BLASTX nr result

ID: Coptis21_contig00021906 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021906
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004160676.1| PREDICTED: ycf20-like protein-like [Cucumis ...   211   2e-52
ref|XP_004145006.1| PREDICTED: ycf20-like protein-like [Cucumis ...   211   2e-52
ref|XP_002274644.1| PREDICTED: ycf20-like protein-like [Vitis vi...   209   6e-52
ref|XP_002518013.1| conserved hypothetical protein [Ricinus comm...   209   8e-52
ref|XP_003517036.1| PREDICTED: uncharacterized protein LOC100306...   189   7e-46

>ref|XP_004160676.1| PREDICTED: ycf20-like protein-like [Cucumis sativus]
          Length = 221

 Score =  211 bits (537), Expect = 2e-52
 Identities = 118/221 (53%), Positives = 152/221 (68%), Gaps = 6/221 (2%)
 Frame = +2

Query: 74  MEIKMLVIPNYPRNAVLRIPKFFRSRFLD---VACLRSHSILR--LYPRLGFFHXXXXXX 238
           M   M ++  YPR + L+ P + R+R      VAC     +L   L+ +   F+      
Sbjct: 1   MATSMRLLSTYPRTSKLQSPNYPRTRVSVPGLVACFYDTYVLHGHLHHQCCSFYVTKPSV 60

Query: 239 XXXXKRMSIAWPARSSVDGEGSGSTGNSPNGRTRLIKAIQDFQDKLNARIAEMKKGFPMK 418
               K+M+++   R SV+G       ++ NGRTRLI+ IQ  Q KLNARI E++K  P+K
Sbjct: 61  LKNFKKMALS--IRGSVEGNPLDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPLK 118

Query: 419 VLCFLVGFYCATAFATVIGQTGDWDILSAGLAVVVVEGIGALMYKASFPVLSQIRSLITM 598
           +L FLVGFY ATAFATVIGQTGDWDILSA LAVVVVEGIGALMY+AS P+L++I+ LITM
Sbjct: 119 ILFFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKDLITM 178

Query: 599 FNYWKAGLSLGLFLDAFKYEMDDIFGLCNPVNFEI-DVLPI 718
           FNYWKAGLS+GLFLD+FK+EMDDIFGL N  +  + +V+PI
Sbjct: 179 FNYWKAGLSMGLFLDSFKFEMDDIFGLHNLFHLYLHNVIPI 219


>ref|XP_004145006.1| PREDICTED: ycf20-like protein-like [Cucumis sativus]
           gi|449474824|ref|XP_004154295.1| PREDICTED: ycf20-like
           protein-like [Cucumis sativus]
          Length = 221

 Score =  211 bits (537), Expect = 2e-52
 Identities = 118/221 (53%), Positives = 152/221 (68%), Gaps = 6/221 (2%)
 Frame = +2

Query: 74  MEIKMLVIPNYPRNAVLRIPKFFRSRFLD---VACLRSHSILR--LYPRLGFFHXXXXXX 238
           M   M ++  YPR + L+ P + R+R      VAC     +L   L+ +   F+      
Sbjct: 1   MATSMRLLSTYPRTSKLQSPNYPRTRVSVPGLVACFYDTYVLHGHLHHQCCSFYVTKPSV 60

Query: 239 XXXXKRMSIAWPARSSVDGEGSGSTGNSPNGRTRLIKAIQDFQDKLNARIAEMKKGFPMK 418
               K+M+++   R SV+G       ++ NGRTRLI+ IQ  Q KLNARI E++K  P+K
Sbjct: 61  LKNFKKMALS--IRGSVEGNPFDPPSSNSNGRTRLIRIIQAIQTKLNARINELRKNLPLK 118

Query: 419 VLCFLVGFYCATAFATVIGQTGDWDILSAGLAVVVVEGIGALMYKASFPVLSQIRSLITM 598
           +L FLVGFY ATAFATVIGQTGDWDILSA LAVVVVEGIGALMY+AS P+L++I+ LITM
Sbjct: 119 ILFFLVGFYSATAFATVIGQTGDWDILSAALAVVVVEGIGALMYRASLPLLNKIKDLITM 178

Query: 599 FNYWKAGLSLGLFLDAFKYEMDDIFGLCNPVNFEI-DVLPI 718
           FNYWKAGLS+GLFLD+FK+EMDDIFGL N  +  + +V+PI
Sbjct: 179 FNYWKAGLSMGLFLDSFKFEMDDIFGLHNLFHLYLHNVIPI 219


>ref|XP_002274644.1| PREDICTED: ycf20-like protein-like [Vitis vinifera]
          Length = 217

 Score =  209 bits (532), Expect = 6e-52
 Identities = 118/202 (58%), Positives = 134/202 (66%), Gaps = 4/202 (1%)
 Frame = +2

Query: 131 PKFFRSRFLDVA---CLRSHSILRLYPRLGFFHXXXXXXXXXXKRMSIAWPARSSVDGEG 301
           PK+  SR+  V    CL   S       L FF           KRM   W  RSSVDG  
Sbjct: 23  PKWVSSRYPVVGIVTCLHKTSF-----GLCFFRVAQLSLVNTSKRM--VWSVRSSVDGNS 75

Query: 302 SGSTG-NSPNGRTRLIKAIQDFQDKLNARIAEMKKGFPMKVLCFLVGFYCATAFATVIGQ 478
              T  N  +GRTRL++ IQ  Q KL+ RI E++K  PMK+L FLVGFYCATAFATVIGQ
Sbjct: 76  LDPTPTNGTDGRTRLVRVIQGIQIKLSTRILELRKDLPMKILFFLVGFYCATAFATVIGQ 135

Query: 479 TGDWDILSAGLAVVVVEGIGALMYKASFPVLSQIRSLITMFNYWKAGLSLGLFLDAFKYE 658
           TGDWDILSA LAV VVE IGALMY+AS  +  ++R LITMFNYWKAGL LGLFLD+FKYE
Sbjct: 136 TGDWDILSAALAVFVVELIGALMYRASIHLFDKVRRLITMFNYWKAGLCLGLFLDSFKYE 195

Query: 659 MDDIFGLCNPVNFEIDVLPIGL 724
           M++I G CNP NFEID  PI L
Sbjct: 196 MNNIIGSCNPFNFEIDDFPIFL 217


>ref|XP_002518013.1| conserved hypothetical protein [Ricinus communis]
           gi|223542995|gb|EEF44531.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 238

 Score =  209 bits (531), Expect = 8e-52
 Identities = 114/221 (51%), Positives = 143/221 (64%), Gaps = 10/221 (4%)
 Frame = +2

Query: 86  MLVIPNYPRNAVLRIPKFFRSRFLDVA---------CLRSHSILRLYPRLGFFHXXXXXX 238
           ++   N+P  A L   +  RS  L V+         C  +H   +LY +    +      
Sbjct: 20  VMTYSNHPTTAKLPSRESLRSHTLVVSLTSCSHKPVCAFAH---KLYSQSSHVYVAEPFW 76

Query: 239 XXXXKRMSIAWPARSSVDGEG-SGSTGNSPNGRTRLIKAIQDFQDKLNARIAEMKKGFPM 415
               +R  I W  RSS D  G   S+     G TRL++AIQ  Q K+ ARI E++K  P+
Sbjct: 77  DNNFRR--ITWQIRSSADSSGLDPSSSGRTRGGTRLLRAIQALQTKIVARIQEIRKNLPI 134

Query: 416 KVLCFLVGFYCATAFATVIGQTGDWDILSAGLAVVVVEGIGALMYKASFPVLSQIRSLIT 595
           K+L FLVGFYCATAFATVIGQTGDWDILSA LAV VVEGIGALMY+ASFP+ + +RSLIT
Sbjct: 135 KLLFFLVGFYCATAFATVIGQTGDWDILSAALAVAVVEGIGALMYRASFPLFNNMRSLIT 194

Query: 596 MFNYWKAGLSLGLFLDAFKYEMDDIFGLCNPVNFEIDVLPI 718
           MFNYWKAGLSLGLFLD+FKY++DD+   CNP  FE+D+ P+
Sbjct: 195 MFNYWKAGLSLGLFLDSFKYKIDDVLNSCNPFYFEMDIFPV 235


>ref|XP_003517036.1| PREDICTED: uncharacterized protein LOC100306594 [Glycine max]
          Length = 197

 Score =  189 bits (480), Expect = 7e-46
 Identities = 96/136 (70%), Positives = 112/136 (82%), Gaps = 1/136 (0%)
 Frame = +2

Query: 251 KRMSIAWPARSSV-DGEGSGSTGNSPNGRTRLIKAIQDFQDKLNARIAEMKKGFPMKVLC 427
           KRM   W  RSS+ D   S ST N  NGRTR+I+ IQ+FQ KL ++I E+KK  PMK+L 
Sbjct: 64  KRM--IWSVRSSLNDSSFSPSTSNGSNGRTRIIRVIQEFQTKLGSKIQEVKKNLPMKLLF 121

Query: 428 FLVGFYCATAFATVIGQTGDWDILSAGLAVVVVEGIGALMYKASFPVLSQIRSLITMFNY 607
           FLVGFYCATAFATVIGQTGDWDILSA LAV VVEGIGALMY+AS P++S+ RSLI++FNY
Sbjct: 122 FLVGFYCATAFATVIGQTGDWDILSAALAVAVVEGIGALMYRASLPLVSKSRSLISLFNY 181

Query: 608 WKAGLSLGLFLDAFKY 655
           WKAGL+LGLFLD+FKY
Sbjct: 182 WKAGLTLGLFLDSFKY 197


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