BLASTX nr result

ID: Coptis21_contig00021874 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021874
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279061.1| PREDICTED: uncharacterized protein LOC100261...    83   2e-14
ref|XP_002309203.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
ref|XP_002514089.1| conserved hypothetical protein [Ricinus comm...    60   1e-07
ref|XP_002521366.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_002329058.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07

>ref|XP_002279061.1| PREDICTED: uncharacterized protein LOC100261010 [Vitis vinifera]
          Length = 555

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 49/103 (47%), Positives = 64/103 (62%)
 Frame = -2

Query: 309 FGYSEQRIHDSTDNSNSDIVGRLKRSSSSYPDLRQESSWASPDENWRFFDDSYVYNQRLG 130
           F +S+++I+D    S S    RL+RSSSSYPDLRQES W + D+  RFFDD  V N R  
Sbjct: 123 FEFSDRKIYDPPIQSGSV---RLRRSSSSYPDLRQESLWGAGDDRRRFFDDFEVNNYRSP 179

Query: 129 SSSVPRQRHGQGAKVVEDSGIKTIRVDTYVNRKQELPSPSPSP 1
           +SS   +RH +     +DS +K I VDT+  R    PSPSP+P
Sbjct: 180 ASSDYVRRHRRSELERDDSEVKVIPVDTFAVRSS--PSPSPAP 220


>ref|XP_002309203.1| predicted protein [Populus trichocarpa] gi|222855179|gb|EEE92726.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
 Frame = -2

Query: 303 YSEQRIHDSTDNSN-------SDIVGRLKRSSSSYPDLRQESSWASPDENWRFFDDSYVY 145
           +S+ +I+ +T+NS        +    RLK +S SYPDL Q+S W +PD+ +RFFDD  + 
Sbjct: 109 FSDPKIYANTNNSTPLGGTATAATGDRLKMNSRSYPDLMQDSFWETPDDRFRFFDDFEIN 168

Query: 144 NQRLGSSSVPRQRHGQGAKVVEDSGIKTIRVDTYVN-RKQELPSPSP 7
             R   S +  +RH  G  V E+S +K I VDT+V+    +L SP P
Sbjct: 169 KYR---SPIHHRRHRNG--VFEESCVKDIPVDTFVSCSSSKLQSPPP 210


>ref|XP_002514089.1| conserved hypothetical protein [Ricinus communis]
           gi|223546545|gb|EEF48043.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 831

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 40/98 (40%), Positives = 54/98 (55%), Gaps = 6/98 (6%)
 Frame = -2

Query: 282 DSTDNSNSDIVGRLKRSSSSYPDLRQESSWASPD--ENWRFFDD---SYVYNQRLGSSSV 118
           D    +++  + RLKRSSSSYPDLRQES W S D  + +RFFDD   S   +     +++
Sbjct: 114 DDNQFASATPMRRLKRSSSSYPDLRQESLWQSGDDIDRFRFFDDFELSKFRSSEYSHNNI 173

Query: 117 PRQRHGQGAKVVEDS-GIKTIRVDTYVNRKQELPSPSP 7
              R  +     +DS  +K I VDTYV R     SP+P
Sbjct: 174 YHHRRQRSYVFDQDSTTVKEIPVDTYVLRSSPPKSPAP 211


>ref|XP_002521366.1| conserved hypothetical protein [Ricinus communis]
           gi|223539444|gb|EEF41034.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 553

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 41/118 (34%), Positives = 57/118 (48%), Gaps = 17/118 (14%)
 Frame = -2

Query: 303 YSEQRIHDSTDNSNSDIVGRLKRSSSSYPDLRQESSWASPDENWRFFDDSYV-------- 148
           Y + +  D T + N+    RL RS  SYPDLRQES W++ DE WRF+DD+ V        
Sbjct: 137 YDDGQYQDRTASYNT--FNRL-RSFRSYPDLRQESLWSNNDERWRFYDDTRVNGYKFSSP 193

Query: 147 -YNQRLGSSSVPRQR--------HGQGAKVVEDSGIKTIRVDTYVNRKQELPSPSPSP 1
            +   L     P+Q+          Q  +  +D   K I VDT+V  K+E+    P P
Sbjct: 194 LHQDELQDDHPPQQQQQEQDQEPRKQDQEQEQDVSTKDIAVDTFVIHKEEVVQTPPPP 251


>ref|XP_002329058.1| predicted protein [Populus trichocarpa] gi|222839729|gb|EEE78052.1|
           predicted protein [Populus trichocarpa]
          Length = 560

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
 Frame = -2

Query: 237 RSSSSYPDLRQESSWASPDENWRFFDDSYVYNQRLGSSSVPRQRH-----GQGAKVVEDS 73
           RS SSYPDLRQES      E WRF+DD+++ N R  +SS     H      +  K  E  
Sbjct: 155 RSFSSYPDLRQESL-----ERWRFYDDTHLNNYRFSTSSDQIHHHYPQQVEETKKQEEGV 209

Query: 72  GIKTIRVDTYVNRKQELPSPSPSP 1
           G+K I VDT+V  ++E+  PS  P
Sbjct: 210 GVKDIDVDTFVINQKEVSYPSSPP 233


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