BLASTX nr result

ID: Coptis21_contig00021902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021902
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285522.2| PREDICTED: BTB/POZ domain-containing protein...    75   7e-12
ref|XP_002285523.1| PREDICTED: BTB/POZ domain-containing protein...    75   7e-12
emb|CAN82247.1| hypothetical protein VITISV_036489 [Vitis vinifera]    75   7e-12
ref|XP_003550246.1| PREDICTED: BTB/POZ domain-containing protein...    69   5e-10
ref|XP_002515424.1| protein binding protein, putative [Ricinus c...    67   2e-09

>ref|XP_002285522.2| PREDICTED: BTB/POZ domain-containing protein NPY1-like isoform 1
           [Vitis vinifera]
          Length = 620

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 48/115 (41%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
 Frame = -1

Query: 477 GLNPPQNISCHSSRSTTNT-EDWEKTV----PEEYKCLDKQMKSMKISDEDCRKTGKRNX 313
           G   P +I   +S++ TN  E+WEK      PE  K L +QM  MKI DE+ RK GK   
Sbjct: 492 GAQAPNSIPRDTSQAMTNMDEEWEKPAIVRGPESCKSLRRQMNQMKIKDEEFRKNGKLTK 551

Query: 312 XXXXXXXXGILLLPSRSRRIFDKLWVGSKGLGEIKXXXXXXXXXXXXSLNPGETK 148
                   G+ LLPSRSRR+FDKLW   K  GE +            S+ PGETK
Sbjct: 552 KGSKNSRSGVQLLPSRSRRMFDKLWAVGKKHGENRSSETSGSSQSPTSVAPGETK 606


>ref|XP_002285523.1| PREDICTED: BTB/POZ domain-containing protein NPY1-like isoform 2
           [Vitis vinifera]
          Length = 624

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 48/115 (41%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
 Frame = -1

Query: 477 GLNPPQNISCHSSRSTTNT-EDWEKTV----PEEYKCLDKQMKSMKISDEDCRKTGKRNX 313
           G   P +I   +S++ TN  E+WEK      PE  K L +QM  MKI DE+ RK GK   
Sbjct: 496 GAQAPNSIPRDTSQAMTNMDEEWEKPAIVRGPESCKSLRRQMNQMKIKDEEFRKNGKLTK 555

Query: 312 XXXXXXXXGILLLPSRSRRIFDKLWVGSKGLGEIKXXXXXXXXXXXXSLNPGETK 148
                   G+ LLPSRSRR+FDKLW   K  GE +            S+ PGETK
Sbjct: 556 KGSKNSRSGVQLLPSRSRRMFDKLWAVGKKHGENRSSETSGSSQSPTSVAPGETK 610


>emb|CAN82247.1| hypothetical protein VITISV_036489 [Vitis vinifera]
          Length = 734

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 48/115 (41%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
 Frame = -1

Query: 477 GLNPPQNISCHSSRSTTNT-EDWEKTV----PEEYKCLDKQMKSMKISDEDCRKTGKRNX 313
           G   P +I   +S++ TN  E+WEK      PE  K L +QM  MKI DE+ RK GK   
Sbjct: 606 GAQAPNSIPRDNSQAMTNMDEEWEKPAIVRGPESCKSLRRQMNQMKIKDEEFRKNGKLTK 665

Query: 312 XXXXXXXXGILLLPSRSRRIFDKLWVGSKGLGEIKXXXXXXXXXXXXSLNPGETK 148
                   G+ LLPSRSRR+FDKLW   K  GE +            S+ PGETK
Sbjct: 666 KGSKNSRSGVQLLPSRSRRMFDKLWAVGKKHGENRSSETSGSSQSPTSVAPGETK 720


>ref|XP_003550246.1| PREDICTED: BTB/POZ domain-containing protein NPY1-like [Glycine
           max]
          Length = 616

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 44/105 (41%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
 Frame = -1

Query: 447 HSSRSTTNT-----EDWEKTVPEEYKCLDKQMKSMKISDEDCRKTGKRNXXXXXXXXXGI 283
           +S  ++TNT     E+  K+  E  + LD QM  MKI DE  +K GK N         G+
Sbjct: 498 NSPHNSTNTHVNGDEECAKSGGESCQSLDNQMCHMKIRDEQLQKNGKLNKKSSKNSRSGM 557

Query: 282 LLLPSRSRRIFDKLWVGSKGLGEIKXXXXXXXXXXXXSLNPGETK 148
            LLPSRSRRIFDKLW+  KG GE +            S+ PG+TK
Sbjct: 558 QLLPSRSRRIFDKLWIVGKGQGENRSSETSGSSNSPTSVVPGDTK 602


>ref|XP_002515424.1| protein binding protein, putative [Ricinus communis]
           gi|223545368|gb|EEF46873.1| protein binding protein,
           putative [Ricinus communis]
          Length = 617

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 43/102 (42%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
 Frame = -1

Query: 447 HSSRSTTNT-EDWEKTVPEEYKCLDKQMKSMKISDEDCRKTGKRNXXXXXXXXXGILLLP 271
           ++S S TNT E+ EKT  E+ K + KQ+  +K+ DE+  K  +           GI LLP
Sbjct: 502 YASNSMTNTDEECEKTAAEDNKSMKKQVSQLKVKDEELHKNEQLTKKNSKNSKSGIQLLP 561

Query: 270 SRSRRIFDKLW-VGSKGLGEIKXXXXXXXXXXXXSLNPGETK 148
           SRSRRIFDKLW VG KG  E +            S+ PG+TK
Sbjct: 562 SRSRRIFDKLWVVGGKGNVENRSSETSGSSQSPTSIVPGDTK 603


Top