BLASTX nr result
ID: Coptis21_contig00021813
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00021813 (240 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002975496.1| hypothetical protein SELMODRAFT_103932 [Sela... 48 5e-06 ref|XP_002880100.1| hypothetical protein ARALYDRAFT_483548 [Arab... 48 6e-06 ref|XP_002867710.1| hypothetical protein ARALYDRAFT_492537 [Arab... 45 6e-06 ref|XP_002978737.1| hypothetical protein SELMODRAFT_109359 [Sela... 48 8e-06 >ref|XP_002975496.1| hypothetical protein SELMODRAFT_103932 [Selaginella moellendorffii] gi|300156497|gb|EFJ23125.1| hypothetical protein SELMODRAFT_103932 [Selaginella moellendorffii] Length = 414 Score = 48.1 bits (113), Expect(2) = 5e-06 Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = -3 Query: 190 TGKWWLSLHHIHIGYWPKSLLPQLDGGASIIAWGG-LAGGPPNDSHT 53 TG WWL IGYWP L L G A++I WGG + PN+ HT Sbjct: 299 TGNWWLRYGDELIGYWPPQLFTHLAGFANVIEWGGEVVNTRPNNRHT 345 Score = 26.9 bits (58), Expect(2) = 5e-06 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = -1 Query: 57 TPMGNGHYPHDDYKRACYI 1 T MG+GHYP Y A Y+ Sbjct: 347 TQMGSGHYPQSGYAVASYL 365 >ref|XP_002880100.1| hypothetical protein ARALYDRAFT_483548 [Arabidopsis lyrata subsp. lyrata] gi|297325939|gb|EFH56359.1| hypothetical protein ARALYDRAFT_483548 [Arabidopsis lyrata subsp. lyrata] Length = 410 Score = 47.8 bits (112), Expect(2) = 6e-06 Identities = 18/35 (51%), Positives = 22/35 (62%) Frame = -3 Query: 190 TGKWWLSLHHIHIGYWPKSLLPQLDGGASIIAWGG 86 TG WWL +GYWP L+P+L A +IAWGG Sbjct: 287 TGLWWLKFDTYQVGYWPSFLVPKLADSARMIAWGG 321 Score = 26.9 bits (58), Expect(2) = 6e-06 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = -1 Query: 57 TPMGNGHYPHDDYKRACYI 1 T MG+GH+ + +K+A YI Sbjct: 336 TQMGSGHFAEEGFKKAAYI 354 >ref|XP_002867710.1| hypothetical protein ARALYDRAFT_492537 [Arabidopsis lyrata subsp. lyrata] gi|297313546|gb|EFH43969.1| hypothetical protein ARALYDRAFT_492537 [Arabidopsis lyrata subsp. lyrata] Length = 400 Score = 45.1 bits (105), Expect(2) = 6e-06 Identities = 22/37 (59%), Positives = 25/37 (67%), Gaps = 2/37 (5%) Frame = -3 Query: 190 TGKWWLSLHHIHIGYWPKSLL-PQ-LDGGASIIAWGG 86 TG WW L++ IGYWPKSL PQ L GAS + WGG Sbjct: 278 TGDWWFVLNNEPIGYWPKSLFKPQGLADGASAVFWGG 314 Score = 29.6 bits (65), Expect(2) = 6e-06 Identities = 9/17 (52%), Positives = 14/17 (82%) Frame = -1 Query: 51 MGNGHYPHDDYKRACYI 1 MG+GH+P + YK+A Y+ Sbjct: 327 MGSGHFPQEGYKKAAYV 343 >ref|XP_002978737.1| hypothetical protein SELMODRAFT_109359 [Selaginella moellendorffii] gi|300153546|gb|EFJ20184.1| hypothetical protein SELMODRAFT_109359 [Selaginella moellendorffii] Length = 398 Score = 48.1 bits (113), Expect(2) = 8e-06 Identities = 22/47 (46%), Positives = 26/47 (55%), Gaps = 1/47 (2%) Frame = -3 Query: 190 TGKWWLSLHHIHIGYWPKSLLPQLDGGASIIAWGG-LAGGPPNDSHT 53 TG WWL IGYWP L L G A++I WGG + PN+ HT Sbjct: 283 TGNWWLRYGDELIGYWPPQLFTHLAGFANVIEWGGEVVNTRPNNRHT 329 Score = 26.2 bits (56), Expect(2) = 8e-06 Identities = 10/19 (52%), Positives = 12/19 (63%) Frame = -1 Query: 57 TPMGNGHYPHDDYKRACYI 1 T MG+GHYP Y A Y+ Sbjct: 331 TQMGSGHYPQAGYAVASYL 349