BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021792
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245...   120   1e-25
emb|CBI34885.3| unnamed protein product [Vitis vinifera]              120   1e-25
emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]   120   1e-25
ref|XP_002524665.1| pentatricopeptide repeat-containing protein,...   109   3e-22
gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea m...    84   2e-14

>ref|XP_002273685.2| PREDICTED: uncharacterized protein LOC100245824 [Vitis vinifera]
          Length = 1984

 Score =  120 bits (300), Expect = 1e-25
 Identities = 55/94 (58%), Positives = 75/94 (79%)
 Frame = +3

Query: 3   KVEESVLYFEKNPFRDVVSWTAMINGFVKNGLNFDGLMVFRKMLNCGISPNAVTFSSVIK 182
           +VEES+ YFE+NPF++VVSWTA I+GFV+NGLNF+ L +F ++L  G+ PN VTF+SV++
Sbjct: 133 RVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVR 192

Query: 183 ACIGLSDFDCGRSLLSLIVRYGFEHNVSVCNSII 284
           AC  L DF  G S+L L+V+ GFEH +SV NS+I
Sbjct: 193 ACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLI 226



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/89 (33%), Positives = 52/89 (58%)
 Frame = +3

Query: 3   KVEESVLYFEKNPFRDVVSWTAMINGFVKNGLNFDGLMVFRKMLNCGISPNAVTFSSVIK 182
           ++EE+   FE  P ++ VSW  +I G+++N      L VF  +L  G +PN  TFSSV+ 
Sbjct: 397 RLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLC 456

Query: 183 ACIGLSDFDCGRSLLSLIVRYGFEHNVSV 269
           AC  ++  D G ++   I++ G ++++ V
Sbjct: 457 ACASIASLDKGMNVHGKIIKLGIQYDIFV 485


>emb|CBI34885.3| unnamed protein product [Vitis vinifera]
          Length = 728

 Score =  120 bits (300), Expect = 1e-25
 Identities = 55/94 (58%), Positives = 75/94 (79%)
 Frame = +3

Query: 3   KVEESVLYFEKNPFRDVVSWTAMINGFVKNGLNFDGLMVFRKMLNCGISPNAVTFSSVIK 182
           +VEES+ YFE+NPF++VVSWTA I+GFV+NGLNF+ L +F ++L  G+ PN VTF+SV++
Sbjct: 133 RVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVR 192

Query: 183 ACIGLSDFDCGRSLLSLIVRYGFEHNVSVCNSII 284
           AC  L DF  G S+L L+V+ GFEH +SV NS+I
Sbjct: 193 ACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLI 226



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/89 (33%), Positives = 52/89 (58%)
 Frame = +3

Query: 3   KVEESVLYFEKNPFRDVVSWTAMINGFVKNGLNFDGLMVFRKMLNCGISPNAVTFSSVIK 182
           ++EE+   FE  P ++ VSW  +I G+++N      L VF  +L  G +PN  TFSSV+ 
Sbjct: 397 RLEETEELFELIPEKNDVSWGTIIAGYLENEQCEKVLEVFNTLLVSGQTPNKSTFSSVLC 456

Query: 183 ACIGLSDFDCGRSLLSLIVRYGFEHNVSV 269
           AC  ++  D G ++   I++ G ++++ V
Sbjct: 457 ACASIASLDKGMNVHGKIIKLGIQYDIFV 485


>emb|CAN83551.1| hypothetical protein VITISV_001173 [Vitis vinifera]
          Length = 728

 Score =  120 bits (300), Expect = 1e-25
 Identities = 55/94 (58%), Positives = 75/94 (79%)
 Frame = +3

Query: 3   KVEESVLYFEKNPFRDVVSWTAMINGFVKNGLNFDGLMVFRKMLNCGISPNAVTFSSVIK 182
           +VEES+ YFE+NPF++VVSWTA I+GFV+NGLNF+ L +F ++L  G+ PN VTF+SV++
Sbjct: 133 RVEESMWYFERNPFQNVVSWTAAISGFVRNGLNFEALKLFFRLLESGVRPNDVTFTSVVR 192

Query: 183 ACIGLSDFDCGRSLLSLIVRYGFEHNVSVCNSII 284
           AC  L DF  G S+L L+V+ GFEH +SV NS+I
Sbjct: 193 ACGELGDFGLGMSILGLVVKAGFEHYLSVSNSLI 226


>ref|XP_002524665.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536026|gb|EEF37684.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 2000

 Score =  109 bits (272), Expect = 3e-22
 Identities = 48/94 (51%), Positives = 72/94 (76%)
 Frame = +3

Query: 3   KVEESVLYFEKNPFRDVVSWTAMINGFVKNGLNFDGLMVFRKMLNCGISPNAVTFSSVIK 182
           +V ES+ YFE+NPF++VVSWTA I+G+V+NG + + + +F K+L   + PN VTF+SV++
Sbjct: 133 RVRESMWYFERNPFQNVVSWTAAISGYVQNGFSVEAMKLFIKLLESEVKPNKVTFTSVVR 192

Query: 183 ACIGLSDFDCGRSLLSLIVRYGFEHNVSVCNSII 284
           AC  L DF  G S+L LIV+ G+EH+++V NS+I
Sbjct: 193 ACANLGDFGLGMSVLGLIVKTGYEHDLAVSNSLI 226



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 28/86 (32%), Positives = 49/86 (56%)
 Frame = +3

Query: 27  FEKNPFRDVVSWTAMINGFVKNGLNFDGLMVFRKMLNCGISPNAVTFSSVIKACIGLSDF 206
           F++ P R+ VSW+AMI  + ++G   + L +F +M+  G  PN   FSS++ A   +   
Sbjct: 273 FDEMPQRNEVSWSAMIARYCQSGYPEESLRLFCRMIQEGFKPNISCFSSILSALASVEAL 332

Query: 207 DCGRSLLSLIVRYGFEHNVSVCNSII 284
             G ++   + + GFE +V V +S+I
Sbjct: 333 QAGMNIHGHVTKIGFEKDVFVSSSLI 358


>gb|AFW67903.1| pentatricopeptide repeat protein PPR868-14 [Zea mays]
          Length = 788

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
 Frame = +3

Query: 6   VEESVLYFEKNPFRDVVSWTAMINGFVKNGLNFDGLMVFRKMLNCGISPNAVTFSSVIKA 185
           V ++V  +E+ P   V  +TAMI+GFV+N L+ D   VFRKML C + PN VT   VIKA
Sbjct: 196 VRDAVELYERCPLHSVAFFTAMISGFVRNELHKDAFTVFRKMLTCSVRPNVVTLICVIKA 255

Query: 186 CIGLSDFDCGRSLLSLIVRYG-FEHNVSVCNSII 284
           C+G  +FD    ++ L V+   FE ++ V NS+I
Sbjct: 256 CVGAGEFDLAMGVVGLAVKCNLFEKSIEVHNSLI 289



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/87 (39%), Positives = 47/87 (54%)
 Frame = +3

Query: 3   KVEESVLYFEKNPFRDVVSWTAMINGFVKNGLNFDGLMVFRKMLNCGISPNAVTFSSVIK 182
           K+ E+   F K P R+ VSW  MI+G+ +N    D L  F  ML  G  P  +T SSV+ 
Sbjct: 460 KMVEAEGLFNKMPARNSVSWNTMISGYAENRRFGDALNYFYAMLASGHIPGEITLSSVLL 519

Query: 183 ACIGLSDFDCGRSLLSLIVRYGFEHNV 263
           AC  L   + GR + + IV+ G E N+
Sbjct: 520 ACANLCSLEMGRMVHAEIVKLGIEDNI 546