BLASTX nr result

ID: Coptis21_contig00021939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021939
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318560.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_002511993.1| peptidyl-prolyl cis-trans isomerase B, ppib,...   184   5e-45
ref|XP_003609079.1| Peptidyl-prolyl cis-trans isomerase [Medicag...   184   8e-45
ref|XP_002273001.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   179   2e-43
emb|CBI15402.3| unnamed protein product [Vitis vinifera]              179   2e-43

>ref|XP_002318560.1| predicted protein [Populus trichocarpa] gi|222859233|gb|EEE96780.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score =  186 bits (472), Expect = 2e-45
 Identities = 93/125 (74%), Positives = 105/125 (84%)
 Frame = +3

Query: 3   GTKNKAASVSIVVRDPNKAPPKLKLVARKGKLEIDEEEVGTSPNGTEFVISTRDSPQLDA 182
           G KN A +VSI+VRDP+K PPKLKLVARKGKLEID+EEVGT PNGTEFVI+T+DSP+LDA
Sbjct: 203 GIKNLAGTVSIIVRDPSKPPPKLKLVARKGKLEIDQEEVGTDPNGTEFVIATKDSPELDA 262

Query: 183 SSXXXXXXXXXXXXXEKIAQVKTVQENSSAGYFRVAKLIGDKRAVVAERGFNRPYSKVLI 362
           SS             EKI QVKTVQEN+++ YFRVAKLIGDKRAVVAERGFNRPYSKV++
Sbjct: 263 SSLVVGRVLEGMEVVEKIGQVKTVQENTTSPYFRVAKLIGDKRAVVAERGFNRPYSKVVV 322

Query: 363 TNCGL 377
           TNCGL
Sbjct: 323 TNCGL 327


>ref|XP_002511993.1| peptidyl-prolyl cis-trans isomerase B, ppib, putative [Ricinus
           communis] gi|223549173|gb|EEF50662.1| peptidyl-prolyl
           cis-trans isomerase B, ppib, putative [Ricinus communis]
          Length = 329

 Score =  184 bits (468), Expect = 5e-45
 Identities = 92/126 (73%), Positives = 105/126 (83%)
 Frame = +3

Query: 3   GTKNKAASVSIVVRDPNKAPPKLKLVARKGKLEIDEEEVGTSPNGTEFVISTRDSPQLDA 182
           G KN A +VSI+VRDP K PPKLKL+ARKGKLEID+EEVGT PNGTEFVI+T+DSP+LDA
Sbjct: 203 GIKNLAGTVSIIVRDPLKPPPKLKLIARKGKLEIDQEEVGTDPNGTEFVIATKDSPELDA 262

Query: 183 SSXXXXXXXXXXXXXEKIAQVKTVQENSSAGYFRVAKLIGDKRAVVAERGFNRPYSKVLI 362
           S+             EKI QVKTVQEN+S+ YFRVAKLIGDKRAVVAERGFNRPYSKV++
Sbjct: 263 SNLVIGRVLEGMEVVEKIGQVKTVQENTSSPYFRVAKLIGDKRAVVAERGFNRPYSKVVV 322

Query: 363 TNCGLI 380
           TNCGL+
Sbjct: 323 TNCGLM 328


>ref|XP_003609079.1| Peptidyl-prolyl cis-trans isomerase [Medicago truncatula]
           gi|357477653|ref|XP_003609112.1| Peptidyl-prolyl
           cis-trans isomerase [Medicago truncatula]
           gi|355510134|gb|AES91276.1| Peptidyl-prolyl cis-trans
           isomerase [Medicago truncatula]
           gi|355510167|gb|AES91309.1| Peptidyl-prolyl cis-trans
           isomerase [Medicago truncatula]
          Length = 322

 Score =  184 bits (466), Expect = 8e-45
 Identities = 92/126 (73%), Positives = 105/126 (83%)
 Frame = +3

Query: 3   GTKNKAASVSIVVRDPNKAPPKLKLVARKGKLEIDEEEVGTSPNGTEFVISTRDSPQLDA 182
           GTKN A SV I+VRDP+K PPK KLVAR GKLEID+EEVGT PNGTEFVI+T+DSP+LDA
Sbjct: 196 GTKNVAGSVGIIVRDPSKPPPKFKLVARLGKLEIDQEEVGTDPNGTEFVIATKDSPELDA 255

Query: 183 SSXXXXXXXXXXXXXEKIAQVKTVQENSSAGYFRVAKLIGDKRAVVAERGFNRPYSKVLI 362
           S+             +KI+QVKTVQEN+S+ YFRVAKLIGDKRAVVAERGFNRPYSKV+I
Sbjct: 256 STLVIGRVVGGMEFVQKISQVKTVQENTSSPYFRVAKLIGDKRAVVAERGFNRPYSKVVI 315

Query: 363 TNCGLI 380
           TNCG+I
Sbjct: 316 TNCGVI 321


>ref|XP_002273001.1| PREDICTED: peptidyl-prolyl cis-trans isomerase B-like [Vitis
           vinifera]
          Length = 323

 Score =  179 bits (455), Expect = 2e-43
 Identities = 91/126 (72%), Positives = 100/126 (79%)
 Frame = +3

Query: 3   GTKNKAASVSIVVRDPNKAPPKLKLVARKGKLEIDEEEVGTSPNGTEFVISTRDSPQLDA 182
           GTKN A SV IVVRDP K PPK+KLVAR GKLEIDEE+VG  PNGTEFVI+++DSP+LD 
Sbjct: 197 GTKNLAGSVGIVVRDPTKPPPKIKLVARGGKLEIDEEDVGADPNGTEFVITSKDSPELDT 256

Query: 183 SSXXXXXXXXXXXXXEKIAQVKTVQENSSAGYFRVAKLIGDKRAVVAERGFNRPYSKVLI 362
           S+             EKI QVKTVQEN+ + YFRVAKLIGDKRA VAERGFNRPYSKVLI
Sbjct: 257 STLVIGRVLEGMEVVEKIGQVKTVQENTGSPYFRVAKLIGDKRATVAERGFNRPYSKVLI 316

Query: 363 TNCGLI 380
           TNCGLI
Sbjct: 317 TNCGLI 322


>emb|CBI15402.3| unnamed protein product [Vitis vinifera]
          Length = 366

 Score =  179 bits (455), Expect = 2e-43
 Identities = 91/126 (72%), Positives = 100/126 (79%)
 Frame = +3

Query: 3   GTKNKAASVSIVVRDPNKAPPKLKLVARKGKLEIDEEEVGTSPNGTEFVISTRDSPQLDA 182
           GTKN A SV IVVRDP K PPK+KLVAR GKLEIDEE+VG  PNGTEFVI+++DSP+LD 
Sbjct: 240 GTKNLAGSVGIVVRDPTKPPPKIKLVARGGKLEIDEEDVGADPNGTEFVITSKDSPELDT 299

Query: 183 SSXXXXXXXXXXXXXEKIAQVKTVQENSSAGYFRVAKLIGDKRAVVAERGFNRPYSKVLI 362
           S+             EKI QVKTVQEN+ + YFRVAKLIGDKRA VAERGFNRPYSKVLI
Sbjct: 300 STLVIGRVLEGMEVVEKIGQVKTVQENTGSPYFRVAKLIGDKRATVAERGFNRPYSKVLI 359

Query: 363 TNCGLI 380
           TNCGLI
Sbjct: 360 TNCGLI 365


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