BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021883
         (218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542095.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-18
ref|XP_003546486.1| PREDICTED: pentatricopeptide repeat-containi...    74   2e-18
gb|ACU23208.1| unknown [Glycine max]                                   74   2e-18
ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|2...    70   7e-18
ref|XP_002514778.1| pentatricopeptide repeat-containing protein,...    73   2e-17

>ref|XP_003542095.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like [Glycine max]
          Length = 539

 Score = 74.3 bits (181), Expect(2) = 2e-18
 Identities = 33/44 (75%), Positives = 39/44 (88%)
 Frame = -3

Query: 132 VSEAKKKHAKLSPVMFHILARGYCELEEFDKALELLIEMKDYGV 1
           ++EAKKKH KL PVMFH L RGYC+LE+FD+AL+LL EMKDYGV
Sbjct: 430 LAEAKKKHVKLGPVMFHTLIRGYCKLEQFDEALKLLAEMKDYGV 473



 Score = 42.7 bits (99), Expect(2) = 2e-18
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = -2

Query: 217 ESRGLRPNVSTYSVLLSGYVKGGQMDEAR 131
           ESRGLRP+V TY+VL S Y  GG+M+EA+
Sbjct: 399 ESRGLRPDVYTYTVLASAYSNGGEMEEAQ 427


>ref|XP_003546486.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like isoform 1 [Glycine max]
           gi|356556346|ref|XP_003546487.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g02650,
           mitochondrial-like isoform 2 [Glycine max]
          Length = 538

 Score = 74.3 bits (181), Expect(2) = 2e-18
 Identities = 33/44 (75%), Positives = 39/44 (88%)
 Frame = -3

Query: 132 VSEAKKKHAKLSPVMFHILARGYCELEEFDKALELLIEMKDYGV 1
           ++E KKKHAKL PVMFH L RGYC+LE+FD+AL+LL EMKDYGV
Sbjct: 429 LAEVKKKHAKLGPVMFHTLIRGYCKLEQFDEALKLLAEMKDYGV 472



 Score = 42.7 bits (99), Expect(2) = 2e-18
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = -2

Query: 217 ESRGLRPNVSTYSVLLSGYVKGGQMDEAR 131
           ESRGLRP+V TY+VL S Y  GG+M+EA+
Sbjct: 398 ESRGLRPDVYTYTVLASAYSNGGEMEEAQ 426


>gb|ACU23208.1| unknown [Glycine max]
          Length = 177

 Score = 74.3 bits (181), Expect(2) = 2e-18
 Identities = 33/44 (75%), Positives = 39/44 (88%)
 Frame = -3

Query: 132 VSEAKKKHAKLSPVMFHILARGYCELEEFDKALELLIEMKDYGV 1
           ++E KKKHAKL PVMFH L RGYC+LE+FD+AL+LL EMKDYGV
Sbjct: 68  LAEVKKKHAKLGPVMFHTLIRGYCKLEQFDEALKLLAEMKDYGV 111



 Score = 42.7 bits (99), Expect(2) = 2e-18
 Identities = 19/29 (65%), Positives = 24/29 (82%)
 Frame = -2

Query: 217 ESRGLRPNVSTYSVLLSGYVKGGQMDEAR 131
           ESRGLRP+V TY+VL S Y  GG+M+EA+
Sbjct: 37  ESRGLRPDVYTYTVLASAYSNGGEMEEAQ 65


>ref|XP_002300357.1| predicted protein [Populus trichocarpa] gi|222847615|gb|EEE85162.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score = 70.1 bits (170), Expect(2) = 7e-18
 Identities = 31/44 (70%), Positives = 39/44 (88%)
 Frame = -3

Query: 132 VSEAKKKHAKLSPVMFHILARGYCELEEFDKALELLIEMKDYGV 1
           +SEAKKKH+KLSPV +H L RGYC+L++FDKALELL EM+ +GV
Sbjct: 368 LSEAKKKHSKLSPVTYHALIRGYCKLDQFDKALELLAEMEKFGV 411



 Score = 45.1 bits (105), Expect(2) = 7e-18
 Identities = 19/28 (67%), Positives = 25/28 (89%)
 Frame = -2

Query: 217 ESRGLRPNVSTYSVLLSGYVKGGQMDEA 134
           ESRGL+P+V TY+V++SGY  GGQM+EA
Sbjct: 337 ESRGLKPDVYTYTVIISGYSNGGQMEEA 364


>ref|XP_002514778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545829|gb|EEF47332.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 584

 Score = 72.8 bits (177), Expect(2) = 2e-17
 Identities = 32/44 (72%), Positives = 40/44 (90%)
 Frame = -3

Query: 132 VSEAKKKHAKLSPVMFHILARGYCELEEFDKALELLIEMKDYGV 1
           +SEAKKKH+KLSPVM+H + RGYC+LE+FDKAL+LL EMK +GV
Sbjct: 476 LSEAKKKHSKLSPVMYHTVIRGYCKLEQFDKALDLLAEMKTFGV 519



 Score = 41.2 bits (95), Expect(2) = 2e-17
 Identities = 16/26 (61%), Positives = 23/26 (88%)
 Frame = -2

Query: 211 RGLRPNVSTYSVLLSGYVKGGQMDEA 134
           RGL+P++ TY+V++SGY  GGQM+EA
Sbjct: 447 RGLKPDLFTYAVIMSGYASGGQMEEA 472