BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021908
         (1280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514810.1| ATP binding protein, putative [Ricinus commu...   325   2e-86
ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-...   318   1e-84
gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]             316   9e-84
gb|ACE60552.1| dicer-like protein 2 [Brassica rapa]                   311   2e-82
ref|XP_004157136.1| PREDICTED: endoribonuclease Dicer homolog 2-...   306   6e-81

>ref|XP_002514810.1| ATP binding protein, putative [Ricinus communis]
           gi|223545861|gb|EEF47364.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 1388

 Score =  325 bits (832), Expect = 2e-86
 Identities = 163/240 (67%), Positives = 190/240 (79%)
 Frame = +2

Query: 257 SYQLDALEKAMQQNTIVYLETGSGKTLIAIMLIRAYAYQLRKPSPFIAVFMVPTVHLVKQ 436
           SYQL+ALEKA+QQNTIV+LETGSGKTLIAIML+R+YA+ LRKPSPFIAVF+VP V LVKQ
Sbjct: 11  SYQLEALEKAIQQNTIVFLETGSGKTLIAIMLLRSYAHLLRKPSPFIAVFLVPQVVLVKQ 70

Query: 437 QAGVVSMHTDLKVGKYWGEMGVDFWDANTWKDEIDSHEVLVMTPRILLDALRHGFFKLDI 616
           QA  V  HTDL VGKYWGEMGVDFWDA +WK +I+ +EVLVMTP+ILLD LRH FFKLD 
Sbjct: 71  QAEAVETHTDLTVGKYWGEMGVDFWDAGSWKQQIEQYEVLVMTPQILLDGLRHSFFKLDC 130

Query: 617 INLLIFDECHNAKGNSDYACILKEFYHPQLYSTPTRLPRIFGMTACIIKSKGEKSPEAYA 796
           I +LIFDECH+A+G   YACIL EFYH QL    + LPRIFGMTA  IKSKG KS  AY 
Sbjct: 131 IKVLIFDECHHARGKHPYACILTEFYHRQLTYRDSALPRIFGMTASPIKSKGAKSELAYW 190

Query: 797 KKILEFENLLNSKVFTVVNESVLAEFIPISTPKLKLYKRIDLPNALSLRLENELVKLRTR 976
            +I E EN++ SKV+T  +ESVLAEFIP STPK K YK +D+P A+   L   L  L+++
Sbjct: 191 TEIRELENIMYSKVYTCASESVLAEFIPFSTPKFKFYKPMDIPYAIYASLAENLKILKSK 250


>ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera]
          Length = 1394

 Score =  318 bits (816), Expect = 1e-84
 Identities = 158/242 (65%), Positives = 195/242 (80%)
 Frame = +2

Query: 251 ARSYQLDALEKAMQQNTIVYLETGSGKTLIAIMLIRAYAYQLRKPSPFIAVFMVPTVHLV 430
           ARSYQ++ALEKA++QNTIV+LETGSGKTLIAIML+R YA+ LRKPSPFIAVF+VP V LV
Sbjct: 24  ARSYQIEALEKAIKQNTIVFLETGSGKTLIAIMLLRYYAHLLRKPSPFIAVFLVPKVVLV 83

Query: 431 KQQAGVVSMHTDLKVGKYWGEMGVDFWDANTWKDEIDSHEVLVMTPRILLDALRHGFFKL 610
            QQA  V MHTDLKVG YWG+MGVDFWDA TW+ E D HEVLVMTP ILL+ LRH FFKL
Sbjct: 84  PQQAEAVKMHTDLKVGTYWGDMGVDFWDAATWRKEQDKHEVLVMTPAILLNGLRHSFFKL 143

Query: 611 DIINLLIFDECHNAKGNSDYACILKEFYHPQLYSTPTRLPRIFGMTACIIKSKGEKSPEA 790
           D+I +LIFDECH+A+G   YACI+KEFYH Q+ S  + LPRIFGMTA  IK+KG  +   
Sbjct: 144 DMIKVLIFDECHHARGKDPYACIMKEFYHEQVRSNNSNLPRIFGMTASPIKTKG-VNDLM 202

Query: 791 YAKKILEFENLLNSKVFTVVNESVLAEFIPISTPKLKLYKRIDLPNALSLRLENELVKLR 970
           ++K ++E ENL+NSK++T V+E+VLAEF+P STPKL  YK  D+P+AL   + ++L  L+
Sbjct: 203 HSKNMIELENLMNSKIYTSVSEAVLAEFVPFSTPKLTHYKDKDIPSALFENVAHQLEILK 262

Query: 971 TR 976
            +
Sbjct: 263 NK 264


>gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
          Length = 1403

 Score =  316 bits (809), Expect = 9e-84
 Identities = 156/245 (63%), Positives = 195/245 (79%)
 Frame = +2

Query: 251 ARSYQLDALEKAMQQNTIVYLETGSGKTLIAIMLIRAYAYQLRKPSPFIAVFMVPTVHLV 430
           ARSYQL+ALE A+++NTIVYLETGSGKTLIAIML+R+YAY LRKPSP+IAVF+VPTV LV
Sbjct: 22  ARSYQLEALETALKRNTIVYLETGSGKTLIAIMLLRSYAYLLRKPSPYIAVFLVPTVVLV 81

Query: 431 KQQAGVVSMHTDLKVGKYWGEMGVDFWDANTWKDEIDSHEVLVMTPRILLDALRHGFFKL 610
            QQ   + MHTDLKVGKYWGEMGVD+WDA TW+ ++  HEVLVMTP ILL ALRH F K+
Sbjct: 82  AQQGDALIMHTDLKVGKYWGEMGVDYWDAATWQKQVVDHEVLVMTPAILLAALRHSFLKI 141

Query: 611 DIINLLIFDECHNAKGNSDYACILKEFYHPQLYSTPTRLPRIFGMTACIIKSKGEKSPEA 790
           ++I +LIFDECHNA+G   YACI+KEFYH QL     +LPRIFGMTA  IK+KG  S E 
Sbjct: 142 EMIKVLIFDECHNARGKHPYACIMKEFYHRQLTLESAQLPRIFGMTASPIKTKG-SSVEF 200

Query: 791 YAKKILEFENLLNSKVFTVVNESVLAEFIPISTPKLKLYKRIDLPNALSLRLENELVKLR 970
             K I + ENL++SKV+T V+E  LA++IP STPKLK+Y+ +D+P  L + L ++L++L+
Sbjct: 201 TWKMIRDLENLMHSKVYTCVSEFCLAKYIPFSTPKLKIYRHVDIPCTLFVSLVSDLIRLK 260

Query: 971 TRVLD 985
            +  D
Sbjct: 261 DKYED 265


>gb|ACE60552.1| dicer-like protein 2 [Brassica rapa]
          Length = 1392

 Score =  311 bits (797), Expect = 2e-82
 Identities = 156/249 (62%), Positives = 195/249 (78%), Gaps = 1/249 (0%)
 Frame = +2

Query: 251 ARSYQLDALEKAMQQNTIVYLETGSGKTLIAIMLIRAYAYQLRKPSPFIAVFMVPTVHLV 430
           ARSYQ++ALEKAM++NTIVYLETGSGKTLIAIML+R+YAY  RKPSP  +VF+VP V LV
Sbjct: 23  ARSYQVEALEKAMKRNTIVYLETGSGKTLIAIMLLRSYAYLFRKPSPCFSVFLVPQVVLV 82

Query: 431 KQQAGVVSMHTDLKVGKYWGEMGVDFWDANTWKDEIDSHEVLVMTPRILLDALRHGFFKL 610
            QQA  +  HTDLKVG YWG MGVDFWDA TWK E+D++EVLVMTP ILL ALRH F  L
Sbjct: 83  TQQAEALKRHTDLKVGMYWGSMGVDFWDAPTWKQEVDTYEVLVMTPAILLSALRHSFLSL 142

Query: 611 DIINLLIFDECHNAKGNSDYACILKEFYHPQLYSTPTRLPRIFGMTACIIKSKGEKSPEA 790
           ++I +LIFDECH+A+GN  YACILKEFYH +L S  + +PRIFGMTA  +K+KGE + ++
Sbjct: 143 NMIKVLIFDECHHARGNHAYACILKEFYHKELKSATSLVPRIFGMTASPVKTKGE-NLDS 201

Query: 791 YAKKILEFENLLNSKVFTVVNESVLAEFIPISTPKLKLYKRIDLPNALSLRLENELVKL- 967
           Y KKI E E+L+NSKV+T  NESVLA+F+P STP  K Y  +++P++    +  EL KL 
Sbjct: 202 YWKKIHELESLMNSKVYTCANESVLAQFVPFSTPSFKYYTYVEIPSSARAGIIAELEKLA 261

Query: 968 RTRVLDLST 994
           +  +L L+T
Sbjct: 262 KEHLLALAT 270


>ref|XP_004157136.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
          Length = 276

 Score =  306 bits (785), Expect = 6e-81
 Identities = 154/245 (62%), Positives = 190/245 (77%)
 Frame = +2

Query: 251 ARSYQLDALEKAMQQNTIVYLETGSGKTLIAIMLIRAYAYQLRKPSPFIAVFMVPTVHLV 430
           ARSYQL+ LEKA++QNT+V+LETGSGKTLIAIML+R++A+QLRKPSPF+AVF+VP V LV
Sbjct: 20  ARSYQLEGLEKALKQNTVVFLETGSGKTLIAIMLLRSFAHQLRKPSPFVAVFLVPQVVLV 79

Query: 431 KQQAGVVSMHTDLKVGKYWGEMGVDFWDANTWKDEIDSHEVLVMTPRILLDALRHGFFKL 610
            QQA  + MH+DL VG Y+G+MGVDFWD   WK EI+ HEVLVMTP ILL+ LRH FF+L
Sbjct: 80  TQQAEALKMHSDLSVGLYYGDMGVDFWDGAIWKREIEKHEVLVMTPAILLNGLRHSFFRL 139

Query: 611 DIINLLIFDECHNAKGNSDYACILKEFYHPQLYSTPTRLPRIFGMTACIIKSKGEKSPEA 790
            +I +LI DECH+A+G   YACI+ EFYH QL    + LPRIFGMTA  IKSKG  S   
Sbjct: 140 SMIKVLILDECHHARGKHPYACIMTEFYHQQLSLGKSDLPRIFGMTASPIKSKGGNSELN 199

Query: 791 YAKKILEFENLLNSKVFTVVNESVLAEFIPISTPKLKLYKRIDLPNALSLRLENELVKLR 970
           Y + I E E+LLNSKV+TV +ES LA F+PISTPK K Y R D+P AL  +L N L  L+
Sbjct: 200 YWQYIQELESLLNSKVYTVSSESELANFVPISTPKFKFYIRKDIPYALYEQLANALKVLK 259

Query: 971 TRVLD 985
           ++V++
Sbjct: 260 SKVMN 264