BLASTX nr result
ID: Coptis21_contig00021917
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00021917 (529 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004138489.1| PREDICTED: actin-related protein 2/3 complex... 236 2e-60 ref|XP_002275089.1| PREDICTED: actin-related protein 2/3 complex... 234 8e-60 ref|XP_002326873.1| predicted protein [Populus trichocarpa] gi|2... 226 1e-57 ref|XP_002449701.1| hypothetical protein SORBIDRAFT_05g021810 [S... 225 3e-57 ref|XP_002302488.1| predicted protein [Populus trichocarpa] gi|2... 225 3e-57 >ref|XP_004138489.1| PREDICTED: actin-related protein 2/3 complex subunit 5-like [Cucumis sativus] gi|449495272|ref|XP_004159784.1| PREDICTED: actin-related protein 2/3 complex subunit 5-like [Cucumis sativus] Length = 135 Score = 236 bits (601), Expect = 2e-60 Identities = 113/125 (90%), Positives = 120/125 (96%) Frame = -2 Query: 486 DNIEAIIIRIEHKSRKIESLLKQLKPVEALKTALEGSPPKTTDERCKSANWIAVHRAMMA 307 DN EAII RIEHKSRKIESLLKQLKPVEALKTALEGSPP T DERCKSANWI VHRA+MA Sbjct: 11 DNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMA 70 Query: 306 IKDVDGLFSSLDPEYYDILMKYLYRGLATGDRPTCEQCLRIHEKLTEKAGLGCILRSLSD 127 IKDVDG+FSSLDPEYYDILMKYLYRGL+TGDRPTC+QCLRIHEKLTE+AGLGCILRSL+D Sbjct: 71 IKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLAD 130 Query: 126 TINTV 112 T+NTV Sbjct: 131 TVNTV 135 >ref|XP_002275089.1| PREDICTED: actin-related protein 2/3 complex subunit 5 isoform 1 [Vitis vinifera] gi|359489190|ref|XP_003633894.1| PREDICTED: actin-related protein 2/3 complex subunit 5 isoform 2 [Vitis vinifera] gi|147771541|emb|CAN73657.1| hypothetical protein VITISV_036091 [Vitis vinifera] gi|297734591|emb|CBI16642.3| unnamed protein product [Vitis vinifera] Length = 135 Score = 234 bits (596), Expect = 8e-60 Identities = 116/135 (85%), Positives = 124/135 (91%), Gaps = 2/135 (1%) Frame = -2 Query: 510 MAGGQEGL--DNIEAIIIRIEHKSRKIESLLKQLKPVEALKTALEGSPPKTTDERCKSAN 337 MAG +E + DN EAII RIEHKSRKIESLLKQ KP+EALKTALEGSPP T DERCKSAN Sbjct: 1 MAGTKEFVEADNAEAIITRIEHKSRKIESLLKQHKPIEALKTALEGSPPNTRDERCKSAN 60 Query: 336 WIAVHRAMMAIKDVDGLFSSLDPEYYDILMKYLYRGLATGDRPTCEQCLRIHEKLTEKAG 157 WI VHRAMMAIKDVD LFSSLDPEYYDILMKYLYRGL+TGDRPTC+QCLRIHEKLTE+AG Sbjct: 61 WIVVHRAMMAIKDVDSLFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG 120 Query: 156 LGCILRSLSDTINTV 112 LGCILRSL+DT+NTV Sbjct: 121 LGCILRSLADTVNTV 135 >ref|XP_002326873.1| predicted protein [Populus trichocarpa] gi|222835188|gb|EEE73623.1| predicted protein [Populus trichocarpa] Length = 137 Score = 226 bits (577), Expect = 1e-57 Identities = 109/122 (89%), Positives = 117/122 (95%) Frame = -2 Query: 477 EAIIIRIEHKSRKIESLLKQLKPVEALKTALEGSPPKTTDERCKSANWIAVHRAMMAIKD 298 EAII RIEHK+RKIESLLKQ +PVEALKTALEGSPPKT DERCKSANWI VHRA+MAIKD Sbjct: 16 EAIITRIEHKTRKIESLLKQGRPVEALKTALEGSPPKTRDERCKSANWIVVHRALMAIKD 75 Query: 297 VDGLFSSLDPEYYDILMKYLYRGLATGDRPTCEQCLRIHEKLTEKAGLGCILRSLSDTIN 118 VD LFS+LDPEYYDILMKYLYRGL+TGDRPTC+QCLRIHEKLTEKAGLGCILRSL+DT+N Sbjct: 76 VDSLFSALDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCILRSLADTVN 135 Query: 117 TV 112 TV Sbjct: 136 TV 137 >ref|XP_002449701.1| hypothetical protein SORBIDRAFT_05g021810 [Sorghum bicolor] gi|241935544|gb|EES08689.1| hypothetical protein SORBIDRAFT_05g021810 [Sorghum bicolor] Length = 136 Score = 225 bits (574), Expect = 3e-57 Identities = 107/125 (85%), Positives = 119/125 (95%) Frame = -2 Query: 486 DNIEAIIIRIEHKSRKIESLLKQLKPVEALKTALEGSPPKTTDERCKSANWIAVHRAMMA 307 +N+EAII R+E KSRKIE+LLKQ KPVEALKTALEGSP KT DERCKSANWI VHRAMMA Sbjct: 12 ENLEAIITRVEQKSRKIETLLKQSKPVEALKTALEGSPLKTRDERCKSANWIVVHRAMMA 71 Query: 306 IKDVDGLFSSLDPEYYDILMKYLYRGLATGDRPTCEQCLRIHEKLTEKAGLGCILRSLSD 127 I+DVDG+F+SLDPEYYDILMKYLYRGL+TGDRPTC+QCL+IHEKLTEKAGLGCILRSL+D Sbjct: 72 IRDVDGMFNSLDPEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTEKAGLGCILRSLAD 131 Query: 126 TINTV 112 T+NTV Sbjct: 132 TVNTV 136 >ref|XP_002302488.1| predicted protein [Populus trichocarpa] gi|222844214|gb|EEE81761.1| predicted protein [Populus trichocarpa] Length = 137 Score = 225 bits (574), Expect = 3e-57 Identities = 108/122 (88%), Positives = 116/122 (95%) Frame = -2 Query: 477 EAIIIRIEHKSRKIESLLKQLKPVEALKTALEGSPPKTTDERCKSANWIAVHRAMMAIKD 298 EAII RIEHKSRKIESLLKQ +PVEALKT LEGSPPKT DERCKSANWI VHRA+MAIKD Sbjct: 16 EAIITRIEHKSRKIESLLKQGRPVEALKTVLEGSPPKTRDERCKSANWIVVHRALMAIKD 75 Query: 297 VDGLFSSLDPEYYDILMKYLYRGLATGDRPTCEQCLRIHEKLTEKAGLGCILRSLSDTIN 118 VD LFS+LDPEYYDILMKYLYRGL+TGDRPTC+QCLRIHEKLTEKAG+GCILRSL+DT+N Sbjct: 76 VDALFSALDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGMGCILRSLADTVN 135 Query: 117 TV 112 TV Sbjct: 136 TV 137