expect = 1e-20
 Identities = 51/92 (55%), Positives = 63/92 (68%)
 Frame = +3

Query: 249 QREFKVAIKFVAQPNXXXXXXXXXXXXADAPQEALKALDVVLKELPSNNYIVVGSSSFSP 428
           +REFKVAIKF ++P+             D PQE ++ LD+VL+E PS  Y  VG S FSP
Sbjct: 242 EREFKVAIKFASKPDIHHLKQFLIGRQMDCPQETIQVLDIVLRETPSEKYTPVGRSFFSP 301

Query: 429 KLGQKSDIGDGLECWKGCYQSLRLTQMGLSLN 524
            LGQK ++GDG+E W+G YQSLR TQMGLSLN
Sbjct: 302 DLGQKGELGDGIEYWRGYYQSLRPTQMGLSLN 333


>ref|NP_175274.1| protein argonaute [Arabidopsis thaliana]
           gi|11386626|sp|O04379.1|AGO1_ARATH RecName: Full=Protein
           argonaute 1 gi|5733867|gb|AAD49755.1|AC007932_3
           Identical to Argonaute protein from Arabidopsis thaliana
           gb|U91995. EST gb|AA720232 comes from this gene
           [Arabidopsis thaliana] gi|2149640|gb|AAC18440.1|
           Argonaute protein [Arabidopsis thaliana]
           gi|24030354|gb|AAN41341.1| putative leaf development
           protein Argonaute [Arabidopsis thaliana]
           gi|332194166|gb|AEE32287.1| protein argonaute
           [Arabidopsis thaliana]
          Length = 1048

 Score =  105 bits (262), Expect = 1e-20
 Identities = 51/92 (55%), Positives = 66/92 (71%)
 Frame = +3

Query: 249 QREFKVAIKFVAQPNXXXXXXXXXXXXADAPQEALKALDVVLKELPSNNYIVVGSSSFSP 428
           +REFKV IK VA+ +            +DAPQEAL+ LD+VL+ELP++ YI VG S +SP
Sbjct: 284 EREFKVVIKLVARADLHHLGMFLEGKQSDAPQEALQVLDIVLRELPTSRYIPVGRSFYSP 343

Query: 429 KLGQKSDIGDGLECWKGCYQSLRLTQMGLSLN 524
            +G+K  +GDGLE W+G YQS+R TQMGLSLN
Sbjct: 344 DIGKKQSLGDGLESWRGFYQSIRPTQMGLSLN 375


>ref|XP_002978905.1| hypothetical protein SELMODRAFT_110151 [Selaginella moellendorffii]
           gi|300153223|gb|EFJ19862.1| hypothetical protein
           SELMODRAFT_110151 [Selaginella moellendorffii]
          Length = 955

 Score =  102 bits (254), Expect = 1e-19
 Identities = 50/91 (54%), Positives = 64/91 (70%)
 Frame = +3

Query: 252 REFKVAIKFVAQPNXXXXXXXXXXXXADAPQEALKALDVVLKELPSNNYIVVGSSSFSPK 431
           R+FKV IKF A+ +            ADAPQEAL+ LD+VL+ELP++ Y  VG S +SP 
Sbjct: 203 RQFKVVIKFAARADLHHLGQFLAGRQADAPQEALQVLDIVLRELPTHRYSPVGRSFYSPD 262

Query: 432 LGQKSDIGDGLECWKGCYQSLRLTQMGLSLN 524
           LG++  +GDGLE W+G YQS+R TQMGLSLN
Sbjct: 263 LGRRQPLGDGLESWRGFYQSIRPTQMGLSLN 293


>ref|XP_002984845.1| hypothetical protein SELMODRAFT_181346 [Selaginella moellendorffii]
           gi|300147431|gb|EFJ14095.1| hypothetical protein
           SELMODRAFT_181346 [Selaginella moellendorffii]
          Length = 955

 Score =  102 bits (254), Expect = 1e-19
 Identities = 50/91 (54%), Positives = 64/91 (70%)
 Frame = +3

Query: 252 REFKVAIKFVAQPNXXXXXXXXXXXXADAPQEALKALDVVLKELPSNNYIVVGSSSFSPK 431
           R+FKV IKF A+ +            ADAPQEAL+ LD+VL+ELP++ Y  VG S +SP 
Sbjct: 203 RQFKVVIKFAARADLHHLGQFLAGRQADAPQEALQVLDIVLRELPTHRYSPVGRSFYSPD 262

Query: 432 LGQKSDIGDGLECWKGCYQSLRLTQMGLSLN 524
           LG++  +GDGLE W+G YQS+R TQMGLSLN
Sbjct: 263 LGRRQPLGDGLESWRGFYQSIRPTQMGLSLN 293


>gb|AFV46191.1| argonaute1-2, partial [Solanum lycopersicum]
          Length = 1152

 Score =  101 bits (252), Expect = 2e-19
 Identities = 49/91 (53%), Positives = 64/91 (70%)
 Frame = +3

Query: 252 REFKVAIKFVAQPNXXXXXXXXXXXXADAPQEALKALDVVLKELPSNNYIVVGSSSFSPK 431
           REFKV IKF ++ +            ADAPQEAL+ LD+VL+ELP++ Y  VG S +SP 
Sbjct: 386 REFKVVIKFASRADLHHLGMFLEGRQADAPQEALQVLDIVLRELPTSKYCPVGRSFYSPN 445

Query: 432 LGQKSDIGDGLECWKGCYQSLRLTQMGLSLN 524
           LG++  +G+GLE W+G YQS+R TQMGLSLN
Sbjct: 446 LGRRQPLGEGLESWRGFYQSIRPTQMGLSLN 476


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