BLASTX nr result

ID: Coptis21_contig00021890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021890
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331867.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-22
ref|XP_002271969.2| PREDICTED: uncharacterized protein LOC100245...   108   4e-22
emb|CBI30819.3| unnamed protein product [Vitis vinifera]              108   4e-22
ref|XP_002317304.1| predicted protein [Populus trichocarpa] gi|2...   105   5e-21
ref|XP_003532782.1| PREDICTED: uncharacterized protein LOC100803...   100   2e-19

>ref|XP_002331867.1| predicted protein [Populus trichocarpa] gi|222875385|gb|EEF12516.1|
           predicted protein [Populus trichocarpa]
          Length = 314

 Score =  110 bits (275), Expect = 1e-22
 Identities = 61/130 (46%), Positives = 83/130 (63%), Gaps = 1/130 (0%)
 Frame = -1

Query: 387 LSQLRNSGSASSLPYSPXXXXXXXXXGSSADVPGSFRQYLPSSPASSTIDHYDLIS-QYR 211
           L Q +NS S SSLP S           S++   G+F    P++PA +TI + D++S QY+
Sbjct: 150 LPQYKNSVSVSSLPQSAAVPSGYGYGSSTSIPTGNFPLNAPAAPAGTTIGYDDVLSSQYK 209

Query: 210 DNNNFVSPSQNEQSARWAGGPGSRTMPSLSAGQYYNFQGQNLQFGWDVQQGRKHSQAYGA 31
           D ++ +S  QNE SA W  GPGSRTM ++ A  YYNFQGQN Q G   +QG++ SQ +GA
Sbjct: 210 DASHLISLQQNENSAMWMHGPGSRTMSAVPASTYYNFQGQNQQPG-VFRQGQQPSQHFGA 268

Query: 30  PGYPSPHHSQ 1
           PGYP+ +HSQ
Sbjct: 269 PGYPNYYHSQ 278


>ref|XP_002271969.2| PREDICTED: uncharacterized protein LOC100245196 [Vitis vinifera]
          Length = 866

 Score =  108 bits (270), Expect = 4e-22
 Identities = 63/131 (48%), Positives = 83/131 (63%), Gaps = 2/131 (1%)
 Frame = -1

Query: 387  LSQLRNSGSASSLPYSPXXXXXXXXXGSSADVPGSFRQYLPSSPASSTIDHYDLI-SQYR 211
            L Q +NS S SSLP S          GSS  +PG+F    P++ A +TI + D+I SQY+
Sbjct: 701  LPQYKNSVSVSSLPQSAAIASGYGAFGSSTSIPGNFSLNPPTAAAGTTIGYDDVINSQYK 760

Query: 210  DNNNFVS-PSQNEQSARWAGGPGSRTMPSLSAGQYYNFQGQNLQFGWDVQQGRKHSQAYG 34
            D N+ +S   QNE SA W  GPGSRTM ++ A  YY+FQGQN Q G   +QG++ SQ +G
Sbjct: 761  DGNHLISLQQQNENSAMWVHGPGSRTMSAVPANTYYSFQGQNQQPG-GFRQGQQPSQHFG 819

Query: 33   APGYPSPHHSQ 1
            A GYP+ +HSQ
Sbjct: 820  ALGYPNFYHSQ 830


>emb|CBI30819.3| unnamed protein product [Vitis vinifera]
          Length = 799

 Score =  108 bits (270), Expect = 4e-22
 Identities = 63/131 (48%), Positives = 83/131 (63%), Gaps = 2/131 (1%)
 Frame = -1

Query: 387  LSQLRNSGSASSLPYSPXXXXXXXXXGSSADVPGSFRQYLPSSPASSTIDHYDLI-SQYR 211
            L Q +NS S SSLP S          GSS  +PG+F    P++ A +TI + D+I SQY+
Sbjct: 634  LPQYKNSVSVSSLPQSAAIASGYGAFGSSTSIPGNFSLNPPTAAAGTTIGYDDVINSQYK 693

Query: 210  DNNNFVS-PSQNEQSARWAGGPGSRTMPSLSAGQYYNFQGQNLQFGWDVQQGRKHSQAYG 34
            D N+ +S   QNE SA W  GPGSRTM ++ A  YY+FQGQN Q G   +QG++ SQ +G
Sbjct: 694  DGNHLISLQQQNENSAMWVHGPGSRTMSAVPANTYYSFQGQNQQPG-GFRQGQQPSQHFG 752

Query: 33   APGYPSPHHSQ 1
            A GYP+ +HSQ
Sbjct: 753  ALGYPNFYHSQ 763


>ref|XP_002317304.1| predicted protein [Populus trichocarpa] gi|222860369|gb|EEE97916.1|
            predicted protein [Populus trichocarpa]
          Length = 911

 Score =  105 bits (261), Expect = 5e-21
 Identities = 59/130 (45%), Positives = 82/130 (63%), Gaps = 1/130 (0%)
 Frame = -1

Query: 387  LSQLRNSGSASSLPYSPXXXXXXXXXGSSADVPGSFRQYLPSSPASSTIDHYDLI-SQYR 211
            L Q +NS S SSLP S           S++   G+F    P++PA +TI + D++ SQY+
Sbjct: 746  LPQYKNSVSVSSLPQSAAVASGYGFGSSTSIPAGNFPLNAPTAPAGTTIGYDDILGSQYK 805

Query: 210  DNNNFVSPSQNEQSARWAGGPGSRTMPSLSAGQYYNFQGQNLQFGWDVQQGRKHSQAYGA 31
            D ++ +S  QNE SA W  GPGSRTM ++ A  YY+FQGQN Q G   +QG++ SQ +GA
Sbjct: 806  DASHLMSLQQNENSAMWLHGPGSRTMSAVPASTYYSFQGQNQQPG-GFRQGQQPSQHFGA 864

Query: 30   PGYPSPHHSQ 1
             GYP+ +HSQ
Sbjct: 865  LGYPNYYHSQ 874


>ref|XP_003532782.1| PREDICTED: uncharacterized protein LOC100803908 [Glycine max]
          Length = 837

 Score =  100 bits (248), Expect = 2e-19
 Identities = 56/130 (43%), Positives = 77/130 (59%), Gaps = 1/130 (0%)
 Frame = -1

Query: 387  LSQLRNSGSASSLPYSPXXXXXXXXXGSSADVPGSFRQYLPSSPASSTIDHYDLI-SQYR 211
            L Q +NS S SSLP S           S++   G++    P++P S+TI + D+I SQY+
Sbjct: 672  LPQYKNSISVSSLPQSAAVASGYGFGSSTSIPGGNYPLNPPAAPTSTTIGYDDVINSQYK 731

Query: 210  DNNNFVSPSQNEQSARWAGGPGSRTMPSLSAGQYYNFQGQNLQFGWDVQQGRKHSQAYGA 31
            DNN+ +S  QNE S  W  GP SRTM ++ A  YY+FQGQN Q G   Q  +   Q +G+
Sbjct: 732  DNNHMISLQQNENSPMWVHGPSSRTMSAVPANTYYSFQGQNQQPGGFRQNQQPSQQHFGS 791

Query: 30   PGYPSPHHSQ 1
             GYP+ +HSQ
Sbjct: 792  LGYPNFYHSQ 801


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