BLASTX nr result

ID: Coptis21_contig00021917 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021917
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138489.1| PREDICTED: actin-related protein 2/3 complex...   236   2e-60
ref|XP_002275089.1| PREDICTED: actin-related protein 2/3 complex...   234   8e-60
ref|XP_002326873.1| predicted protein [Populus trichocarpa] gi|2...   226   1e-57
ref|XP_002449701.1| hypothetical protein SORBIDRAFT_05g021810 [S...   225   3e-57
ref|XP_002302488.1| predicted protein [Populus trichocarpa] gi|2...   225   3e-57

>ref|XP_004138489.1| PREDICTED: actin-related protein 2/3 complex subunit 5-like
           [Cucumis sativus] gi|449495272|ref|XP_004159784.1|
           PREDICTED: actin-related protein 2/3 complex subunit
           5-like [Cucumis sativus]
          Length = 135

 Score =  236 bits (601), Expect = 2e-60
 Identities = 113/125 (90%), Positives = 120/125 (96%)
 Frame = -2

Query: 486 DNIEAIIIRIEHKSRKIESLLKQLKPVEALKTALEGSPPKTTDERCKSANWIAVHRAMMA 307
           DN EAII RIEHKSRKIESLLKQLKPVEALKTALEGSPP T DERCKSANWI VHRA+MA
Sbjct: 11  DNAEAIITRIEHKSRKIESLLKQLKPVEALKTALEGSPPNTRDERCKSANWIVVHRALMA 70

Query: 306 IKDVDGLFSSLDPEYYDILMKYLYRGLATGDRPTCEQCLRIHEKLTEKAGLGCILRSLSD 127
           IKDVDG+FSSLDPEYYDILMKYLYRGL+TGDRPTC+QCLRIHEKLTE+AGLGCILRSL+D
Sbjct: 71  IKDVDGMFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAGLGCILRSLAD 130

Query: 126 TINTV 112
           T+NTV
Sbjct: 131 TVNTV 135


>ref|XP_002275089.1| PREDICTED: actin-related protein 2/3 complex subunit 5 isoform 1
           [Vitis vinifera] gi|359489190|ref|XP_003633894.1|
           PREDICTED: actin-related protein 2/3 complex subunit 5
           isoform 2 [Vitis vinifera] gi|147771541|emb|CAN73657.1|
           hypothetical protein VITISV_036091 [Vitis vinifera]
           gi|297734591|emb|CBI16642.3| unnamed protein product
           [Vitis vinifera]
          Length = 135

 Score =  234 bits (596), Expect = 8e-60
 Identities = 116/135 (85%), Positives = 124/135 (91%), Gaps = 2/135 (1%)
 Frame = -2

Query: 510 MAGGQEGL--DNIEAIIIRIEHKSRKIESLLKQLKPVEALKTALEGSPPKTTDERCKSAN 337
           MAG +E +  DN EAII RIEHKSRKIESLLKQ KP+EALKTALEGSPP T DERCKSAN
Sbjct: 1   MAGTKEFVEADNAEAIITRIEHKSRKIESLLKQHKPIEALKTALEGSPPNTRDERCKSAN 60

Query: 336 WIAVHRAMMAIKDVDGLFSSLDPEYYDILMKYLYRGLATGDRPTCEQCLRIHEKLTEKAG 157
           WI VHRAMMAIKDVD LFSSLDPEYYDILMKYLYRGL+TGDRPTC+QCLRIHEKLTE+AG
Sbjct: 61  WIVVHRAMMAIKDVDSLFSSLDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTERAG 120

Query: 156 LGCILRSLSDTINTV 112
           LGCILRSL+DT+NTV
Sbjct: 121 LGCILRSLADTVNTV 135


>ref|XP_002326873.1| predicted protein [Populus trichocarpa] gi|222835188|gb|EEE73623.1|
           predicted protein [Populus trichocarpa]
          Length = 137

 Score =  226 bits (577), Expect = 1e-57
 Identities = 109/122 (89%), Positives = 117/122 (95%)
 Frame = -2

Query: 477 EAIIIRIEHKSRKIESLLKQLKPVEALKTALEGSPPKTTDERCKSANWIAVHRAMMAIKD 298
           EAII RIEHK+RKIESLLKQ +PVEALKTALEGSPPKT DERCKSANWI VHRA+MAIKD
Sbjct: 16  EAIITRIEHKTRKIESLLKQGRPVEALKTALEGSPPKTRDERCKSANWIVVHRALMAIKD 75

Query: 297 VDGLFSSLDPEYYDILMKYLYRGLATGDRPTCEQCLRIHEKLTEKAGLGCILRSLSDTIN 118
           VD LFS+LDPEYYDILMKYLYRGL+TGDRPTC+QCLRIHEKLTEKAGLGCILRSL+DT+N
Sbjct: 76  VDSLFSALDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGLGCILRSLADTVN 135

Query: 117 TV 112
           TV
Sbjct: 136 TV 137


>ref|XP_002449701.1| hypothetical protein SORBIDRAFT_05g021810 [Sorghum bicolor]
           gi|241935544|gb|EES08689.1| hypothetical protein
           SORBIDRAFT_05g021810 [Sorghum bicolor]
          Length = 136

 Score =  225 bits (574), Expect = 3e-57
 Identities = 107/125 (85%), Positives = 119/125 (95%)
 Frame = -2

Query: 486 DNIEAIIIRIEHKSRKIESLLKQLKPVEALKTALEGSPPKTTDERCKSANWIAVHRAMMA 307
           +N+EAII R+E KSRKIE+LLKQ KPVEALKTALEGSP KT DERCKSANWI VHRAMMA
Sbjct: 12  ENLEAIITRVEQKSRKIETLLKQSKPVEALKTALEGSPLKTRDERCKSANWIVVHRAMMA 71

Query: 306 IKDVDGLFSSLDPEYYDILMKYLYRGLATGDRPTCEQCLRIHEKLTEKAGLGCILRSLSD 127
           I+DVDG+F+SLDPEYYDILMKYLYRGL+TGDRPTC+QCL+IHEKLTEKAGLGCILRSL+D
Sbjct: 72  IRDVDGMFNSLDPEYYDILMKYLYRGLSTGDRPTCDQCLKIHEKLTEKAGLGCILRSLAD 131

Query: 126 TINTV 112
           T+NTV
Sbjct: 132 TVNTV 136


>ref|XP_002302488.1| predicted protein [Populus trichocarpa] gi|222844214|gb|EEE81761.1|
           predicted protein [Populus trichocarpa]
          Length = 137

 Score =  225 bits (574), Expect = 3e-57
 Identities = 108/122 (88%), Positives = 116/122 (95%)
 Frame = -2

Query: 477 EAIIIRIEHKSRKIESLLKQLKPVEALKTALEGSPPKTTDERCKSANWIAVHRAMMAIKD 298
           EAII RIEHKSRKIESLLKQ +PVEALKT LEGSPPKT DERCKSANWI VHRA+MAIKD
Sbjct: 16  EAIITRIEHKSRKIESLLKQGRPVEALKTVLEGSPPKTRDERCKSANWIVVHRALMAIKD 75

Query: 297 VDGLFSSLDPEYYDILMKYLYRGLATGDRPTCEQCLRIHEKLTEKAGLGCILRSLSDTIN 118
           VD LFS+LDPEYYDILMKYLYRGL+TGDRPTC+QCLRIHEKLTEKAG+GCILRSL+DT+N
Sbjct: 76  VDALFSALDPEYYDILMKYLYRGLSTGDRPTCDQCLRIHEKLTEKAGMGCILRSLADTVN 135

Query: 117 TV 112
           TV
Sbjct: 136 TV 137


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