BLASTX nr result
ID: Coptis21_contig00021891
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00021891
(564 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EFN55101.1| hypothetical protein CHLNCDRAFT_135006 [Chlorella... 116 1e-52
gb|EIE27628.1| hypothetical protein COCSUDRAFT_11521 [Coccomyxa ... 119 4e-52
ref|XP_003554884.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 119 5e-52
ref|XP_004159798.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 115 4e-51
ref|XP_004138587.1| PREDICTED: ATP-dependent RNA helicase SUPV3L... 115 4e-51
>gb|EFN55101.1| hypothetical protein CHLNCDRAFT_135006 [Chlorella variabilis]
Length = 548
Score = 116 bits (290), Expect(2) = 1e-52
Identities = 51/96 (53%), Positives = 75/96 (78%)
Frame = +3
Query: 9 ECAVIDEIQMVGCRTRGFSFTRAVLGIPADELHLCGDPAVVPLIQEILGVTDDSIQVQYY 188
E AV+DEIQM+ +RG++FTRA+LG+PA LH+CGDPA +PL+++I+ T D ++V+ Y
Sbjct: 118 EVAVLDEIQMIADESRGWAFTRALLGVPARTLHVCGDPAALPLLEQIVAETGDRLEVRRY 177
Query: 189 ERLLPLVPSKVPLGSFSNIKTGDCIVTFSRREIYRL 296
ERL PLV ++ PL S S ++ GDC+V FSRR+++ L
Sbjct: 178 ERLSPLVAARRPLASLSQVQRGDCVVAFSRRDVHAL 213
Score = 116 bits (290), Expect(2) = 1e-52
Identities = 59/97 (60%), Positives = 73/97 (75%)
Frame = +1
Query: 274 HAVRYTG*REIEERGKHLCSVVYGSLPPETRTRQATMFNDESSEFDVLVASDAIGMGLNL 453
HA+R +EIE G+H C VVYG+LPP+ R QA++FN + F+VL ASDA+GMGLNL
Sbjct: 211 HALR----QEIEGYGQHRCCVVYGALPPDARQLQASLFNTPRTGFNVLAASDAVGMGLNL 266
Query: 454 NIARIIFSTLKKFDGTEMRDLTVPEIKQIAGRAGRYG 564
I RIIF++L K+DGT R LT EIKQ+AGRAGRYG
Sbjct: 267 AIRRIIFTSLSKYDGTAERALTTAEIKQVAGRAGRYG 303
>gb|EIE27628.1| hypothetical protein COCSUDRAFT_11521 [Coccomyxa subellipsoidea
C-169]
Length = 574
Score = 119 bits (297), Expect(2) = 4e-52
Identities = 57/97 (58%), Positives = 74/97 (76%)
Frame = +1
Query: 274 HAVRYTG*REIEERGKHLCSVVYGSLPPETRTRQATMFNDESSEFDVLVASDAIGMGLNL 453
HA++ R I+ G H +VYG+LP E RT+QAT+FN + F+V+ ASDA+GMGLNL
Sbjct: 245 HAIK----RVIDTHGAHQACIVYGALPAEARTQQATLFNAPRTGFNVMAASDAVGMGLNL 300
Query: 454 NIARIIFSTLKKFDGTEMRDLTVPEIKQIAGRAGRYG 564
NI R+IFS+++KFDGT R LT PE+KQIAGRAGR+G
Sbjct: 301 NIRRVIFSSMEKFDGTSFRPLTPPEVKQIAGRAGRFG 337
Score = 111 bits (278), Expect(2) = 4e-52
Identities = 48/97 (49%), Positives = 74/97 (76%)
Frame = +3
Query: 9 ECAVIDEIQMVGCRTRGFSFTRAVLGIPADELHLCGDPAVVPLIQEILGVTDDSIQVQYY 188
E AV+DE+QM+G +RG +FTRA+LG+PA LHLCGD A +PL+++++ D+++V+ Y
Sbjct: 152 EVAVVDEVQMLGDGSRGHAFTRALLGLPAATLHLCGDAAALPLLRQLVADAGDTLEVRTY 211
Query: 189 ERLLPLVPSKVPLGSFSNIKTGDCIVTFSRREIYRLE 299
ERLLPLVP L S +++ GDC+V FSRR+++ ++
Sbjct: 212 ERLLPLVPQSAALTSLKSVRRGDCVVAFSRRDVHAIK 248
>ref|XP_003554884.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
[Glycine max]
Length = 829
Score = 119 bits (298), Expect(2) = 5e-52
Identities = 54/87 (62%), Positives = 74/87 (85%)
Frame = +1
Query: 304 IEERGKHLCSVVYGSLPPETRTRQATMFNDESSEFDVLVASDAIGMGLNLNIARIIFSTL 483
IE++ KH C V+YG+LPPETR +QA++FND+S+E+DVLVASDA+GMGLNLNI R+IF++L
Sbjct: 480 IEKQTKHRCCVIYGALPPETRRQQASLFNDQSNEYDVLVASDAVGMGLNLNIRRVIFNSL 539
Query: 484 KKFDGTEMRDLTVPEIKQIAGRAGRYG 564
K++G +M + ++KQIAGRAGR G
Sbjct: 540 AKYNGDKMVPIPASQVKQIAGRAGRRG 566
Score = 110 bits (276), Expect(2) = 5e-52
Identities = 52/99 (52%), Positives = 76/99 (76%), Gaps = 1/99 (1%)
Frame = +3
Query: 6 FECAVIDEIQMVGCRTRGFSFTRAVLGIPADELHLCGDPAVVPLIQEILGVTDDSIQVQY 185
+E AVIDEIQM+ RG+++TRA+LG+ ADE+HLCGDP+V+ ++++I T D + Q+
Sbjct: 379 YEVAVIDEIQMMADSNRGYAWTRALLGLKADEIHLCGDPSVLDIVRKICQDTGDELCEQH 438
Query: 186 YERLLPL-VPSKVPLGSFSNIKTGDCIVTFSRREIYRLE 299
YER PL V +K LG+F NI++GDC+V FSRREI+ ++
Sbjct: 439 YERFKPLVVEAKTLLGNFENIRSGDCVVAFSRREIFEVK 477
>ref|XP_004159798.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
[Cucumis sativus]
Length = 795
Score = 115 bits (289), Expect(2) = 4e-51
Identities = 54/87 (62%), Positives = 69/87 (79%)
Frame = +1
Query: 304 IEERGKHLCSVVYGSLPPETRTRQATMFNDESSEFDVLVASDAIGMGLNLNIARIIFSTL 483
IE+ KH C V+YGSLPPETR QA++FND+ +EFDVLVASDA+GMGLNLNI R++F L
Sbjct: 479 IEKFTKHRCCVIYGSLPPETRRHQASLFNDQDNEFDVLVASDAVGMGLNLNIGRVVFYNL 538
Query: 484 KKFDGTEMRDLTVPEIKQIAGRAGRYG 564
KF+G ++ + ++KQIAGRAGR G
Sbjct: 539 AKFNGDKIVPVPASQVKQIAGRAGRRG 565
Score = 111 bits (277), Expect(2) = 4e-51
Identities = 52/99 (52%), Positives = 75/99 (75%), Gaps = 1/99 (1%)
Frame = +3
Query: 6 FECAVIDEIQMVGCRTRGFSFTRAVLGIPADELHLCGDPAVVPLIQEILGVTDDSIQVQY 185
+E AVIDEIQM+ RG+++TRA+LG+ ADE+HLCGDP+V+ ++++I T D + Q+
Sbjct: 378 YEIAVIDEIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVVRKICSETGDELHEQH 437
Query: 186 YERLLPL-VPSKVPLGSFSNIKTGDCIVTFSRREIYRLE 299
YER PL V +K LG F N+++GDCIV FSRREI+ ++
Sbjct: 438 YERFKPLVVEAKTLLGDFKNVRSGDCIVAFSRREIFEVK 476
>ref|XP_004138587.1| PREDICTED: ATP-dependent RNA helicase SUPV3L1, mitochondrial-like
[Cucumis sativus]
Length = 777
Score = 115 bits (289), Expect(2) = 4e-51
Identities = 54/87 (62%), Positives = 69/87 (79%)
Frame = +1
Query: 304 IEERGKHLCSVVYGSLPPETRTRQATMFNDESSEFDVLVASDAIGMGLNLNIARIIFSTL 483
IE+ KH C V+YGSLPPETR QA++FND+ +EFDVLVASDA+GMGLNLNI R++F L
Sbjct: 461 IEKFTKHRCCVIYGSLPPETRRHQASLFNDQDNEFDVLVASDAVGMGLNLNIGRVVFYNL 520
Query: 484 KKFDGTEMRDLTVPEIKQIAGRAGRYG 564
KF+G ++ + ++KQIAGRAGR G
Sbjct: 521 AKFNGDKIVPVPASQVKQIAGRAGRRG 547
Score = 111 bits (277), Expect(2) = 4e-51
Identities = 52/99 (52%), Positives = 75/99 (75%), Gaps = 1/99 (1%)
Frame = +3
Query: 6 FECAVIDEIQMVGCRTRGFSFTRAVLGIPADELHLCGDPAVVPLIQEILGVTDDSIQVQY 185
+E AVIDEIQM+ RG+++TRA+LG+ ADE+HLCGDP+V+ ++++I T D + Q+
Sbjct: 360 YEIAVIDEIQMMSDPCRGYAWTRALLGLKADEIHLCGDPSVLNVVRKICSETGDELHEQH 419
Query: 186 YERLLPL-VPSKVPLGSFSNIKTGDCIVTFSRREIYRLE 299
YER PL V +K LG F N+++GDCIV FSRREI+ ++
Sbjct: 420 YERFKPLVVEAKTLLGDFKNVRSGDCIVAFSRREIFEVK 458