BLASTX nr result

ID: Coptis21_contig00021959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021959
         (678 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002312768.1| predicted protein [Populus trichocarpa] gi|2...   197   2e-48
ref|XP_002280505.2| PREDICTED: formin-like protein 8-like [Vitis...   192   7e-47
emb|CBI15099.3| unnamed protein product [Vitis vinifera]              192   7e-47
emb|CBI32075.3| unnamed protein product [Vitis vinifera]              189   3e-46
ref|XP_002520202.1| actin binding protein, putative [Ricinus com...   189   6e-46

>ref|XP_002312768.1| predicted protein [Populus trichocarpa] gi|222852588|gb|EEE90135.1|
            predicted protein [Populus trichocarpa]
          Length = 760

 Score =  197 bits (500), Expect = 2e-48
 Identities = 103/168 (61%), Positives = 123/168 (73%), Gaps = 1/168 (0%)
 Frame = +2

Query: 59   YMMLGLPVVGGLSVDFSNVKKAATVDYDSFVSMCSALTARVNEIRQLLARMNDGKGVG-F 235
            YMMLGLP VGGLS++FSNVKKAA +DYD+F + CSAL     E+R  +++     G G F
Sbjct: 580  YMMLGLPAVGGLSIEFSNVKKAAQIDYDTFAATCSALATGAREVRAFMSQCAAANGEGGF 639

Query: 236  VREMKNFLESAEEELKVVQEEQTRVMDLVKRTTEYYEAGVSKDKTAHPFQLFVRIKDFLG 415
            VREMK FLE+AEEELK + +EQTRVMDLVK+TTEYY AG SKD+ AH  QLF  IKDFL 
Sbjct: 640  VREMKGFLEAAEEELKGLTKEQTRVMDLVKKTTEYYHAGASKDQEAHALQLFSIIKDFLC 699

Query: 416  MVDQACIDITRNQQKKRATMIKVGSSSPPQSAALRARASFPNLPAHFM 559
            MVDQ CI+ITRN Q+++ +   V SS  P+S A R    FPNLP HFM
Sbjct: 700  MVDQVCIEITRNLQRRKTSSRSVESS--PKSPASRIPVRFPNLPQHFM 745


>ref|XP_002280505.2| PREDICTED: formin-like protein 8-like [Vitis vinifera]
          Length = 734

 Score =  192 bits (487), Expect = 7e-47
 Identities = 103/167 (61%), Positives = 122/167 (73%)
 Frame = +2

Query: 59   YMMLGLPVVGGLSVDFSNVKKAATVDYDSFVSMCSALTARVNEIRQLLARMNDGKGVGFV 238
            Y+MLGLPV+GGLS +F NVKKAA +D+D+F++MCS LTARV EI+ L+A  ++G+   FV
Sbjct: 555  YLMLGLPVLGGLSTEFYNVKKAAVIDHDTFINMCSTLTARVAEIQLLVASCSNGEKGRFV 614

Query: 239  REMKNFLESAEEELKVVQEEQTRVMDLVKRTTEYYEAGVSKDKTAHPFQLFVRIKDFLGM 418
            +EMK FLE  EEELKVV+ EQTRVM+LVKRTTEYY+AG SKDK   P QLF+ +KDFL M
Sbjct: 615  QEMKGFLEECEEELKVVRVEQTRVMELVKRTTEYYQAGASKDKGGQPLQLFLIVKDFLDM 674

Query: 419  VDQACIDITRNQQKKRATMIKVGSSSPPQSAALRARASFPNLPAHFM 559
            VDQAC DI R  QKK  T  K   SSPP S   R    F NL   FM
Sbjct: 675  VDQACQDIYRRLQKKNVT--KTVGSSPPLSPT-RQAVRFTNLQLQFM 718


>emb|CBI15099.3| unnamed protein product [Vitis vinifera]
          Length = 1369

 Score =  192 bits (487), Expect = 7e-47
 Identities = 103/167 (61%), Positives = 122/167 (73%)
 Frame = +2

Query: 59   YMMLGLPVVGGLSVDFSNVKKAATVDYDSFVSMCSALTARVNEIRQLLARMNDGKGVGFV 238
            Y+MLGLPV+GGLS +F NVKKAA +D+D+F++MCS LTARV EI+ L+A  ++G+   FV
Sbjct: 703  YLMLGLPVLGGLSTEFYNVKKAAVIDHDTFINMCSTLTARVAEIQLLVASCSNGEKGRFV 762

Query: 239  REMKNFLESAEEELKVVQEEQTRVMDLVKRTTEYYEAGVSKDKTAHPFQLFVRIKDFLGM 418
            +EMK FLE  EEELKVV+ EQTRVM+LVKRTTEYY+AG SKDK   P QLF+ +KDFL M
Sbjct: 763  QEMKGFLEECEEELKVVRVEQTRVMELVKRTTEYYQAGASKDKGGQPLQLFLIVKDFLDM 822

Query: 419  VDQACIDITRNQQKKRATMIKVGSSSPPQSAALRARASFPNLPAHFM 559
            VDQAC DI R  QKK  T  K   SSPP S   R    F NL   FM
Sbjct: 823  VDQACQDIYRRLQKKNVT--KTVGSSPPLSPT-RQAVRFTNLQLQFM 866


>emb|CBI32075.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  189 bits (481), Expect = 3e-46
 Identities = 96/169 (56%), Positives = 128/169 (75%), Gaps = 2/169 (1%)
 Frame = +2

Query: 59   YMMLGLPVVGGLSVDFSNVKKAATVDYDSFVSMCSALTARVNEIRQLLARMNDGKGVGFV 238
            Y+M+GLPVVGGLS +FSNVKKAA +DY++F  +CS LTA   EI+Q +A+  +  G GF+
Sbjct: 545  YIMIGLPVVGGLSAEFSNVKKAAVIDYNAFAGVCSTLTAHSTEIKQFVAQFANSDG-GFL 603

Query: 239  REMKNFLESAEEELKVVQEEQTRVMDLVKRTTEYYEAGVSKDKTAHPFQLFVRIKDFLGM 418
            R+MK+FL++++EEL+ V+EEQTRVM+LV+RTTEYY+   SK+K A P QLFV +K+FLGM
Sbjct: 604  RKMKSFLKASDEELREVREEQTRVMELVRRTTEYYQPRSSKNKEASPVQLFVIVKNFLGM 663

Query: 419  VDQACIDITRNQQKKRATMIKVGSS--SPPQSAALRARASFPNLPAHFM 559
            VDQ C+DI RN Q+++ T   +GSS  SPP     R    FPNLP +FM
Sbjct: 664  VDQVCVDIARNLQRRKTTTASLGSSTKSPPS----RIPVKFPNLPPNFM 708


>ref|XP_002520202.1| actin binding protein, putative [Ricinus communis]
            gi|223540694|gb|EEF42257.1| actin binding protein,
            putative [Ricinus communis]
          Length = 849

 Score =  189 bits (479), Expect = 6e-46
 Identities = 100/168 (59%), Positives = 124/168 (73%), Gaps = 1/168 (0%)
 Frame = +2

Query: 59   YMMLGLPVVGGLSVDFSNVKKAATVDYDSFVSMCSALTARVNEIRQLLARMNDGKGVG-F 235
            Y+MLGLP+VGGLS +FSNVKKAA +DY+SF    SALTARV E+R L+A      G G F
Sbjct: 670  YIMLGLPMVGGLSAEFSNVKKAAQIDYNSFAGTYSALTARVAEVR-LIASQCAANGEGNF 728

Query: 236  VREMKNFLESAEEELKVVQEEQTRVMDLVKRTTEYYEAGVSKDKTAHPFQLFVRIKDFLG 415
              EMK+F+E+AE ELKV++EE+ R+M+LV++TTEYY+AG SK K A P QLF  IKDFLG
Sbjct: 729  ANEMKSFVEAAEYELKVLREEENRIMELVRKTTEYYQAGASKKKGAPPLQLFAIIKDFLG 788

Query: 416  MVDQACIDITRNQQKKRATMIKVGSSSPPQSAALRARASFPNLPAHFM 559
            MVD+ CI+ITRN Q+++      GSS  P+S A R    FPNLP HFM
Sbjct: 789  MVDRVCIEITRNMQRRKTPSPNFGSS--PKSPASRVPVKFPNLPEHFM 834


Top