BLASTX nr result

ID: Coptis21_contig00021953 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021953
         (1220 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254...   219   8e-55
emb|CBI23652.3| unnamed protein product [Vitis vinifera]              203   8e-50
ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinu...   181   3e-43
ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228...   173   7e-41
ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220...   173   7e-41

>ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
          Length = 1082

 Score =  219 bits (559), Expect = 8e-55
 Identities = 131/294 (44%), Positives = 175/294 (59%), Gaps = 19/294 (6%)
 Frame = +3

Query: 3    ALQYALKPVITSAPQPVMTXXXXXXXXXXXXXXXXXT-------PVFSKSVIDSLKKTNE 161
            ALQ ALKPVIT++PQ                             PVFS+SVIDSLKKTNE
Sbjct: 761  ALQNALKPVITASPQTAPPPPPQPAFSRPVSPYSRRPSPPRSAGPVFSRSVIDSLKKTNE 820

Query: 162  LLNQEVLKLQSQVKTLSQKCEIQDNELLKSQQKAQEAVSVAAQESSKGIVAKELIKSIAS 341
            LLNQEV KLQ+QV++L QK E QD E+ K ++ AQEA  +A +ESSK  VAKE++KSI +
Sbjct: 821  LLNQEVTKLQNQVRSLKQKSEGQDAEIQKLRKNAQEADLLALEESSKCTVAKEVVKSITT 880

Query: 342  QLKDMTENLSPEICDSENFKAMHTEIEFLMRIDGNEASEVSSSFPANSPEHGQQEKMVDP 521
            QLK+M + L PE+ DSE FK+M T+IE  +   G +A+E SSS PA+     +   + +P
Sbjct: 881  QLKEMEKQLPPEVYDSETFKSMQTQIEAFLNTSGTQAAEFSSSLPADLESDQKNAPVTNP 940

Query: 522  ------SDSTGVADLSQSAE-----DDGTSVPDNKEVVRHQSVEDVSRYPSISELK-EET 665
                   ++ G+ DL+Q+ E         S+   ++ V  QS E+ SR  +  E + E T
Sbjct: 941  LGVEDHVNAAGLTDLTQNGESSVQDSSKLSISITRDAVPQQSTENGSRSAAKYEGEPEST 1000

Query: 666  EQFEPGVYITFIQLRTGTXXXXXXXXXXXXYSGQQAEDWWRENKDRVFVKYRPP 827
            EQFEPGVY+TFI L+ GT            + GQQAE+WW+ENK+R+  KY PP
Sbjct: 1001 EQFEPGVYVTFIALKNGTKIFKRVRFSKRKFGGQQAEEWWKENKERLLRKYTPP 1054


>emb|CBI23652.3| unnamed protein product [Vitis vinifera]
          Length = 1062

 Score =  203 bits (516), Expect = 8e-50
 Identities = 127/300 (42%), Positives = 167/300 (55%), Gaps = 25/300 (8%)
 Frame = +3

Query: 3    ALQYALKPVITSAPQPVMTXXXXXXXXXXXXXXXXXT-------PVFSKSVIDSLKKTNE 161
            ALQ ALKPVIT++PQ                             PVFS+SVIDSLKKTNE
Sbjct: 758  ALQNALKPVITASPQTAPPPPPQPAFSRPVSPYSRRPSPPRSAGPVFSRSVIDSLKKTNE 817

Query: 162  LLNQEVLKLQSQVKTLSQKCEIQDNELLKSQQKAQEAVSVAAQESSKGIVAKELIKSIAS 341
            LLNQEV KLQ+QV++L QK E QD E+ K ++ AQEA  +A +ESSK  VAKE++KSI +
Sbjct: 818  LLNQEVTKLQNQVRSLKQKSEGQDAEIQKLRKNAQEADLLALEESSKCTVAKEVVKSITT 877

Query: 342  Q------------LKDMTENLSPEICDSENFKAMHTEIEFLMRIDGNEASEVSSSFPANS 485
            Q            LK+M + L PE+ DSE FK+M T+IE  +   G +A+E SSS PA+ 
Sbjct: 878  QDYLESAHESTNLLKEMEKQLPPEVYDSETFKSMQTQIEAFLNTSGTQAAEFSSSLPADL 937

Query: 486  PEHGQQEKMVDP------SDSTGVADLSQSAEDDGTSVPDNKEVVRHQSVEDVSRYPSIS 647
                +   + +P       ++ G+ DL+Q+ E   +SV D+K                  
Sbjct: 938  ESDQKNAPVTNPLGVEDHVNAAGLTDLTQNGE---SSVQDSK------------------ 976

Query: 648  ELKEETEQFEPGVYITFIQLRTGTXXXXXXXXXXXXYSGQQAEDWWRENKDRVFVKYRPP 827
               E TEQFEPGVY+TFI L+ GT            + GQQAE+WW+ENK+R+  KY PP
Sbjct: 977  --PESTEQFEPGVYVTFIALKNGTKIFKRVRFSKRKFGGQQAEEWWKENKERLLRKYTPP 1034


>ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
            gi|223526683|gb|EEF28920.1| Ran GTPase binding protein,
            putative [Ricinus communis]
          Length = 1097

 Score =  181 bits (459), Expect = 3e-43
 Identities = 116/292 (39%), Positives = 159/292 (54%), Gaps = 17/292 (5%)
 Frame = +3

Query: 3    ALQYALKPVIT-------SAPQPVMTXXXXXXXXXXXXXXXXXTPVFSKSVIDSLKKTNE 161
            A+Q A KPV +       ++PQP+                   +P FS+SVIDSLKKTNE
Sbjct: 762  AIQNAWKPVSSPVSLSPLNSPQPMGNSRPASPYSRRPSPPRISSPGFSRSVIDSLKKTNE 821

Query: 162  LLNQEVLKLQSQVKTLSQKCEIQDNELLKSQQKAQEAVSVAAQESSKGIVAKELIKSIAS 341
            +L  ++ K+Q+Q+KT  QKC+ Q+ E+ K Q++A E    A +E+SK  VAKEL+KS+A 
Sbjct: 822  ILKNDMTKVQNQMKTFKQKCDAQETEIQKLQKEANETALSAKREASKCRVAKELVKSLAE 881

Query: 342  QLKDMTENLSPEICDSENFKAMHTEIE-FLMRIDGNEASEVSSSF-----PANSPEHGQQ 503
            QLK+MT  L P+I D+E FKAM+ +IE FL   + +E+S V+ S       A+      Q
Sbjct: 882  QLKEMTVQLPPDIQDNETFKAMNGQIETFLHIYETSESSSVAESLMSGQKRASDTTSNMQ 941

Query: 504  EKMVDPSDSTGVADLSQSAEDDGTSVPDNKEVV-RHQSVEDVSRYPSISELKEE---TEQ 671
            E  ++   +    D S   +    SV  N E V  H S E  SR    S  K+E    EQ
Sbjct: 942  ENRIEYQATDLSHDGSVPQDSHRLSVSSNPETVPHHNSSEHESRSHDASTSKKEGESIEQ 1001

Query: 672  FEPGVYITFIQLRTGTXXXXXXXXXXXXYSGQQAEDWWRENKDRVFVKYRPP 827
            FEPGVY+TF+Q   G             +  QQAE WW+ENKDR+  +Y PP
Sbjct: 1002 FEPGVYVTFVQRSNGVKIFKRVKFSKRRFQEQQAEVWWKENKDRLLRRYSPP 1053


>ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
            sativus]
          Length = 958

 Score =  173 bits (439), Expect = 7e-41
 Identities = 109/285 (38%), Positives = 154/285 (54%), Gaps = 11/285 (3%)
 Frame = +3

Query: 3    ALQYALKPVITS--APQPVMTXXXXXXXXXXXXXXXXXTPVFSKSVIDSLKKTNELLNQE 176
            A+Q AL+P + +  +P P+                   TPVFSKSVIDSLKK+NE L Q+
Sbjct: 626  AIQNALRPALVAPPSPPPMGNSRPASPYARRPSPPRSTTPVFSKSVIDSLKKSNETLVQD 685

Query: 177  VLKLQSQVKTLSQKCEIQDNELLKSQQKAQEAVSVAAQESSKGIVAKELIKSIASQLKDM 356
              KLQ +VK L QKC+IQ  E+   Q+ A EA S+  +ESSK  +AK+L+ +I  QLK+M
Sbjct: 686  KSKLQREVKNLKQKCDIQGAEIQNLQKNATEAASLVEEESSKCKIAKKLVTTITEQLKEM 745

Query: 357  TENLSPEICDSENFKAMHTEIE-FLMRIDGNEASEVSSSFPANSPEHGQQEKMVDPSDST 533
             + L PEI D ENFK+M+ + E FL  ++ ++ S + +S      E       ++   + 
Sbjct: 746  KDKLPPEIWDGENFKSMYAQAEAFLNMVETSKTSSLPTSH-----EKTNNLTALNNGSTP 800

Query: 534  GVADLSQSAEDDGTSVPD------NKEVVRHQSVEDVSRYP--SISELKEETEQFEPGVY 689
             + D S+  EDDG+   D      N  +   ++ E+ SR P  S    K+  EQFEPGVY
Sbjct: 801  SLDDSSKRIEDDGSGRKDLTQENVNSLLESKKTSENGSRSPLSSTEGEKQVIEQFEPGVY 860

Query: 690  ITFIQLRTGTXXXXXXXXXXXXYSGQQAEDWWRENKDRVFVKYRP 824
             T + L  GT            +  QQAEDWW +NKDR+  +Y P
Sbjct: 861  ATLVVLSNGTKIFKRVRFSKRRFDEQQAEDWWSKNKDRLLKRYNP 905


>ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
          Length = 1075

 Score =  173 bits (439), Expect = 7e-41
 Identities = 109/285 (38%), Positives = 154/285 (54%), Gaps = 11/285 (3%)
 Frame = +3

Query: 3    ALQYALKPVITS--APQPVMTXXXXXXXXXXXXXXXXXTPVFSKSVIDSLKKTNELLNQE 176
            A+Q AL+P + +  +P P+                   TPVFSKSVIDSLKK+NE L Q+
Sbjct: 764  AIQNALRPALVAPPSPPPMGNSRPASPYARRPSPPRSTTPVFSKSVIDSLKKSNETLVQD 823

Query: 177  VLKLQSQVKTLSQKCEIQDNELLKSQQKAQEAVSVAAQESSKGIVAKELIKSIASQLKDM 356
              KLQ +VK L QKC+IQ  E+   Q+ A EA S+  +ESSK  +AK+L+ +I  QLK+M
Sbjct: 824  KSKLQREVKNLKQKCDIQGAEIQNLQKNATEAASLVEEESSKCKIAKKLVTTITEQLKEM 883

Query: 357  TENLSPEICDSENFKAMHTEIE-FLMRIDGNEASEVSSSFPANSPEHGQQEKMVDPSDST 533
             + L PEI D ENFK+M+ + E FL  ++ ++ S + +S      E       ++   + 
Sbjct: 884  KDKLPPEIWDGENFKSMYAQAEAFLNMVETSKTSSLPTSH-----EKTNNLTALNNGSTP 938

Query: 534  GVADLSQSAEDDGTSVPD------NKEVVRHQSVEDVSRYP--SISELKEETEQFEPGVY 689
             + D S+  EDDG+   D      N  +   ++ E+ SR P  S    K+  EQFEPGVY
Sbjct: 939  SLDDSSKRIEDDGSGRKDLTQENVNSLLESKKTSENGSRSPLSSTEGEKQVIEQFEPGVY 998

Query: 690  ITFIQLRTGTXXXXXXXXXXXXYSGQQAEDWWRENKDRVFVKYRP 824
             T + L  GT            +  QQAEDWW +NKDR+  +Y P
Sbjct: 999  ATLVVLSNGTKIFKRVRFSKRRFDEQQAEDWWSKNKDRLLKRYNP 1043


Top