BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021878
         (832 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511990.1| Single-stranded DNA-binding protein, mitocho...   246   6e-63
ref|XP_002270678.1| PREDICTED: single-stranded DNA-binding prote...   235   1e-59
ref|XP_002885264.1| single-strand-binding family protein [Arabid...   233   4e-59
ref|NP_188488.1| single-strand DNA-binding protein [Arabidopsis ...   233   5e-59
ref|NP_001043691.1| Os01g0642900 [Oryza sativa Japonica Group] g...   229   4e-58

>ref|XP_002511990.1| Single-stranded DNA-binding protein, mitochondrial precursor,
           putative [Ricinus communis] gi|223549170|gb|EEF50659.1|
           Single-stranded DNA-binding protein, mitochondrial
           precursor, putative [Ricinus communis]
          Length = 223

 Score =  246 bits (627), Expect = 6e-63
 Identities = 112/157 (71%), Positives = 138/157 (87%)
 Frame = -3

Query: 653 TNEQRPTFQRPLENGLDTGVYKAILVGQVGQLPFQKRLKSGRPVTLFSLGTGGIRNNRRP 474
           ++ QR  +QRPLENGLD GVYKAILVGQVGQ P QK+L+SG+ VT+FSLGTGGIRNNRRP
Sbjct: 67  SSPQREVYQRPLENGLDLGVYKAILVGQVGQSPLQKKLRSGKSVTMFSLGTGGIRNNRRP 126

Query: 473 LDNEEPREYADRCSVQWHRVCVYPERLGALALNHIKPGSTMYLEGNLETKIFNDPISGLV 294
           + NEEPREYA+RC+VQWHRV VYPERLG++ + H+ PGS MYLEGNLETK+F DPI+GLV
Sbjct: 127 MQNEEPREYANRCAVQWHRVSVYPERLGSIVMKHLLPGSIMYLEGNLETKVFTDPITGLV 186

Query: 293 RRIREIAIRRDGRLVFLSKDGDTGESNRADMKGVGYF 183
           RRIRE+AIR+DGR+VFL+K GD  E++  ++KG+GY+
Sbjct: 187 RRIREVAIRQDGRIVFLAKGGDEKEASSKELKGLGYY 223


>ref|XP_002270678.1| PREDICTED: single-stranded DNA-binding protein, mitochondrial
           [Vitis vinifera] gi|296088446|emb|CBI37437.3| unnamed
           protein product [Vitis vinifera]
          Length = 221

 Score =  235 bits (599), Expect = 1e-59
 Identities = 107/158 (67%), Positives = 131/158 (82%)
 Frame = -3

Query: 656 NTNEQRPTFQRPLENGLDTGVYKAILVGQVGQLPFQKRLKSGRPVTLFSLGTGGIRNNRR 477
           +T + R    RPLENGLD G+YKAILVG+ GQ P QKRL+SGR VTLFS+GTGGIRNNRR
Sbjct: 64  DTTQNRMVVDRPLENGLDVGIYKAILVGKAGQTPLQKRLRSGRMVTLFSVGTGGIRNNRR 123

Query: 476 PLDNEEPREYADRCSVQWHRVCVYPERLGALALNHIKPGSTMYLEGNLETKIFNDPISGL 297
           PLDNE+P+EYA+R +VQWHRV VYPE LG + + H+ PGS +YLEGNLETKIF DP++GL
Sbjct: 124 PLDNEDPKEYANRSAVQWHRVTVYPENLGNIVMKHVSPGSVLYLEGNLETKIFTDPVTGL 183

Query: 296 VRRIREIAIRRDGRLVFLSKDGDTGESNRADMKGVGYF 183
           VRRIRE+AIRR+GRLVFL K GD  +++  ++KG GY+
Sbjct: 184 VRRIREVAIRRNGRLVFLGKGGDGDQASNVELKGAGYY 221


>ref|XP_002885264.1| single-strand-binding family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297331104|gb|EFH61523.1|
           single-strand-binding family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 223

 Score =  233 bits (594), Expect = 4e-59
 Identities = 109/157 (69%), Positives = 135/157 (85%)
 Frame = -3

Query: 653 TNEQRPTFQRPLENGLDTGVYKAILVGQVGQLPFQKRLKSGRPVTLFSLGTGGIRNNRRP 474
           + E+R   +RPLENGLD+G++KAILVGQVGQLP QK+LKSGR VTLFS+GTGGIRNNRRP
Sbjct: 67  SGEERVMEERPLENGLDSGIFKAILVGQVGQLPLQKKLKSGRTVTLFSVGTGGIRNNRRP 126

Query: 473 LDNEEPREYADRCSVQWHRVCVYPERLGALALNHIKPGSTMYLEGNLETKIFNDPISGLV 294
           L NE+PREYA R +VQWHRV VYPERL  L L +++PG+ +YLEGNLETKIF DP++GLV
Sbjct: 127 LINEDPREYASRSAVQWHRVSVYPERLAELVLKNVEPGTVIYLEGNLETKIFTDPVTGLV 186

Query: 293 RRIREIAIRRDGRLVFLSKDGDTGESNRADMKGVGYF 183
           RRIRE+AIRR+GR+VFL K GD  + + A+++GVGY+
Sbjct: 187 RRIREVAIRRNGRVVFLGKAGDMQQPSSAELRGVGYY 223


>ref|NP_188488.1| single-strand DNA-binding protein [Arabidopsis thaliana]
           gi|9294319|dbj|BAB02216.1| unnamed protein product
           [Arabidopsis thaliana] gi|332642598|gb|AEE76119.1|
           single-strand DNA-binding protein [Arabidopsis thaliana]
          Length = 217

 Score =  233 bits (593), Expect = 5e-59
 Identities = 109/157 (69%), Positives = 135/157 (85%)
 Frame = -3

Query: 653 TNEQRPTFQRPLENGLDTGVYKAILVGQVGQLPFQKRLKSGRPVTLFSLGTGGIRNNRRP 474
           + E+R   +RPLENGLD+G++KAILVGQVGQLP QK+LKSGR VTLFS+GTGGIRNNRRP
Sbjct: 61  SGEERVMEERPLENGLDSGIFKAILVGQVGQLPLQKKLKSGRTVTLFSVGTGGIRNNRRP 120

Query: 473 LDNEEPREYADRCSVQWHRVCVYPERLGALALNHIKPGSTMYLEGNLETKIFNDPISGLV 294
           L NE+PREYA R +VQWHRV VYPERL  L L +++PG+ +YLEGNLETKIF DP++GLV
Sbjct: 121 LINEDPREYASRSAVQWHRVSVYPERLADLVLKNVEPGTVIYLEGNLETKIFTDPVTGLV 180

Query: 293 RRIREIAIRRDGRLVFLSKDGDTGESNRADMKGVGYF 183
           RRIRE+AIRR+GR+VFL K GD  + + A+++GVGY+
Sbjct: 181 RRIREVAIRRNGRVVFLGKAGDMQQPSSAELRGVGYY 217


>ref|NP_001043691.1| Os01g0642900 [Oryza sativa Japonica Group]
           gi|55297106|dbj|BAD68750.1| single-strand DNA binding
           protein-like [Oryza sativa Japonica Group]
           gi|113533222|dbj|BAF05605.1| Os01g0642900 [Oryza sativa
           Japonica Group] gi|125571356|gb|EAZ12871.1| hypothetical
           protein OsJ_02792 [Oryza sativa Japonica Group]
           gi|215686631|dbj|BAG88884.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215707058|dbj|BAG93518.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 224

 Score =  229 bits (585), Expect = 4e-58
 Identities = 109/148 (73%), Positives = 127/148 (85%)
 Frame = -3

Query: 626 RPLENGLDTGVYKAILVGQVGQLPFQKRLKSGRPVTLFSLGTGGIRNNRRPLDNEEPREY 447
           RPLENGLD G+YKAI+VG+VGQ P QKRL+SGR V LFSLGTGGIRNNRRPLD EEP +Y
Sbjct: 79  RPLENGLDPGIYKAIMVGKVGQEPIQKRLRSGRTVVLFSLGTGGIRNNRRPLDREEPHQY 138

Query: 446 ADRCSVQWHRVCVYPERLGALALNHIKPGSTMYLEGNLETKIFNDPISGLVRRIREIAIR 267
           A+RCSVQWHRVC+YPERLG+LAL H+K GS +YLEGNLETK+F+DPI+GLVRRIREIA+R
Sbjct: 139 AERCSVQWHRVCIYPERLGSLALKHVKTGSVLYLEGNLETKVFSDPITGLVRRIREIAVR 198

Query: 266 RDGRLVFLSKDGDTGESNRADMKGVGYF 183
            +GRL+FL  D +  +   A  KGVGYF
Sbjct: 199 SNGRLLFLGNDCNAPKLGEA--KGVGYF 224