BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021837
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD05800.1| putative DNA-dependent RNA polymerase II [Oryza ...    55   4e-06
gb|EAZ41671.1| hypothetical protein OsJ_26208 [Oryza sativa Japo...    55   4e-06
gb|EAZ05752.1| hypothetical protein OsI_27986 [Oryza sativa Indi...    55   4e-06
ref|XP_003571431.1| PREDICTED: DNA-directed RNA polymerase D sub...    55   8e-06
ref|XP_002445131.1| hypothetical protein SORBIDRAFT_07g004600 [S...    54   1e-05

>dbj|BAD05800.1| putative DNA-dependent RNA polymerase II [Oryza sativa Japonica
           Group]
          Length = 1136

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 22/55 (40%), Positives = 38/55 (69%)
 Frame = -1

Query: 166 ILNVHFLGCTIPLWVFLFALGMPSDKDIIEMIDCNLSDESSVKLLLSTISYADDQ 2
           ++N++FLG TIP+W+  FALG+ SDK+  ++ID    D S   ++ +TI+ + +Q
Sbjct: 220 VINLYFLGATIPIWIMFFALGVSSDKEAFDIIDIQECDASMANIISATITESHEQ 274


>gb|EAZ41671.1| hypothetical protein OsJ_26208 [Oryza sativa Japonica Group]
          Length = 1257

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 22/55 (40%), Positives = 38/55 (69%)
 Frame = -1

Query: 166 ILNVHFLGCTIPLWVFLFALGMPSDKDIIEMIDCNLSDESSVKLLLSTISYADDQ 2
           ++N++FLG TIP+W+  FALG+ SDK+  ++ID    D S   ++ +TI+ + +Q
Sbjct: 341 VINLYFLGATIPIWIMFFALGVSSDKEAFDIIDIQECDASMANIISATITESHEQ 395


>gb|EAZ05752.1| hypothetical protein OsI_27986 [Oryza sativa Indica Group]
          Length = 1347

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 22/55 (40%), Positives = 38/55 (69%)
 Frame = -1

Query: 166 ILNVHFLGCTIPLWVFLFALGMPSDKDIIEMIDCNLSDESSVKLLLSTISYADDQ 2
           ++N++FLG TIP+W+  FALG+ SDK+  ++ID    D S   ++ +TI+ + +Q
Sbjct: 436 VINLYFLGATIPIWIMFFALGVSSDKEAFDIIDIQECDASMANIISATITESHEQ 490


>ref|XP_003571431.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like
           [Brachypodium distachyon]
          Length = 1242

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 23/55 (41%), Positives = 37/55 (67%)
 Frame = -1

Query: 166 ILNVHFLGCTIPLWVFLFALGMPSDKDIIEMIDCNLSDESSVKLLLSTISYADDQ 2
           ++ + FLG T+P+W+  FALG+ SDK+  +MID    D S V ++ +TI  +D+Q
Sbjct: 326 LVRLFFLGATMPIWIMFFALGVSSDKEAFDMIDIQDCDASLVNIISATIKESDEQ 380


>ref|XP_002445131.1| hypothetical protein SORBIDRAFT_07g004600 [Sorghum bicolor]
           gi|241941481|gb|EES14626.1| hypothetical protein
           SORBIDRAFT_07g004600 [Sorghum bicolor]
          Length = 1251

 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 23/57 (40%), Positives = 37/57 (64%)
 Frame = -1

Query: 172 CPILNVHFLGCTIPLWVFLFALGMPSDKDIIEMIDCNLSDESSVKLLLSTISYADDQ 2
           C ++ ++F+G  IP+WV  FALG+ SDK+  +MID    D S V ++ STI  + ++
Sbjct: 335 CKVITIYFMGTIIPIWVVFFALGVSSDKEAFDMIDILDCDASIVNIISSTIKESHEE 391