BLASTX nr result

ID: Coptis21_contig00021956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021956
         (1146 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330316.1| predicted protein [Populus trichocarpa] gi|2...   404   e-110
ref|XP_002313836.1| predicted protein [Populus trichocarpa] gi|2...   400   e-109
emb|CAN81421.1| hypothetical protein VITISV_035941 [Vitis vinifera]   389   e-105
ref|XP_002281840.1| PREDICTED: armadillo repeat-containing prote...   387   e-105
ref|XP_002521847.1| Armadillo repeat-containing protein, putativ...   384   e-104

>ref|XP_002330316.1| predicted protein [Populus trichocarpa] gi|222871351|gb|EEF08482.1|
            predicted protein [Populus trichocarpa]
          Length = 461

 Score =  404 bits (1038), Expect = e-110
 Identities = 208/332 (62%), Positives = 269/332 (81%), Gaps = 1/332 (0%)
 Frame = +1

Query: 154  MGPSKNNNKRTISQEAFELLVKENIEDLDMDPNEALQDAIHTLTLQGVDLYGIVTCIPGV 333
            MGP  + N RTISQEAF+ LVKENIEDL +DP EAL+DAI TLTLQGVDL GIVTC+PG 
Sbjct: 1    MGPP-SKNVRTISQEAFDELVKENIEDLGLDPTEALEDAIQTLTLQGVDLSGIVTCVPGE 59

Query: 334  TSVNDNPVIQCLDQLKELVDHNDSNLEEIVNVLDNLCNLCSVQDSSSNVSIAMRNGGLDL 513
             +V +NPVI+CL++LKEL   +D +L+E+V +LD L  L +  + S NV+I +RNGGL+L
Sbjct: 60   GNVRENPVIKCLERLKEL-GFDDDDLDEMVGLLDELVGLFTGVEGSGNVAIGVRNGGLEL 118

Query: 514  LISICSKFKL-GQRVLVSAFKAMSVLITDIQSTEIFRKNDGPKIVMAILSECSEKIDVVN 690
            + SICS   +  ++VLVSA K +++LI D+QSTE+FR +DGPK+V+ IL   SE ++V+N
Sbjct: 119  VCSICSNIPIVSEKVLVSALKTLALLIHDVQSTEMFRSSDGPKMVVGILKGGSESLEVLN 178

Query: 691  SGFAVVAAAATGNEVVKDSFMDLKVDELLVQILGGKNKDGLRHPYDAIRVLLTADDGRVL 870
            +GFAVVAAAATGNEVVK+  ++LK+DEL++++L  ++K  ++  YD+IRVLLT DD RV+
Sbjct: 179  TGFAVVAAAATGNEVVKELLIELKIDELILEVLNRQSKGIIQGLYDSIRVLLTPDDNRVV 238

Query: 871  ASQVYGYARTFAKIGITEALVGALHQGISSPNLISATIALKAVAVNDEICRSIADNGGVD 1050
            ASQVYGYAR FAKIGI  ALV +L  G++SP+L+SA+IALKAVAVNDEIC+SIA++GG+D
Sbjct: 239  ASQVYGYARRFAKIGIARALVESLRSGLTSPSLVSASIALKAVAVNDEICKSIAESGGID 298

Query: 1051 AVLKCIDDSGEQSNSAVARACCSLLSKLAGSD 1146
             + KCIDDSGE  N  VARACCSLLSKLAGSD
Sbjct: 299  VIFKCIDDSGEHGNKIVARACCSLLSKLAGSD 330


>ref|XP_002313836.1| predicted protein [Populus trichocarpa] gi|222850244|gb|EEE87791.1|
            predicted protein [Populus trichocarpa]
          Length = 453

 Score =  400 bits (1028), Expect = e-109
 Identities = 209/333 (62%), Positives = 266/333 (79%), Gaps = 2/333 (0%)
 Frame = +1

Query: 154  MGPSKNNNKRTISQEAFELLVKENIEDLDMDPNEALQDAIHTLTLQGVDLYGIVTCIPGV 333
            MGP  + N RTISQEAF+ LVKENIEDL MDP EAL+DAI TLTLQGVDL GIVTC+PG 
Sbjct: 1    MGPP-SKNARTISQEAFDELVKENIEDLGMDPTEALEDAIQTLTLQGVDLSGIVTCVPGE 59

Query: 334  TSVNDNPVIQCLDQLKEL-VDHNDSNLEEIVNVLDNLCNLCSVQDSSSNVSIAMRNGGLD 510
             +V +NPVI+CL++L+EL  D+N SN  E+  + D L  L S  + S NV+I +RNGG++
Sbjct: 60   GNVRENPVIKCLERLEELGFDNNGSN--EMAGLFDQLAGLFSGVEGSGNVAIGVRNGGVE 117

Query: 511  LLISICSKFKLG-QRVLVSAFKAMSVLITDIQSTEIFRKNDGPKIVMAILSECSEKIDVV 687
            L+ SICS   +G ++VLVSA + +++LI D+QSTE FR +DGPK+V+ IL + SE +D++
Sbjct: 118  LVCSICSNIPIGSEKVLVSALETLALLIHDVQSTETFRSSDGPKMVVDILKDGSESLDIL 177

Query: 688  NSGFAVVAAAATGNEVVKDSFMDLKVDELLVQILGGKNKDGLRHPYDAIRVLLTADDGRV 867
            NSGFAVVAAAAT NEVVK+ FM+LK+DEL+++ L  ++K  +R  YD+IRVLLT DD RV
Sbjct: 178  NSGFAVVAAAATSNEVVKELFMELKIDELILEALNRQSKGNIRGLYDSIRVLLTPDDNRV 237

Query: 868  LASQVYGYARTFAKIGITEALVGALHQGISSPNLISATIALKAVAVNDEICRSIADNGGV 1047
            +ASQVYGYAR FAKIGI  ALV +L  G++SP+L+SA+IALKAVAVNDEIC+SI ++GG+
Sbjct: 238  VASQVYGYARRFAKIGIARALVESLRAGLTSPSLVSASIALKAVAVNDEICKSITESGGI 297

Query: 1048 DAVLKCIDDSGEQSNSAVARACCSLLSKLAGSD 1146
            DA+LK IDDSGEQ N  VA+ CCSLLSKLAG D
Sbjct: 298  DAILKFIDDSGEQGNKIVAKTCCSLLSKLAGCD 330


>emb|CAN81421.1| hypothetical protein VITISV_035941 [Vitis vinifera]
          Length = 449

 Score =  389 bits (998), Expect = e-105
 Identities = 200/325 (61%), Positives = 255/325 (78%), Gaps = 3/325 (0%)
 Frame = +1

Query: 181  RTISQEAFELLVKENIEDLDMDPNEALQDAIHTLTLQGVDLYGIVTCIPGVTSVNDNPVI 360
            RTISQ AF+ LV+EN+EDL MDP EAL+DA+ TLTLQGVDL GIV C+PG  SV DNPVI
Sbjct: 8    RTISQAAFDELVRENMEDLGMDPAEALEDALQTLTLQGVDLSGIVACVPGDGSVGDNPVI 67

Query: 361  QCLDQLKELVDHNDSNLEEIVNVLDNLCNLCSVQDSSSNVSIAMRNGGLDLLISICSKFK 540
            Q LD+L +L D +     E+V V D L  LCS++  S N +IA RNGG++++ S+CSK +
Sbjct: 68   QSLDRLNQL-DSDRGGFGEMVEVFDKLTELCSIE-GSGNAAIATRNGGVEVVCSVCSKIR 125

Query: 541  LG---QRVLVSAFKAMSVLITDIQSTEIFRKNDGPKIVMAILSECSEKIDVVNSGFAVVA 711
            +G     VLVS    M+ L+ D+QSTE F+K  GPKIV+ +L++ S+ +D++NSGF+VVA
Sbjct: 126  VGCEGDSVLVSGLTTMASLLHDVQSTETFQKIGGPKIVVGVLNDASQNVDILNSGFSVVA 185

Query: 712  AAATGNEVVKDSFMDLKVDELLVQILGGKNKDGLRHPYDAIRVLLTADDGRVLASQVYGY 891
            AAATGNE++K+SFMDL++DEL++QI+    +  +   YDAI VLLT DD RV+ASQVYGY
Sbjct: 186  AAATGNEILKESFMDLQIDELIIQIMKSHGRGRVHSIYDAICVLLTPDDNRVVASQVYGY 245

Query: 892  ARTFAKIGITEALVGALHQGISSPNLISATIALKAVAVNDEICRSIADNGGVDAVLKCID 1071
            AR FAK GI  ALV +L +G+ SP+L+SA+IALKAVAVNDEIC+SIA++GG+DAVL+CID
Sbjct: 246  ARRFAKAGIAGALVESLGEGLRSPSLVSASIALKAVAVNDEICKSIAESGGIDAVLRCID 305

Query: 1072 DSGEQSNSAVARACCSLLSKLAGSD 1146
            DSGEQ N  VARACCSLLSKLAGSD
Sbjct: 306  DSGEQGNKTVARACCSLLSKLAGSD 330


>ref|XP_002281840.1| PREDICTED: armadillo repeat-containing protein 6 [Vitis vinifera]
            gi|297741329|emb|CBI32460.3| unnamed protein product
            [Vitis vinifera]
          Length = 460

 Score =  387 bits (995), Expect = e-105
 Identities = 200/325 (61%), Positives = 256/325 (78%), Gaps = 3/325 (0%)
 Frame = +1

Query: 181  RTISQEAFELLVKENIEDLDMDPNEALQDAIHTLTLQGVDLYGIVTCIPGVTSVNDNPVI 360
            RTISQ AF+ LV+EN+EDL M+P EAL+DA+ TLTLQGVDL GIV C+PG  SV DNPVI
Sbjct: 8    RTISQAAFDELVRENMEDLGMEPAEALEDALQTLTLQGVDLSGIVACVPGDGSVGDNPVI 67

Query: 361  QCLDQLKELVDHNDSNLEEIVNVLDNLCNLCSVQDSSSNVSIAMRNGGLDLLISICSKFK 540
            Q LD+LK+L D +     E+V V D L  LCS++  S N +IA RNGG++++ S+CSK +
Sbjct: 68   QSLDRLKQL-DSDWVGFGEMVEVFDKLTELCSIE-GSDNAAIATRNGGVEVVCSVCSKIR 125

Query: 541  LG---QRVLVSAFKAMSVLITDIQSTEIFRKNDGPKIVMAILSECSEKIDVVNSGFAVVA 711
            +G     VLVS    M+ L+ D+QSTE F+K  GPKIV+ +L++ S+ +D++NSGF+VVA
Sbjct: 126  VGCEGDSVLVSGLTTMASLLHDVQSTETFQKIGGPKIVVGVLNDASQNVDILNSGFSVVA 185

Query: 712  AAATGNEVVKDSFMDLKVDELLVQILGGKNKDGLRHPYDAIRVLLTADDGRVLASQVYGY 891
            AAATGNE++K+SFMDL++DEL++QI+    +  +   YDAI VLLT DD RV+ASQVYGY
Sbjct: 186  AAATGNEILKESFMDLQIDELIIQIMKSHGRGRVHSIYDAICVLLTPDDNRVVASQVYGY 245

Query: 892  ARTFAKIGITEALVGALHQGISSPNLISATIALKAVAVNDEICRSIADNGGVDAVLKCID 1071
            AR FAK GI  ALV +L +G+ SP+L+SA+IALKAVAVNDEIC+SIA++GG+DAVL+CID
Sbjct: 246  ARRFAKAGIAGALVESLGEGLRSPSLVSASIALKAVAVNDEICKSIAESGGIDAVLRCID 305

Query: 1072 DSGEQSNSAVARACCSLLSKLAGSD 1146
            DSGEQ N  VARACCSLLSKLAGSD
Sbjct: 306  DSGEQGNKTVARACCSLLSKLAGSD 330


>ref|XP_002521847.1| Armadillo repeat-containing protein, putative [Ricinus communis]
            gi|223538885|gb|EEF40483.1| Armadillo repeat-containing
            protein, putative [Ricinus communis]
          Length = 719

 Score =  384 bits (985), Expect = e-104
 Identities = 202/339 (59%), Positives = 263/339 (77%), Gaps = 7/339 (2%)
 Frame = +1

Query: 151  KMGPSKNNNKRTISQEAFELLVKENIEDLDMDPNEALQDAIHTLTLQGVDLYGIVTCIPG 330
            +MGP  N N RTISQEAF+ LVKEN+E+L MDP EAL+DA+ TL LQGVDL GIVTC+PG
Sbjct: 239  EMGPP-NKNARTISQEAFDELVKENMEELGMDPTEALEDAMQTLNLQGVDLSGIVTCVPG 297

Query: 331  VTSVNDNPVIQCLDQLKEL----VDHNDSN--LEEIVNVLDNLCNLCSVQDSSSNVSIAM 492
             ++ +DNPV+QCL +LKE+    +D   S   + EI  + D L  L +  ++S+NV+I +
Sbjct: 298  ESNASDNPVMQCLGRLKEIDSISIDPISSYDYISEIGELFDKLIGLST--EASANVAIGV 355

Query: 493  RNGGLDLLISICSKF-KLGQRVLVSAFKAMSVLITDIQSTEIFRKNDGPKIVMAILSECS 669
            +NGG+ L+ SICSK     + VLV   KA+++ + D+QSTE FR + G  I+  IL   +
Sbjct: 356  KNGGIQLVCSICSKIPNQFKAVLVVGLKALALFLYDVQSTETFRSSGGATILAGILKNGN 415

Query: 670  EKIDVVNSGFAVVAAAATGNEVVKDSFMDLKVDELLVQILGGKNKDGLRHPYDAIRVLLT 849
            E ID+++SGF+VVAAAATGNE++K+SFM+LKVDEL++Q L G++K  +++ YDAIRVLLT
Sbjct: 416  ENIDILDSGFSVVAAAATGNEILKESFMELKVDELILQALNGQHKGSIQNLYDAIRVLLT 475

Query: 850  ADDGRVLASQVYGYARTFAKIGITEALVGALHQGISSPNLISATIALKAVAVNDEICRSI 1029
             DD R++ASQVYGYAR FAKIGI  ALV +LH G++SP+L+SA IALKAVAVNDEIC+SI
Sbjct: 476  PDDDRIVASQVYGYARRFAKIGIAGALVESLHGGLTSPSLVSACIALKAVAVNDEICKSI 535

Query: 1030 ADNGGVDAVLKCIDDSGEQSNSAVARACCSLLSKLAGSD 1146
            A+ GG+DA+L+CIDDSGEQ N  VAR CCSLLSKLAGSD
Sbjct: 536  AERGGIDAILQCIDDSGEQGNKTVARTCCSLLSKLAGSD 574


Top