BLASTX nr result

ID: Coptis21_contig00021930 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021930
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160832.1| PREDICTED: uncharacterized LOC101204847 [Cuc...   141   1e-31
ref|XP_004140887.1| PREDICTED: uncharacterized protein LOC101204...   141   1e-31
gb|ACN35808.1| unknown [Zea mays] gi|413953514|gb|AFW86163.1| me...   138   1e-30
gb|ACG35142.1| membrane protein [Zea mays]                            138   1e-30
ref|XP_002436357.1| hypothetical protein SORBIDRAFT_10g000990 [S...   136   3e-30

>ref|XP_004160832.1| PREDICTED: uncharacterized LOC101204847 [Cucumis sativus]
          Length = 469

 Score =  141 bits (356), Expect = 1e-31
 Identities = 76/126 (60%), Positives = 87/126 (69%)
 Frame = -1

Query: 670 VRAMGAVGYVLISSFLIRENILALITINIHASLTYLLTAIGVNTVPSMNTIYTIFGTLVF 491
           VRA GAVGYVL+SSFLIRENILALITINIHASLT + TA GVN +PSMN IY IFGTLV 
Sbjct: 373 VRAFGAVGYVLVSSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLV- 431

Query: 490 F*LFDCSNFTSAALCLAETKMCPSLKQLFLNCGFFVFLLHILYAVILSRLGMKDSLTLPR 311
                                       FLNCG F+FLLH+LY++ L+RLG+K SLTLPR
Sbjct: 432 ----------------------------FLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPR 463

Query: 310 WLKKAI 293
           WL+KA+
Sbjct: 464 WLEKAM 469


>ref|XP_004140887.1| PREDICTED: uncharacterized protein LOC101204847 [Cucumis sativus]
          Length = 301

 Score =  141 bits (356), Expect = 1e-31
 Identities = 76/126 (60%), Positives = 87/126 (69%)
 Frame = -1

Query: 670 VRAMGAVGYVLISSFLIRENILALITINIHASLTYLLTAIGVNTVPSMNTIYTIFGTLVF 491
           VRA GAVGYVL+SSFLIRENILALITINIHASLT + TA GVN +PSMN IY IFGTLV 
Sbjct: 205 VRAFGAVGYVLVSSFLIRENILALITINIHASLTLIFTAWGVNLIPSMNAIYAIFGTLV- 263

Query: 490 F*LFDCSNFTSAALCLAETKMCPSLKQLFLNCGFFVFLLHILYAVILSRLGMKDSLTLPR 311
                                       FLNCG F+FLLH+LY++ L+RLG+K SLTLPR
Sbjct: 264 ----------------------------FLNCGCFMFLLHLLYSIFLTRLGLKTSLTLPR 295

Query: 310 WLKKAI 293
           WL+KA+
Sbjct: 296 WLEKAM 301


>gb|ACN35808.1| unknown [Zea mays] gi|413953514|gb|AFW86163.1| membrane protein
           [Zea mays]
          Length = 278

 Score =  138 bits (347), Expect = 1e-30
 Identities = 72/126 (57%), Positives = 85/126 (67%)
 Frame = -1

Query: 670 VRAMGAVGYVLISSFLIRENILALITINIHASLTYLLTAIGVNTVPSMNTIYTIFGTLVF 491
           VRA+GA GYVL+SSFLIRENILALIT+NIHASLTY+LTA GVNT+PSM TIY +FGTL  
Sbjct: 182 VRALGACGYVLVSSFLIRENILALITVNIHASLTYILTAAGVNTIPSMGTIYLLFGTL-- 239

Query: 490 F*LFDCSNFTSAALCLAETKMCPSLKQLFLNCGFFVFLLHILYAVILSRLGMKDSLTLPR 311
                                      L LNCGFFVFLLH++Y V L++LG+K SL  PR
Sbjct: 240 ---------------------------LLLNCGFFVFLLHVMYTVFLAKLGIKPSLRSPR 272

Query: 310 WLKKAI 293
           WL + +
Sbjct: 273 WLDRVM 278


>gb|ACG35142.1| membrane protein [Zea mays]
          Length = 192

 Score =  138 bits (347), Expect = 1e-30
 Identities = 72/126 (57%), Positives = 85/126 (67%)
 Frame = -1

Query: 670 VRAMGAVGYVLISSFLIRENILALITINIHASLTYLLTAIGVNTVPSMNTIYTIFGTLVF 491
           VRA+GA GYVL+SSFLIRENILALIT+NIHASLTY+LTA GVNT+PSM TIY +FGTL  
Sbjct: 96  VRALGACGYVLVSSFLIRENILALITVNIHASLTYILTAAGVNTIPSMGTIYLLFGTL-- 153

Query: 490 F*LFDCSNFTSAALCLAETKMCPSLKQLFLNCGFFVFLLHILYAVILSRLGMKDSLTLPR 311
                                      L LNCGFFVFLLH++Y V L++LG+K SL  PR
Sbjct: 154 ---------------------------LLLNCGFFVFLLHVMYTVFLAKLGIKPSLRSPR 186

Query: 310 WLKKAI 293
           WL + +
Sbjct: 187 WLDRVM 192


>ref|XP_002436357.1| hypothetical protein SORBIDRAFT_10g000990 [Sorghum bicolor]
           gi|241914580|gb|EER87724.1| hypothetical protein
           SORBIDRAFT_10g000990 [Sorghum bicolor]
          Length = 286

 Score =  136 bits (343), Expect = 3e-30
 Identities = 72/126 (57%), Positives = 84/126 (66%)
 Frame = -1

Query: 670 VRAMGAVGYVLISSFLIRENILALITINIHASLTYLLTAIGVNTVPSMNTIYTIFGTLVF 491
           VRA+GA GYVL+SSFLIRENILALIT+NIHASLTY+LTA GVNT+PSM+ IY +FGTL+ 
Sbjct: 190 VRALGACGYVLVSSFLIRENILALITVNIHASLTYILTAAGVNTIPSMDAIYVLFGTLLL 249

Query: 490 F*LFDCSNFTSAALCLAETKMCPSLKQLFLNCGFFVFLLHILYAVILSRLGMKDSLTLPR 311
           F                             NC FFVFLLHI+Y V L++LG+K SL  PR
Sbjct: 250 F-----------------------------NCAFFVFLLHIMYTVFLTKLGIKPSLRPPR 280

Query: 310 WLKKAI 293
           WL K I
Sbjct: 281 WLDKVI 286


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