BLASTX nr result

ID: Coptis21_contig00021949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021949
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509625.1| conserved hypothetical protein [Ricinus comm...   175   4e-42
ref|XP_002303537.1| predicted protein [Populus trichocarpa] gi|2...   169   2e-40
ref|XP_003538594.1| PREDICTED: uncharacterized protein At4g22758...   162   5e-38
ref|XP_002270898.2| PREDICTED: uncharacterized protein At4g22758...   159   3e-37
ref|XP_003516675.1| PREDICTED: uncharacterized protein At4g22758...   157   1e-36

>ref|XP_002509625.1| conserved hypothetical protein [Ricinus communis]
           gi|223549524|gb|EEF51012.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 267

 Score =  175 bits (444), Expect = 4e-42
 Identities = 93/152 (61%), Positives = 113/152 (74%)
 Frame = -3

Query: 585 YKKDAKVVVNVTVEGSPGPVKTLVKLGASVEDTIKLVVDKYSEEGRSPHIGRDGVSSFEL 406
           YKKDAKVVV VTVEGSPGPV+T+VKLG+SVEDTIKLVV KY EEGR+P + +D  SS+EL
Sbjct: 118 YKKDAKVVVTVTVEGSPGPVRTMVKLGSSVEDTIKLVVGKYCEEGRTPKLHKDVTSSYEL 177

Query: 405 HQSHFSLESLSKKGTIGDVGSRSFYLRKSCSGRSSNEGGISQLHSFSSTTGMVSVKSSTP 226
           H S+FSL+SL K   IGD+GSRSFYLR+SCS RSSN G  S   S ++  G    +   P
Sbjct: 178 HHSYFSLQSLDKSELIGDIGSRSFYLRRSCSNRSSN-GAASPSVSENAVAGENPSRPVPP 236

Query: 225 PASHFTFMSAFISRKISKIGRRMSNLWKVLVC 130
           PA     +S+FI++K+ K+ RR   LWKVLVC
Sbjct: 237 PA---FLLSSFIAKKLGKVMRRSHRLWKVLVC 265


>ref|XP_002303537.1| predicted protein [Populus trichocarpa] gi|222840969|gb|EEE78516.1|
           predicted protein [Populus trichocarpa]
          Length = 269

 Score =  169 bits (429), Expect = 2e-40
 Identities = 91/152 (59%), Positives = 108/152 (71%)
 Frame = -3

Query: 585 YKKDAKVVVNVTVEGSPGPVKTLVKLGASVEDTIKLVVDKYSEEGRSPHIGRDGVSSFEL 406
           YKKDAKVVVNVTVEGSPGPV+T+VKLG+SV+DTIKLVVDKYSEEGR+P + +D   ++EL
Sbjct: 119 YKKDAKVVVNVTVEGSPGPVRTMVKLGSSVDDTIKLVVDKYSEEGRTPKLDKDAALTYEL 178

Query: 405 HQSHFSLESLSKKGTIGDVGSRSFYLRKSCSGRSSNEGGISQLHSFSSTTGMVSVKSSTP 226
           H SHFSL+SL K   IGDVGSRSFYLR+S S RSSN G  S   S + T    +    TP
Sbjct: 179 HHSHFSLQSLDKSELIGDVGSRSFYLRRSSSNRSSNGGSTS---SIAETVSGGANLPPTP 235

Query: 225 PASHFTFMSAFISRKISKIGRRMSNLWKVLVC 130
                  +  F++ K  KI RR   LW+VLVC
Sbjct: 236 IQGPPFLLPEFLACKWGKIVRRARKLWRVLVC 267


>ref|XP_003538594.1| PREDICTED: uncharacterized protein At4g22758-like [Glycine max]
          Length = 246

 Score =  162 bits (409), Expect = 5e-38
 Identities = 87/155 (56%), Positives = 110/155 (70%)
 Frame = -3

Query: 588 RYKKDAKVVVNVTVEGSPGPVKTLVKLGASVEDTIKLVVDKYSEEGRSPHIGRDGVSSFE 409
           RY+K+AKVVVNVTVEGSPGPV+T+VKLG+SVEDTIK VVDKY+EEGRSP I  +  SSF+
Sbjct: 101 RYEKEAKVVVNVTVEGSPGPVRTMVKLGSSVEDTIKRVVDKYTEEGRSPQIDPNMASSFQ 160

Query: 408 LHQSHFSLESLSKKGTIGDVGSRSFYLRKSCSGRSSNEGGISQLHSFSSTTGMVSVKSST 229
           LH S+FSL+SL K   I DVGSRSFYLRK+    S   G   ++ +  ST  +     + 
Sbjct: 161 LHHSYFSLQSLDKSQVIADVGSRSFYLRKNNDASSFRWGSAPEIFTRGSTPSI-----AN 215

Query: 228 PPASHFTFMSAFISRKISKIGRRMSNLWKVLVCSR 124
           PP      + +FI+RKISKI RR   LW +++CS+
Sbjct: 216 PP----LLIPSFIARKISKIVRRAHRLWNIVLCSQ 246


>ref|XP_002270898.2| PREDICTED: uncharacterized protein At4g22758-like [Vitis vinifera]
          Length = 248

 Score =  159 bits (402), Expect = 3e-37
 Identities = 84/153 (54%), Positives = 107/153 (69%), Gaps = 1/153 (0%)
 Frame = -3

Query: 585 YKKDAKVVVNVTVEGSPGPVKTLVKLGASVEDTIKLVVDKYSEEGRSPHIGRDGVSSFEL 406
           YKKDAKVVVNVTVEGSPGP++T+V+LG+SVEDTI+LV+D+Y +EGRSP + +D  ++FE+
Sbjct: 106 YKKDAKVVVNVTVEGSPGPIRTMVQLGSSVEDTIQLVIDEYRKEGRSPQLHKDAAAAFEM 165

Query: 405 HQSHFSLESLSKKGTIGDVGSRSFYLRK-SCSGRSSNEGGISQLHSFSSTTGMVSVKSST 229
           H SHF L+SL+K   IGDVGSRSFYLRK S SGRSSN              G  + +++ 
Sbjct: 166 HHSHFCLQSLNKSDAIGDVGSRSFYLRKSSSSGRSSN--------------GEQTPEAAP 211

Query: 228 PPASHFTFMSAFISRKISKIGRRMSNLWKVLVC 130
           P      F  A + R+I KI RRM   WK+L C
Sbjct: 212 PVQRPVFFSPASLDRRIKKIVRRMRRFWKLLGC 244


>ref|XP_003516675.1| PREDICTED: uncharacterized protein At4g22758-like [Glycine max]
          Length = 256

 Score =  157 bits (397), Expect = 1e-36
 Identities = 85/155 (54%), Positives = 109/155 (70%)
 Frame = -3

Query: 588 RYKKDAKVVVNVTVEGSPGPVKTLVKLGASVEDTIKLVVDKYSEEGRSPHIGRDGVSSFE 409
           +Y K+AKVVVNVTVEGSPGPV+T+VKLG+SVEDTIK VVDKY+EEGRSP I  +  SSF+
Sbjct: 106 KYDKEAKVVVNVTVEGSPGPVQTMVKLGSSVEDTIKRVVDKYTEEGRSPQIDANMASSFQ 165

Query: 408 LHQSHFSLESLSKKGTIGDVGSRSFYLRKSCSGRSSNEGGISQLHSFSSTTGMVSVKSST 229
           LH S+FSL SL K   I DVGSRSFYLRK+    S+    ++    + S   + +  S+ 
Sbjct: 166 LHHSYFSLHSLDKSEVIADVGSRSFYLRKNNDASST----LTSSFHWGSAPELATHTSTP 221

Query: 228 PPASHFTFMSAFISRKISKIGRRMSNLWKVLVCSR 124
             A+    + +FI+R+I KI RR   LWK+LVCS+
Sbjct: 222 SIANPPLLIPSFIARRICKIVRRAHRLWKILVCSQ 256


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