BLASTX nr result

ID: Coptis21_contig00021851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021851
         (1964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309032.1| predicted protein [Populus trichocarpa] gi|2...   573   e-161
ref|XP_002331392.1| predicted protein [Populus trichocarpa] gi|2...   571   e-160
ref|XP_002267030.1| PREDICTED: chloroplast envelope membrane pro...   567   e-159
ref|XP_003516797.1| PREDICTED: chloroplast envelope membrane pro...   565   e-158
ref|XP_003532317.1| PREDICTED: chloroplast envelope membrane pro...   560   e-157

>ref|XP_002309032.1| predicted protein [Populus trichocarpa] gi|222855008|gb|EEE92555.1|
            predicted protein [Populus trichocarpa]
          Length = 443

 Score =  573 bits (1478), Expect = e-161
 Identities = 290/445 (65%), Positives = 348/445 (78%), Gaps = 20/445 (4%)
 Frame = +2

Query: 326  MSTSLVLCQNFVTRYDRN---LRRKKLPSCRISTSLVSLVTKRRRFSGVIVNASH----- 481
            M+TS+VLC N     + N   LR + L +   S SL   ++ RRRF GV   A       
Sbjct: 1    MTTSIVLCNNLSFNTNHNQTPLRNRNLFAKSSSFSLQ--LSNRRRFCGVFPKAKKNGKNH 58

Query: 482  -RRKRAWWKEFFLDEDGNWFGLKDDNMVEEEI---ESSNEDGLSEEERFEAWKRRAEAIS 649
             +RKR WW+ FF DEDGNWFGLKDD++++ E    E+S+++ LSEEE+FEAWKRRAEAI 
Sbjct: 59   SKRKRNWWRRFFFDEDGNWFGLKDDDLLDAEADFSENSSDEELSEEEKFEAWKRRAEAIV 118

Query: 650  ELREAQEDVRNSENRKWEDWLVEGPLEEVGSSSWGQDWADGMDESSG--------DVRAD 805
            ELREAQED+ N ++R+WEDW+V+        +S G  W+   D + G        D R+D
Sbjct: 119  ELREAQEDMLNEDSRRWEDWIVDYGDNGHDDASNGSWWSQEFDGNGGIGNGGSVEDARSD 178

Query: 806  PSEMVFGEGLVEEIRALVLGKEEGEFTYEERVFNYASSNSAKFLALLVIIPWTLDFVVHD 985
            P+++V  +G VE +R LVLG+EE +  YE+RVF YAS NSAKFLA+L+IIPW LDF VHD
Sbjct: 179  PTDLVPEKGFVESVRDLVLGREEEDLLYEDRVFRYASLNSAKFLAVLIIIPWALDFAVHD 238

Query: 986  YVLMPFLDRYVKTVPLAAEFFDVRRSQKLEMVNTIKVERARFRFEAEIGKSPPLSDEEVW 1165
            YVLMPFLDRYVKTVPLAA+  DVR+SQKLEM+  +KVE+AR   E EIGKSPPLSDEE W
Sbjct: 239  YVLMPFLDRYVKTVPLAAQMLDVRKSQKLEMIKELKVEKARLLLEVEIGKSPPLSDEEEW 298

Query: 1166 LELRHKALELRDEWRLENRRAFANILSDMVFGITVFILLYFNQTKVALLKFTGYKIINNV 1345
             ELRHKALELRD+WRLENRR+FANI SDMVFGI++FILLYFNQ+KVALLKFTGYKI+NNV
Sbjct: 299  WELRHKALELRDDWRLENRRSFANIWSDMVFGISIFILLYFNQSKVALLKFTGYKILNNV 358

Query: 1346 SDTGKAFLIILLTDIFLGYHSESGWQTLVELIVEHYGLEVDQAALTIFVCTVPVVMDACV 1525
            +D GKAFLIIL+TDIFLGYHSESGWQTL+++IVEHYGLEVDQ+A+TIF+C VPVV+DACV
Sbjct: 359  TDIGKAFLIILITDIFLGYHSESGWQTLLDVIVEHYGLEVDQSAITIFICLVPVVIDACV 418

Query: 1526 KLWLFKYLPRLSPRVTNIFREMTRH 1600
            KLWLFKYLPRLSPRV NIFREM RH
Sbjct: 419  KLWLFKYLPRLSPRVANIFREMKRH 443


>ref|XP_002331392.1| predicted protein [Populus trichocarpa] gi|222873606|gb|EEF10737.1|
            predicted protein [Populus trichocarpa]
          Length = 440

 Score =  571 bits (1471), Expect = e-160
 Identities = 284/440 (64%), Positives = 342/440 (77%), Gaps = 19/440 (4%)
 Frame = +2

Query: 338  LVLCQN--FVTRYDRNLRRKKLPSCRISTSLVSLVTKRRRFSGVIVNASHR------RKR 493
            +VLC N  F T   +N  R +    +    L+    K R F GV+ NA  +      RKR
Sbjct: 1    MVLCNNLSFNTNQSQNPPRNRNSLTKSYRLLLQFGNKSRGFCGVVANAKKKGENHSKRKR 60

Query: 494  AWWKEFFLDEDGNWFGLKDDNMVEEEIE---SSNEDGLSEEERFEAWKRRAEAISELREA 664
             WW+ FF+DE+GNW GLKDD+M++ E E   +S+++ LSEEE+FEAWKRRAEAI +LREA
Sbjct: 61   GWWQRFFIDEEGNWLGLKDDDMLDAEAELSENSSDEELSEEEKFEAWKRRAEAIVDLREA 120

Query: 665  QEDVRNSENRKWEDWLVEGPLEEVGSSSWGQDWADGMDESSG--------DVRADPSEMV 820
            QED+ N E+RKWEDW+V+         S G  W+   D + G        DVR+DP+++V
Sbjct: 121  QEDMLNEESRKWEDWIVDYGDNGHDDDSNGSWWSKEYDGNGGIGNGGSVEDVRSDPTDLV 180

Query: 821  FGEGLVEEIRALVLGKEEGEFTYEERVFNYASSNSAKFLALLVIIPWTLDFVVHDYVLMP 1000
              +G VE +R LV G+EE +  YE+RVF YAS NSAKFLA+L+IIPW LDF VHDYVLMP
Sbjct: 181  REKGFVESVRDLVFGREEEDLLYEDRVFRYASLNSAKFLAVLIIIPWALDFAVHDYVLMP 240

Query: 1001 FLDRYVKTVPLAAEFFDVRRSQKLEMVNTIKVERARFRFEAEIGKSPPLSDEEVWLELRH 1180
            FLDRYVKTVPLAA+  DVR++QKLEM+  IK+E+AR + E EIGKSPPLSDEE W ELRH
Sbjct: 241  FLDRYVKTVPLAAQMLDVRKNQKLEMIKEIKLEKARLKLEVEIGKSPPLSDEEEWRELRH 300

Query: 1181 KALELRDEWRLENRRAFANILSDMVFGITVFILLYFNQTKVALLKFTGYKIINNVSDTGK 1360
            KALELRDEWRLENRR+FANI SDMVFG+++F+LLYFNQ+KVALLKFTGYKI+NNVSDTGK
Sbjct: 301  KALELRDEWRLENRRSFANIWSDMVFGVSIFVLLYFNQSKVALLKFTGYKILNNVSDTGK 360

Query: 1361 AFLIILLTDIFLGYHSESGWQTLVELIVEHYGLEVDQAALTIFVCTVPVVMDACVKLWLF 1540
            AFLIIL+TDIFLGYHSESGWQTL+E+I EHYGLEVDQ+A+TIF+C VPVV+DACVKLWLF
Sbjct: 361  AFLIILITDIFLGYHSESGWQTLLEVIFEHYGLEVDQSAITIFICLVPVVIDACVKLWLF 420

Query: 1541 KYLPRLSPRVTNIFREMTRH 1600
            KYLPRLSP+V NIFREM RH
Sbjct: 421  KYLPRLSPKVANIFREMKRH 440


>ref|XP_002267030.1| PREDICTED: chloroplast envelope membrane protein [Vitis vinifera]
            gi|297736012|emb|CBI24050.3| unnamed protein product
            [Vitis vinifera]
          Length = 415

 Score =  567 bits (1461), Expect = e-159
 Identities = 287/426 (67%), Positives = 336/426 (78%), Gaps = 5/426 (1%)
 Frame = +2

Query: 338  LVLCQNFVTRYDRNLRRKKLPSCRISTSLVSLV-----TKRRRFSGVIVNASHRRKRAWW 502
            +VLC+N +      +RR    S     SL         T+RRR  G++   S R +R+WW
Sbjct: 1    MVLCENLIF-----IRRSSFHSHTHGLSLPQFTDSTRGTRRRRPLGLV--HSTRPRRSWW 53

Query: 503  KEFFLDEDGNWFGLKDDNMVEEEIESSNEDGLSEEERFEAWKRRAEAISELREAQEDVRN 682
            ++FF D+DGNW GLKD +MV+ E  SS E+ LSE ++FEAWKRRAEAI ELREAQED+RN
Sbjct: 54   QKFF-DDDGNWLGLKDGDMVDLEESSSEEEDLSETQKFEAWKRRAEAILELREAQEDIRN 112

Query: 683  SENRKWEDWLVEGPLEEVGSSSWGQDWADGMDESSGDVRADPSEMVFGEGLVEEIRALVL 862
             E R+WEDWLVEG  +    S W      G +   G    D   ++  +G VE +R LVL
Sbjct: 113  QEGRRWEDWLVEGSTDSHSDSDWVAGSHTGDEGGDG---GDLGGIIPDKGFVESVRDLVL 169

Query: 863  GKEEGEFTYEERVFNYASSNSAKFLALLVIIPWTLDFVVHDYVLMPFLDRYVKTVPLAAE 1042
            G+E+ E  YE+RVF YAS NSAKFLA+L+IIPW LDFVVHDYVLMPFLDRYVKTVPLAA+
Sbjct: 170  GREDDELLYEDRVFRYASFNSAKFLAVLLIIPWALDFVVHDYVLMPFLDRYVKTVPLAAK 229

Query: 1043 FFDVRRSQKLEMVNTIKVERARFRFEAEIGKSPPLSDEEVWLELRHKALELRDEWRLENR 1222
              DVRR QKLEMV  +K+ERARFR E EIGKSPPLSD+EVWLELRHKALELRDEWRLENR
Sbjct: 230  MLDVRRHQKLEMVKELKIERARFRLEVEIGKSPPLSDDEVWLELRHKALELRDEWRLENR 289

Query: 1223 RAFANILSDMVFGITVFILLYFNQTKVALLKFTGYKIINNVSDTGKAFLIILLTDIFLGY 1402
            RAFANI SDMVFGI++F LLYFNQ++VALLKFTGYKIINN+SDTGKAFLIIL+TDIFLGY
Sbjct: 290  RAFANIWSDMVFGISLFFLLYFNQSQVALLKFTGYKIINNISDTGKAFLIILITDIFLGY 349

Query: 1403 HSESGWQTLVELIVEHYGLEVDQAALTIFVCTVPVVMDACVKLWLFKYLPRLSPRVTNIF 1582
            HSESGWQTL+E++VEHYGLEVDQ+A+TIFVC +PVV+DACVKLWLFK+LPRLSPRV+NIF
Sbjct: 350  HSESGWQTLLEVVVEHYGLEVDQSAITIFVCLIPVVIDACVKLWLFKFLPRLSPRVSNIF 409

Query: 1583 REMTRH 1600
            REM RH
Sbjct: 410  REMKRH 415


>ref|XP_003516797.1| PREDICTED: chloroplast envelope membrane protein-like [Glycine max]
          Length = 433

 Score =  565 bits (1457), Expect = e-158
 Identities = 279/438 (63%), Positives = 345/438 (78%), Gaps = 10/438 (2%)
 Frame = +2

Query: 317  MFLMSTSLVLCQNFVTRYDRNLRRKKLPSCRISTSLVSLVTKRRRFSGVIVNAS----HR 484
            M LMS+S+VLC N +  +++ L  K   S   S  ++ L +K RR +G I  A     H 
Sbjct: 1    MILMSSSIVLCDNLIL-FNQKLLLKSFVSRGSSNFVIQLSSKTRRLNGFISKAEKHSGHS 59

Query: 485  RKRAWWKEFFLDEDGNWFGLKDDNMVEEEIESSNE----DGLSEEERFEAWKRRAEAISE 652
            RK +WW++FF ++DGNW GL+DD+MVE E E+  E      LSE ++FEAWK+RAEAI E
Sbjct: 60   RKSSWWQKFFFEDDGNWLGLRDDDMVEAEAEAEGEGESTQELSEGDKFEAWKQRAEAIVE 119

Query: 653  LREAQEDVRNSENRKWEDWLVEGPLE--EVGSSSWGQDWADGMDESSGDVRADPSEMVFG 826
            LREAQED RN   RKWEDWL++G     E  +SSW Q+  D  +    +VRAD  ++   
Sbjct: 120  LREAQEDGRNQAYRKWEDWLLDGDGTNGEDNTSSWEQEMRDYRE----NVRADSGDVPAE 175

Query: 827  EGLVEEIRALVLGKEEGEFTYEERVFNYASSNSAKFLALLVIIPWTLDFVVHDYVLMPFL 1006
            +G+VE  R L+ G+E+ +  YE+RVF YASSNSAKFLA+L+I+PW +DF+VHDY+LMPFL
Sbjct: 176  KGIVESARYLIFGREDDDMLYEDRVFQYASSNSAKFLAVLIIVPWAMDFLVHDYILMPFL 235

Query: 1007 DRYVKTVPLAAEFFDVRRSQKLEMVNTIKVERARFRFEAEIGKSPPLSDEEVWLELRHKA 1186
            DRYVKTVPLAA+  DVRR QKL+++  ++ ER RF  E EIGKSPPLSD+EVW ELRHKA
Sbjct: 236  DRYVKTVPLAAQMLDVRRYQKLQIIEELRTERGRFELEVEIGKSPPLSDDEVWWELRHKA 295

Query: 1187 LELRDEWRLENRRAFANILSDMVFGITVFILLYFNQTKVALLKFTGYKIINNVSDTGKAF 1366
            LELR+EWRLENRRAFANI SD V+GI++FI+LYFN++KVALLKFTGYKIINN+SDTGKAF
Sbjct: 296  LELREEWRLENRRAFANIWSDTVYGISLFIILYFNKSKVALLKFTGYKIINNISDTGKAF 355

Query: 1367 LIILLTDIFLGYHSESGWQTLVELIVEHYGLEVDQAALTIFVCTVPVVMDACVKLWLFKY 1546
            LIIL+TDIFLGYHSESGWQTL+E+IVEHYGLEVDQ+A+TIF+C +PVV+DACVKLWLFK+
Sbjct: 356  LIILITDIFLGYHSESGWQTLLEIIVEHYGLEVDQSAITIFICLIPVVIDACVKLWLFKF 415

Query: 1547 LPRLSPRVTNIFREMTRH 1600
            LPRLSPRVTNIFREM RH
Sbjct: 416  LPRLSPRVTNIFREMKRH 433


>ref|XP_003532317.1| PREDICTED: chloroplast envelope membrane protein-like [Glycine max]
          Length = 433

 Score =  560 bits (1443), Expect = e-157
 Identities = 275/434 (63%), Positives = 339/434 (78%), Gaps = 6/434 (1%)
 Frame = +2

Query: 317  MFLMSTSLVLCQNFVTRYDRNLRRKKLPSCRISTSLV-SLVTKRRRFSGVIVNAS-HRRK 490
            M LMS+S+VLC   +  +++ L  K   S   S++ V    +K RR +G I  A  H RK
Sbjct: 1    MILMSSSIVLCDKNLILFNQKLLLKSFVSHGSSSNFVIQFGSKTRRLNGFISKAEKHSRK 60

Query: 491  RAWWKEFFLDEDGNWFGLKDDNMVEEEIESSNE----DGLSEEERFEAWKRRAEAISELR 658
             +WW+ FF ++DGNW GL+DD+M E E E+  E      LSE ++FEAWKRRAEAI ELR
Sbjct: 61   SSWWQNFFFNDDGNWLGLRDDDMAEAEAEAEGEGERTQELSEGDKFEAWKRRAEAIVELR 120

Query: 659  EAQEDVRNSENRKWEDWLVEGPLEEVGSSSWGQDWADGMDESSGDVRADPSEMVFGEGLV 838
            EAQED RN + RKWEDWL++G  +  G  +    W  GM +   +VRAD  ++   +G V
Sbjct: 121  EAQEDRRNQDYRKWEDWLLDGDGDGNGKDNTSS-WEQGMKDYRENVRADSGDVPVEKGFV 179

Query: 839  EEIRALVLGKEEGEFTYEERVFNYASSNSAKFLALLVIIPWTLDFVVHDYVLMPFLDRYV 1018
            E  R L+ G+E+ +  YE+RVF YASSNSAKFLA+L+I+PW +DF+VHDY+LMPFLDRYV
Sbjct: 180  ESARYLIFGREDDDMLYEDRVFQYASSNSAKFLAVLIIVPWAMDFLVHDYILMPFLDRYV 239

Query: 1019 KTVPLAAEFFDVRRSQKLEMVNTIKVERARFRFEAEIGKSPPLSDEEVWLELRHKALELR 1198
            KTVPLAA+  DVRR QKL+++  ++ ER RF  E EIGKSPPLSD+EVW ELRH+ALELR
Sbjct: 240  KTVPLAAQMLDVRRYQKLQIIEELRTERGRFELEVEIGKSPPLSDDEVWWELRHRALELR 299

Query: 1199 DEWRLENRRAFANILSDMVFGITVFILLYFNQTKVALLKFTGYKIINNVSDTGKAFLIIL 1378
            +EWRLENRRAFANI SD V+GI++FILLYFN++KVALLKFTGYKIINN+SDTGKAFLIIL
Sbjct: 300  EEWRLENRRAFANIWSDTVYGISLFILLYFNKSKVALLKFTGYKIINNISDTGKAFLIIL 359

Query: 1379 LTDIFLGYHSESGWQTLVELIVEHYGLEVDQAALTIFVCTVPVVMDACVKLWLFKYLPRL 1558
            +TDIFLGYHSESGWQTL+E+IVEHYGLEVDQ+A+TIF+C VPVV+DACVKLWLFK+LPRL
Sbjct: 360  ITDIFLGYHSESGWQTLLEIIVEHYGLEVDQSAITIFICLVPVVIDACVKLWLFKFLPRL 419

Query: 1559 SPRVTNIFREMTRH 1600
            SP VTNIF+EM RH
Sbjct: 420  SPSVTNIFQEMKRH 433


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