BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021793
         (1078 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598372.1| F-box/kelch-repeat protein [Medicago truncat...    97   5e-18
ref|XP_002312504.1| predicted protein [Populus trichocarpa] gi|2...    97   5e-18
ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|2...    92   2e-16
ref|NP_001169412.1| hypothetical protein [Zea mays] gi|224029193...    89   2e-15
ref|XP_002267358.1| PREDICTED: F-box protein CPR30 [Vitis vinifera]    88   4e-15

>ref|XP_003598372.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487420|gb|AES68623.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 385

 Score = 97.4 bits (241), Expect = 5e-18
 Identities = 95/346 (27%), Positives = 158/346 (45%), Gaps = 23/346 (6%)
 Frame = +2

Query: 5   DVLVEILIKLPAKSLAQFKCVCKRWCSLIRDPTFVYSHLAITTEKGMGIIQTRD-SEGFG 181
           DVL +IL  LP K L Q +C+CK + SLI DP FV  HL  +T++   ++ T D  + F 
Sbjct: 40  DVLTDILCMLPVKLLVQLRCLCKFFNSLISDPKFVKKHLQSSTKRRHLMLTTIDHQQQFV 99

Query: 182 FYSI---DQYGIAKKVHQTILYPR--------VLSCNGL-LCLQERTYYFIRFRNPVTKE 325
            Y       +  +  V QT LYP           SC+G+ L +   T YF+   NP  ++
Sbjct: 100 MYDSPIPSLFSTSTIVAQTQLYPPNGDTYASVKCSCDGIFLGMFSHTSYFL--WNPSIRK 157

Query: 326 TITIPRPFNSQMSGAF-----FETALGFDTCLRKYKVVCFNPHHPQSSSEIMLYTLGIGS 490
              +P   N   S  F     +  + G+D  + KYKV+  +     S +E+ LYTL  G+
Sbjct: 158 FKLLPPLENQDKSAPFTIIVPYTISFGYDCFIDKYKVIAVS-----SKNEVFLYTL--GT 210

Query: 491 TTWKKIKCPIGFTIDIFREAIYANGNLHWPIGFTIDIFREAMYANGNLHWPFSVIDHHVN 670
             WK+I   I +   I R  +Y +G ++W   +  D    ++Y                 
Sbjct: 211 DYWKRID-DIPYYCTICRSGLYVSGAVNW---YVHDESDSSLY----------------- 249

Query: 671 GLIRQPLVMALNLASEECRMIAGPDVTLTRYNYWLRELGGYLTLGHTPLNERNTVTMWVL 850
                  +++L+L +E  + +  PD     Y++ L  L  YL +  T       + +W++
Sbjct: 250 ------FILSLDLENESYQELYPPDFEDESYSWTLGVLSDYLCVFAT---SDMFLNVWIM 300

Query: 851 KDY-DKQGWVKHCTFQVP----YGPCSGSSVLPIRNDIMLFQSKEY 973
           K+Y +++ W K C+  VP    +G  + ++V    +D +L Q  E+
Sbjct: 301 KEYGNQESWTKLCS--VPDMHDHGFQASAAVYISEDDQLLLQCYEF 344


>ref|XP_002312504.1| predicted protein [Populus trichocarpa] gi|222852324|gb|EEE89871.1|
           predicted protein [Populus trichocarpa]
          Length = 433

 Score = 97.4 bits (241), Expect = 5e-18
 Identities = 89/331 (26%), Positives = 152/331 (45%), Gaps = 38/331 (11%)
 Frame = +2

Query: 2   DDVLVEILIKLPAKSLAQFKCVCKRWCSLIRDPTFVYSHLA--ITTEKGMGII-----QT 160
           DDV+++IL +LPAKS+ +F+CV + WCS   DP F   H A  +T + G  ++      +
Sbjct: 28  DDVILDILTRLPAKSVVRFRCVSRTWCSFTHDPFFASLHHARSLTRDNGSALLLSYPDPS 87

Query: 161 RDSEGFGFYSIDQ-YGIAKKVHQTILYPRVLSC-NGLLCLQERTYYFIRFRNPVTKETIT 334
             S  F F+   Q +   +  H    Y  +     G+LC+  R  + +   N  T+ETIT
Sbjct: 88  SSSTSFSFFERKQGFRNLQISHVDQQYTHLSEIIRGILCINYRRSHRVDICNITTQETIT 147

Query: 335 IPRPFNSQM---SGAFFET------ALGFDTCLRKYKV--VC--------FNPHHPQSSS 457
           +PR  N  +   +G  F+       + GF++  R YKV  +C         NP++  S+ 
Sbjct: 148 LPRSTNIPIRSDAGVDFDIVYEPRYSFGFNSSTRDYKVLNICSITRYKLQVNPNNGLSTR 207

Query: 458 EIM-------LYTLGI--GSTTWKKIKCPIGFTIDIFREAIYANGNLHWPIGFTIDIFRE 610
           E+        ++T+G   G+ +W+KI    G+  D           LH        +  E
Sbjct: 208 EVSQRTVEFEIFTIGCDRGAGSWRKIDP--GYPYD---------QELH-------GLSCE 249

Query: 611 AMYANGNLHWPFSVIDHHVNGLIRQPLVMALNLASEECRMIAGPDVTLTRYNYWLRELGG 790
           ++ A+G +HW     D        Q +++A +L  E+ ++I  P   L  ++   +  G 
Sbjct: 250 SVCADGVIHWRHRFFD--------QEILLAFDLKQEKFQIIQVPKEAL-EFHLMKQVKGC 300

Query: 791 YLTLGHTPLN-ERNTVTMWVLKDYDKQGWVK 880
            + +GH      RN + +W+L+D   Q W+K
Sbjct: 301 LVLMGHVISGYNRNKIVLWILEDRLNQIWMK 331


>ref|XP_002300154.1| predicted protein [Populus trichocarpa] gi|222847412|gb|EEE84959.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score = 92.4 bits (228), Expect = 2e-16
 Identities = 67/209 (32%), Positives = 100/209 (47%), Gaps = 18/209 (8%)
 Frame = +2

Query: 5   DVLVEILIKLPAKSLAQFKCVCKRWCSLIRDPTFVYSHLAITTEKGMG-----IIQTRDS 169
           D++V+IL  LP KSL +FKCVCK W SLI DP FV SHL    E         ++ TR  
Sbjct: 7   DIMVDILTYLPVKSLLRFKCVCKLWHSLISDPKFVKSHLKTAREVNSNKSQRLLLSTRTP 66

Query: 170 EGFGFYSIDQYGIAKKVHQTILYPRVL------------SCNGLLCLQERTYYFIRFRNP 313
           +   F +  + G      Q + YP V+            SC+GL+CL    Y  +   NP
Sbjct: 67  QSVDFEAASE-GDEDNAVQELEYPDVVRCSPTYFIGIMGSCDGLICLFV-DYAKLVLWNP 124

Query: 314 VTKETITIPRPFNSQMSGAFFETALGFDTCLRKYKVVCFNPHHPQSSSEIMLYTLGIGST 493
            T++   +P+P  S   G  F   +G+D+    YK V  +      S +IM+  L + + 
Sbjct: 125 STRDYKEMPKP--SCDHGFDFFAGIGYDSSNDDYKFVIPSCTTADGSEQIMVEVLTLKTN 182

Query: 494 TWKKI-KCPIGFTIDIFREAIYANGNLHW 577
            W+K+ +   G T+      ++ NG +HW
Sbjct: 183 VWRKVPEICQGTTLVGAYRGLFCNGAVHW 211


>ref|NP_001169412.1| hypothetical protein [Zea mays] gi|224029193|gb|ACN33672.1| unknown
           [Zea mays] gi|414885214|tpg|DAA61228.1| TPA:
           hypothetical protein ZEAMMB73_142511 [Zea mays]
           gi|414885215|tpg|DAA61229.1| TPA: hypothetical protein
           ZEAMMB73_142511 [Zea mays] gi|414885216|tpg|DAA61230.1|
           TPA: hypothetical protein ZEAMMB73_142511 [Zea mays]
          Length = 370

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 81/314 (25%), Positives = 132/314 (42%), Gaps = 13/314 (4%)
 Frame = +2

Query: 2   DDVLVEILIKLPAKSLAQFKCVCKRWCSLIRDPTFVYSHLAITTEKGMGIIQTRDSEG-- 175
           DD L E+  +LPA++LA  + VCK W S++ DP F++ HL+   +K +     R ++   
Sbjct: 18  DDALTEVFRRLPARALAACRLVCKSWMSVLTDPHFIHEHLSRGQQKLLLFATDRGNDRSL 77

Query: 176 ---FGFYSIDQYGIAKKVHQTILYPRVLSCNGLLCLQERTYYFIRFRNPVTKETITIPRP 346
                  +   Y +++      ++    SCNGLLCL + T   +   NP T E++ +P P
Sbjct: 78  AMVLADNNASMYQLSRPAASRSVFVH-NSCNGLLCLGDST-GAVEVLNPTTGESLMLPMP 135

Query: 347 FNSQMSGAFFET---ALGFDTCLRKYKVVCFNP--HHPQSSSEIMLYTLGIGSTTWKKIK 511
             +  S  F       LGF    R++KVV F P  H+        +YT+G+G   W+++ 
Sbjct: 136 MYTAGSSQFSSCNWHCLGFCPQKREHKVVHFYPGAHNDPFKVHCEIYTIGVG--VWRQVG 193

Query: 512 CPIGFTIDIFREAIYANGNLHWPIGFTIDIFREAMYANGNLHWPFSVIDHHVNGLIRQPL 691
              G   D     ++ NG +++   F                             I    
Sbjct: 194 SCHGAPTD---RGVHVNGMVYYLTKFR---------------------------YIASSR 223

Query: 692 VMALNLASEECRMIAGPDVTLTRYNYWLRELGGYLTL---GHTPLNERNTVTMWVLKDYD 862
           +  LNL SE+  ++  P       +  L EL G L L            T+ + +L  +D
Sbjct: 224 INCLNLESEKFDVMMLPPHKSYGGHCSLAELEGKLCLLIVDGALEGPPRTMDILMLNSHD 283

Query: 863 KQGWVKHCTFQVPY 904
           KQGW     F +P+
Sbjct: 284 KQGWTHRYHFSLPW 297


>ref|XP_002267358.1| PREDICTED: F-box protein CPR30 [Vitis vinifera]
          Length = 408

 Score = 87.8 bits (216), Expect = 4e-15
 Identities = 74/317 (23%), Positives = 138/317 (43%), Gaps = 15/317 (4%)
 Frame = +2

Query: 2   DDVLVEILIKLPAKSLAQFKCVCKRWCSLIRDPTFVYSHLA------ITTEKGMGIIQTR 163
           ++++ EIL++LP KSL +F+CVCK WC+LI  P F  +HL       IT       + ++
Sbjct: 6   EEIIEEILLRLPVKSLLRFRCVCKAWCTLISQPQFTKAHLCRQRTHPITQILVPPSVDSQ 65

Query: 164 DSEGFGFYSIDQYGIAKKVHQTILYPRVLSCNGLLCLQERTYYF--------IRFRNPVT 319
            ++GF        G++     T +     SC+GLLCL +  Y F        +   NP T
Sbjct: 66  PNDGFSVDLDFPLGLSSSKGSTAILD---SCHGLLCLVDGFYGFHIHQPPHELVLWNPST 122

Query: 320 KETITIPRPFNSQMSGAFFETALGFDTCLRKYKVVCFNPHHPQSSSEIMLYTLGIGSTTW 499
           +++  +P P     S   +    G+D+    YK+V        ++         + +  W
Sbjct: 123 RQSNHLPFPSFVNYSSCLY--GFGYDSYSDDYKIV--RVFSLSATHRTGFDVFSLKTNNW 178

Query: 500 KKIKCPIGFTIDIFREAIYANGNLHWPIGFTIDIFREAMYANGNLHWPFSVIDHHVNGLI 679
           ++++      I+ +  A +  G++HW                         +    NG  
Sbjct: 179 RRVQATHSSVIE-YELATFFKGSVHW-------------------------LARRPNGAG 212

Query: 680 RQPLVMALNLASEECRMIAGPDVTLTRYNYWLRELGGYLTLGHTPLNERNTVTMWVLKDY 859
           ++ +++A +   E+ + +  P  ++    + LR LG  L +      + ++  MWV+++Y
Sbjct: 213 KRCVIVAFSFREEKVQEMELPSKSVF---FGLRVLGECLCVAGLCSYDLDSDEMWVMEEY 269

Query: 860 -DKQGWVKHCTFQVPYG 907
             K+ W +  TF  PYG
Sbjct: 270 GKKESWKRLITF--PYG 284