BLASTX nr result

ID: Coptis21_contig00021824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021824
         (1144 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19258.3| unnamed protein product [Vitis vinifera]              111   3e-22
ref|XP_002283873.1| PREDICTED: uncharacterized protein LOC100250...   111   3e-22
gb|ACU23430.1| unknown [Glycine max]                                  104   5e-20
ref|XP_003522747.1| PREDICTED: uncharacterized protein LOC100787...   103   6e-20
emb|CAN74018.1| hypothetical protein VITISV_003555 [Vitis vinifera]    99   2e-18

>emb|CBI19258.3| unnamed protein product [Vitis vinifera]
          Length = 378

 Score =  111 bits (278), Expect = 3e-22
 Identities = 63/134 (47%), Positives = 79/134 (58%), Gaps = 1/134 (0%)
 Frame = -1

Query: 850 MRSNRLENSKKHFSKVAVKDSRVVKSSEGST-SGDLVWIRLRGSLWWPAQVVDENMXXXX 674
           M+  RL +SK H  K   ++ +      G    GDL+W+RLRG  WWPAQVV+EN     
Sbjct: 1   MKGKRLASSKSHVVKE--EEEKAADQLRGKVLPGDLIWVRLRGLSWWPAQVVNENAVSRS 58

Query: 673 XXXXXXXPGGVLVRVYGTYTYLYMDLLKYRTEFKKILKQNDGSYLETFKKALEQDLSHRK 494
                     VLVRVYGTY YLY+D +K R+EF+ ILKQN+ SY E F+KALEQDL   K
Sbjct: 59  NKPGNRSEDEVLVRVYGTYNYLYVDPMKCRSEFENILKQNNCSYREIFQKALEQDLPSAK 118

Query: 493 RTTSKRTICESGEA 452
              SK    +S E+
Sbjct: 119 CGRSKGRGSKSKES 132


>ref|XP_002283873.1| PREDICTED: uncharacterized protein LOC100250519 [Vitis vinifera]
          Length = 553

 Score =  111 bits (278), Expect = 3e-22
 Identities = 63/134 (47%), Positives = 79/134 (58%), Gaps = 1/134 (0%)
 Frame = -1

Query: 850 MRSNRLENSKKHFSKVAVKDSRVVKSSEGST-SGDLVWIRLRGSLWWPAQVVDENMXXXX 674
           M+  RL +SK H  K   ++ +      G    GDL+W+RLRG  WWPAQVV+EN     
Sbjct: 1   MKGKRLASSKSHVVKE--EEEKAADQLRGKVLPGDLIWVRLRGLSWWPAQVVNENAVSRS 58

Query: 673 XXXXXXXPGGVLVRVYGTYTYLYMDLLKYRTEFKKILKQNDGSYLETFKKALEQDLSHRK 494
                     VLVRVYGTY YLY+D +K R+EF+ ILKQN+ SY E F+KALEQDL   K
Sbjct: 59  NKPGNRSEDEVLVRVYGTYNYLYVDPMKCRSEFENILKQNNCSYREIFQKALEQDLPSAK 118

Query: 493 RTTSKRTICESGEA 452
              SK    +S E+
Sbjct: 119 CGRSKGRGSKSKES 132


>gb|ACU23430.1| unknown [Glycine max]
          Length = 208

 Score =  104 bits (259), Expect = 5e-20
 Identities = 73/223 (32%), Positives = 104/223 (46%), Gaps = 3/223 (1%)
 Frame = -1

Query: 832 ENSKKHFSKVAVKDSRVVKSSEGSTSGDLVWIRLRGSLWWPAQVVDENMXXXXXXXXXXX 653
           ++ K   S+    DS  V        GD+++++LRGS WWP QVVDEN            
Sbjct: 6   KSGKSEISEGGANDSVAV--------GDVIFVKLRGSSWWPVQVVDENSVNKSVKPSKRT 57

Query: 652 P---GGVLVRVYGTYTYLYMDLLKYRTEFKKILKQNDGSYLETFKKALEQDLSHRKRTTS 482
               G +LVR YG+YTY Y D +K R EFK+IL++NDGS  +   + LEQDL     T S
Sbjct: 58  KRLPGDILVRHYGSYTYSYADPIKCRDEFKRILERNDGSLKKVLLQTLEQDL---PSTKS 114

Query: 481 KRTICESGEAVAATPTDEKSKHDTNKTNEQKFGSXXXXXXXXXXXXXXXXXXXXXXXXXX 302
           +R+   S +    +  D   K  +N  ++++                             
Sbjct: 115 RRSKGSSSKPKGTSSKDAAGKRKSNWEDKEQ-------------NKNKQKETLNVDDPAC 161

Query: 301 XXXVMPPLKVSSKLNVRRIRVMQSLGLVAPLGSTFHNSNSVLY 173
                  L  S +L+ RRIRVM++LGLVAP GS F   ++  Y
Sbjct: 162 QSWETSSLGKSPELSFRRIRVMENLGLVAPAGSPFEKKDAHKY 204


>ref|XP_003522747.1| PREDICTED: uncharacterized protein LOC100787568 [Glycine max]
          Length = 208

 Score =  103 bits (258), Expect = 6e-20
 Identities = 73/223 (32%), Positives = 104/223 (46%), Gaps = 3/223 (1%)
 Frame = -1

Query: 832 ENSKKHFSKVAVKDSRVVKSSEGSTSGDLVWIRLRGSLWWPAQVVDENMXXXXXXXXXXX 653
           ++ K   S+    DS  V        GD+++++LRGS WWP QVVDEN            
Sbjct: 6   KSGKSEISEGGANDSVAV--------GDVIFVKLRGSSWWPVQVVDENSVNKSVKPSKRT 57

Query: 652 P---GGVLVRVYGTYTYLYMDLLKYRTEFKKILKQNDGSYLETFKKALEQDLSHRKRTTS 482
               G +LVR YG+YTY Y D +K R EFK+IL++NDGS  +   + LEQDL     T S
Sbjct: 58  KRLPGDILVRHYGSYTYSYADPIKCRDEFKRILERNDGSLKKVLLQTLEQDL---PSTKS 114

Query: 481 KRTICESGEAVAATPTDEKSKHDTNKTNEQKFGSXXXXXXXXXXXXXXXXXXXXXXXXXX 302
           +R+   S +    +  D   K  +N  ++++                             
Sbjct: 115 RRSKGSSSKPKGTSSKDAAGKRKSNWEDKEQ-------------NKNKQKETLNVDDPAC 161

Query: 301 XXXVMPPLKVSSKLNVRRIRVMQSLGLVAPLGSTFHNSNSVLY 173
                  L  S +L+ RRIRVM++LGLVAP GS F   ++  Y
Sbjct: 162 QSWETSSLGKSPELSSRRIRVMENLGLVAPAGSPFEKKDAHKY 204


>emb|CAN74018.1| hypothetical protein VITISV_003555 [Vitis vinifera]
          Length = 398

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 61/143 (42%), Positives = 75/143 (52%), Gaps = 19/143 (13%)
 Frame = -1

Query: 850 MRSNRLENSKKHFSKVAVKDSRVVKSSEGST-SGDLVWIRLRGSLWWPAQVVDENMXXXX 674
           M+  RL +SK H  K   ++ +      G    GDL+W+RLRG  WWPAQVV+EN     
Sbjct: 1   MKGKRLASSKSHVVKE--EEEKAADQLRGKVLPGDLIWVRLRGLSWWPAQVVNENAVSRS 58

Query: 673 XXXXXXXPGGVLVRVYGTYTYLYMDLLKYRTEFK------------------KILKQNDG 548
                     VLVRVYGTY YLY+D  K R+EF+                  +ILKQN+ 
Sbjct: 59  NKPGNRSEDEVLVRVYGTYNYLYVDPXKCRSEFENLLRTYHLLVSKIISLKSQILKQNNC 118

Query: 547 SYLETFKKALEQDLSHRKRTTSK 479
           SY E F+KALEQDL   K   SK
Sbjct: 119 SYREIFQKALEQDLPSAKCGRSK 141


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