BLASTX nr result

ID: Coptis21_contig00021885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021885
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37733.3| unnamed protein product [Vitis vinifera]              319   7e-85
ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vin...   319   7e-85
ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinu...   314   2e-83
emb|CAN64711.1| hypothetical protein VITISV_043726 [Vitis vinifera]   314   2e-83
ref|XP_002272859.1| PREDICTED: glutamate receptor 3.3 [Vitis vin...   305   1e-80

>emb|CBI37733.3| unnamed protein product [Vitis vinifera]
          Length = 1147

 Score =  319 bits (817), Expect = 7e-85
 Identities = 171/260 (65%), Positives = 199/260 (76%), Gaps = 6/260 (2%)
 Frame = -2

Query: 982  INSSYTASLTSILTVQKLSSPIKGMESLITSTNPIGFQVGSFAENYLIEELNIAKSRLIA 803
            INSSYTASLTSILTVQ+LSS IKG+E+LITS + IGFQVGSFAENYL +EL+I KSRLIA
Sbjct: 886  INSSYTASLTSILTVQQLSSSIKGIETLITSNDRIGFQVGSFAENYLSDELDIPKSRLIA 945

Query: 802  LGSPEEYATALERGRVSAIVDELPYVEAFLSGHCKFSAVGQVFTKSGWGFAFPRDSPLAV 623
            LGSPEEYATALE G V+A+VDE PY+E FL+ HCKFS VG  FT+SGWGFAFPRDS L V
Sbjct: 946  LGSPEEYATALENGTVAAVVDERPYIEVFLASHCKFSIVGPQFTRSGWGFAFPRDSSLTV 1005

Query: 622  DLSTAILTLSENGDLQRIHDKWLTRKACTKDTEIASDRLHLRSFWGLFLICGVACFLALL 443
            DLSTAILTLSENGDLQRIHDKWL  K C+ ++++ SD+L  +SFWGLFLICG+ACFLALL
Sbjct: 1006 DLSTAILTLSENGDLQRIHDKWLKNKVCSDNSQLGSDQLQFQSFWGLFLICGIACFLALL 1065

Query: 442  VYFISTVRQFRRFXXXXXXXXXXXXXXXXXLQTFLSFVDDKEE-TVSKSKRKSID----- 281
            VYF   VRQF +                  LQTFLSFVD+K E + +KSKRK  D     
Sbjct: 1066 VYFCMMVRQFSK-QFSEASPSSHGSSLSARLQTFLSFVDNKAEVSKAKSKRKRGDMSLDS 1124

Query: 280  NVQDDESRSGSKRRQLETSP 221
            N ++D+SR+GS R +    P
Sbjct: 1125 NGREDKSRNGSTRTKQTDLP 1144


>ref|XP_002279899.1| PREDICTED: glutamate receptor 3.2 [Vitis vinifera]
          Length = 917

 Score =  319 bits (817), Expect = 7e-85
 Identities = 171/260 (65%), Positives = 199/260 (76%), Gaps = 6/260 (2%)
 Frame = -2

Query: 982  INSSYTASLTSILTVQKLSSPIKGMESLITSTNPIGFQVGSFAENYLIEELNIAKSRLIA 803
            INSSYTASLTSILTVQ+LSS IKG+E+LITS + IGFQVGSFAENYL +EL+I KSRLIA
Sbjct: 656  INSSYTASLTSILTVQQLSSSIKGIETLITSNDRIGFQVGSFAENYLSDELDIPKSRLIA 715

Query: 802  LGSPEEYATALERGRVSAIVDELPYVEAFLSGHCKFSAVGQVFTKSGWGFAFPRDSPLAV 623
            LGSPEEYATALE G V+A+VDE PY+E FL+ HCKFS VG  FT+SGWGFAFPRDS L V
Sbjct: 716  LGSPEEYATALENGTVAAVVDERPYIEVFLASHCKFSIVGPQFTRSGWGFAFPRDSSLTV 775

Query: 622  DLSTAILTLSENGDLQRIHDKWLTRKACTKDTEIASDRLHLRSFWGLFLICGVACFLALL 443
            DLSTAILTLSENGDLQRIHDKWL  K C+ ++++ SD+L  +SFWGLFLICG+ACFLALL
Sbjct: 776  DLSTAILTLSENGDLQRIHDKWLKNKVCSDNSQLGSDQLQFQSFWGLFLICGIACFLALL 835

Query: 442  VYFISTVRQFRRFXXXXXXXXXXXXXXXXXLQTFLSFVDDKEE-TVSKSKRKSID----- 281
            VYF   VRQF +                  LQTFLSFVD+K E + +KSKRK  D     
Sbjct: 836  VYFCMMVRQFSK-QFSEASPSSHGSSLSARLQTFLSFVDNKAEVSKAKSKRKRGDMSLDS 894

Query: 280  NVQDDESRSGSKRRQLETSP 221
            N ++D+SR+GS R +    P
Sbjct: 895  NGREDKSRNGSTRTKQTDLP 914


>ref|XP_002520606.1| glutamate receptor 3 plant, putative [Ricinus communis]
            gi|223540205|gb|EEF41779.1| glutamate receptor 3 plant,
            putative [Ricinus communis]
          Length = 924

 Score =  314 bits (805), Expect = 2e-83
 Identities = 167/265 (63%), Positives = 204/265 (76%), Gaps = 6/265 (2%)
 Frame = -2

Query: 982  INSSYTASLTSILTVQKLSSPIKGMESLITSTNPIGFQVGSFAENYLIEELNIAKSRLIA 803
            INSSYTASLTSILTVQ+LSSPIKG+++L+TS+  IG+QVGSFAENYL EELNIAK+RL+A
Sbjct: 656  INSSYTASLTSILTVQQLSSPIKGIDTLVTSSEHIGYQVGSFAENYLNEELNIAKTRLVA 715

Query: 802  LGSPEEYATALERGRVSAIVDELPYVEAFLSGHCKFSAVGQVFTKSGWGFAFPRDSPLAV 623
            LGSPEEYA+AL  G V+A+VDE PYV+ FLS HC+FS  GQ FTKSGWGFAFPRDSPLA+
Sbjct: 716  LGSPEEYASALANGTVAAVVDERPYVDLFLSDHCQFSIRGQEFTKSGWGFAFPRDSPLAM 775

Query: 622  DLSTAILTLSENGDLQRIHDKWLTRKACTKD-TEIASDRLHLRSFWGLFLICGVACFLAL 446
            D+STAILTLSE GDLQ+IHDKWL RK C+   ++  S++L L+SFWGLFLICG+ACFLAL
Sbjct: 776  DISTAILTLSETGDLQKIHDKWLARKVCSSQISDSGSEQLQLQSFWGLFLICGIACFLAL 835

Query: 445  LVYFISTVRQFRRFXXXXXXXXXXXXXXXXXLQTFLSFVDDK-EETVSKSKRK----SID 281
             +YF   +RQF R                  +QTFLSFVD+K +E+ SKSKRK    SI 
Sbjct: 836  FIYFCMMLRQFSR-HAPEDSDPSIRSSRSRRIQTFLSFVDEKADESKSKSKRKRGDESIG 894

Query: 280  NVQDDESRSGSKRRQLETSPD*HAN 206
              ++D+S  GS R Q + S + H++
Sbjct: 895  YGKEDDSVDGSDRIQRDISQERHSS 919


>emb|CAN64711.1| hypothetical protein VITISV_043726 [Vitis vinifera]
          Length = 959

 Score =  314 bits (804), Expect = 2e-83
 Identities = 169/260 (65%), Positives = 197/260 (75%), Gaps = 6/260 (2%)
 Frame = -2

Query: 982  INSSYTASLTSILTVQKLSSPIKGMESLITSTNPIGFQVGSFAENYLIEELNIAKSRLIA 803
            INSSYTASLTSILTVQ+LSS IKG+E+LITS + IGFQVGSFAENYL +EL+I KSRLI 
Sbjct: 698  INSSYTASLTSILTVQQLSSSIKGIETLITSNDRIGFQVGSFAENYLSDELDIPKSRLIP 757

Query: 802  LGSPEEYATALERGRVSAIVDELPYVEAFLSGHCKFSAVGQVFTKSGWGFAFPRDSPLAV 623
            LGSPEEYATALE G V+A+VDE PY+E FL+ HCKFS VG  FT+SGWGFAF RDS L V
Sbjct: 758  LGSPEEYATALENGTVAAVVDERPYIEVFLASHCKFSIVGPQFTRSGWGFAFXRDSSLTV 817

Query: 622  DLSTAILTLSENGDLQRIHDKWLTRKACTKDTEIASDRLHLRSFWGLFLICGVACFLALL 443
            DLSTAILTLSENGDLQRIHDKWL  K C+ ++++ SD+L  +SFWGLFLICG+ACFLALL
Sbjct: 818  DLSTAILTLSENGDLQRIHDKWLKNKVCSDNSQLGSDQLQFQSFWGLFLICGIACFLALL 877

Query: 442  VYFISTVRQFRRFXXXXXXXXXXXXXXXXXLQTFLSFVDDKEE-TVSKSKRKSID----- 281
            VYF   VRQF +                  LQTFLSFVD+K E + +KSKRK  D     
Sbjct: 878  VYFCMMVRQFSK-QFSEASPSSHGSSRSARLQTFLSFVDNKAEVSKAKSKRKRGDMSLDS 936

Query: 280  NVQDDESRSGSKRRQLETSP 221
            N ++D+SR+GS R +    P
Sbjct: 937  NGREDKSRNGSTRTKQTDLP 956


>ref|XP_002272859.1| PREDICTED: glutamate receptor 3.3 [Vitis vinifera]
            gi|297745576|emb|CBI40741.3| unnamed protein product
            [Vitis vinifera]
          Length = 934

 Score =  305 bits (781), Expect = 1e-80
 Identities = 161/264 (60%), Positives = 196/264 (74%), Gaps = 11/264 (4%)
 Frame = -2

Query: 982  INSSYTASLTSILTVQKLSSPIKGMESLITSTNPIGFQVGSFAENYLIEELNIAKSRLIA 803
            INSSYTASLTSILTVQ+LSSPIKG+ESLI S +PIG+QVGSFAE+YL EELNI++SRL+A
Sbjct: 662  INSSYTASLTSILTVQQLSSPIKGVESLINSNDPIGYQVGSFAEHYLSEELNISESRLVA 721

Query: 802  LGSPEEYATALE----RGRVSAIVDELPYVEAFLSGHCKFSAVGQVFTKSGWGFAFPRDS 635
            LGSPEEYA AL+    +G V+A+VDE PYVE FLS  CKF  VGQ FTKSGWGF FPRDS
Sbjct: 722  LGSPEEYAKALQNGPGKGGVAAVVDERPYVELFLSTQCKFRIVGQEFTKSGWGFVFPRDS 781

Query: 634  PLAVDLSTAILTLSENGDLQRIHDKWLTRKACTKD-TEIASDRLHLRSFWGLFLICGVAC 458
            PLAVD+STAIL LSENGDLQRIHDKWL   AC+ + TE+ SDRLHL+SFWGLFLICG+AC
Sbjct: 782  PLAVDMSTAILALSENGDLQRIHDKWLATSACSSESTELESDRLHLKSFWGLFLICGLAC 841

Query: 457  FLALLVYFISTVRQFRRFXXXXXXXXXXXXXXXXXLQTFLSFVDDKE-ETVSKSKRKSI- 284
            F+AL++YF   +R+FR                   LQT  S +DD+   T +  K++ I 
Sbjct: 842  FVALVIYFFQILRKFRNAAAVGANSTGTGSSRSGHLQTLFSLMDDRSGHTKTGHKKRRIE 901

Query: 283  ----DNVQDDESRSGSKRRQLETS 224
                +N ++DE +S  K++ +  S
Sbjct: 902  RSLSENDKEDELKSNPKKKPIRNS 925


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