BLASTX nr result

ID: Coptis21_contig00021789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021789
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272832.2| PREDICTED: ent-copalyl diphosphate synthase,...   283   1e-74
emb|CBL42915.1| copalyldiphosphate synthase [Helianthus annuus] ...   283   1e-74
emb|CBI28693.3| unnamed protein product [Vitis vinifera]              283   1e-74
ref|XP_002302110.1| copalyl diphosphate synthase [Populus tricho...   283   1e-74
emb|CAN73324.1| hypothetical protein VITISV_001829 [Vitis vinifera]   283   1e-74

>ref|XP_002272832.2| PREDICTED: ent-copalyl diphosphate synthase, chloroplastic-like
           [Vitis vinifera]
          Length = 757

 Score =  283 bits (725), Expect = 1e-74
 Identities = 137/211 (64%), Positives = 168/211 (79%), Gaps = 1/211 (0%)
 Frame = +3

Query: 6   VEVIRARLQSLDDGELSISAYDTAWVALVKDINGNDAPQFPSSLEWIVNNQFPDGSWGD- 182
           V+ +R+ L S++DGE+S SAYDTAWVALVKDING D PQFPSSL WI NNQ  DGSWGD 
Sbjct: 46  VDTVRSMLSSMEDGEISKSAYDTAWVALVKDINGTDTPQFPSSLLWIANNQLEDGSWGDV 105

Query: 183 SFFSAYDRLRCTLACVLALKTWNCDQEKWEKGMSFLGQYLHKLNDEDPEHQPSGFEVAFP 362
            FFS YDR+  TLACV+ALK+WN   EK+EKGMSF+ + + KL  E  EH P GFEVAFP
Sbjct: 106 HFFSPYDRILNTLACVIALKSWNIHPEKFEKGMSFIRENICKLEKEKAEHMPIGFEVAFP 165

Query: 363 TLIEMAQKLGLEVLQDPTVLQDLYAKRELKLKRIPMEVLHNVPTTLLHSLEGIPDLDWEK 542
           +L+E+A+ +G+EV  D  VLQ++YA+R+LKLK+IP +++H VPTTLL SLEG+P LDWE 
Sbjct: 166 SLLEIAEDMGIEVPDDSPVLQEIYAQRDLKLKKIPKDIMHRVPTTLLFSLEGMPGLDWEM 225

Query: 543 LVKLQHPNGSFLCSTSSTAYALMQTKDKKCL 635
           L+ LQ  +GSFL S SSTAYALM TKD+KCL
Sbjct: 226 LLNLQFQDGSFLFSPSSTAYALMHTKDEKCL 256


>emb|CBL42915.1| copalyldiphosphate synthase [Helianthus annuus]
           gi|298357284|emb|CBM82407.1| copalyldiphosphate synthase
           [Helianthus annuus]
          Length = 798

 Score =  283 bits (725), Expect = 1e-74
 Identities = 136/211 (64%), Positives = 171/211 (81%), Gaps = 1/211 (0%)
 Frame = +3

Query: 6   VEVIRARLQSLDDGELSISAYDTAWVALVKDINGNDAPQFPSSLEWIVNNQFPDGSWGDS 185
           +E I+A L S++DGE+S+SAYDTAWVALVKD+NG  +PQFPSSLEWI NNQ PDGSWGDS
Sbjct: 93  IETIKAMLGSMNDGEISVSAYDTAWVALVKDVNGGGSPQFPSSLEWIANNQLPDGSWGDS 152

Query: 186 -FFSAYDRLRCTLACVLALKTWNCDQEKWEKGMSFLGQYLHKLNDEDPEHQPSGFEVAFP 362
             F A+DR+  TLACV+AL +WN    K EKG+ FL + + KL DE+ EH P GFEVA P
Sbjct: 153 VLFLAHDRIINTLACVIALTSWNVHPSKCEKGVKFLKENICKLEDENEEHMPIGFEVALP 212

Query: 363 TLIEMAQKLGLEVLQDPTVLQDLYAKRELKLKRIPMEVLHNVPTTLLHSLEGIPDLDWEK 542
           +L+++A+KL +EV +D   L+++YA+R LKL +IPMEV+H VPTTLLHSLEG+PDL+WEK
Sbjct: 213 SLLDIARKLKIEVPEDTPALKEIYAQRNLKLTKIPMEVVHKVPTTLLHSLEGMPDLEWEK 272

Query: 543 LVKLQHPNGSFLCSTSSTAYALMQTKDKKCL 635
           L+KLQ  +GSFL S SSTA+ALM TKD+KCL
Sbjct: 273 LLKLQSKDGSFLFSPSSTAFALMNTKDEKCL 303


>emb|CBI28693.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  283 bits (725), Expect = 1e-74
 Identities = 137/211 (64%), Positives = 168/211 (79%), Gaps = 1/211 (0%)
 Frame = +3

Query: 6   VEVIRARLQSLDDGELSISAYDTAWVALVKDINGNDAPQFPSSLEWIVNNQFPDGSWGD- 182
           V+ +R+ L S++DGE+S SAYDTAWVALVKDING D PQFPSSL WI NNQ  DGSWGD 
Sbjct: 69  VDTVRSMLSSMEDGEISKSAYDTAWVALVKDINGTDTPQFPSSLLWIANNQLEDGSWGDV 128

Query: 183 SFFSAYDRLRCTLACVLALKTWNCDQEKWEKGMSFLGQYLHKLNDEDPEHQPSGFEVAFP 362
            FFS YDR+  TLACV+ALK+WN   EK+EKGMSF+ + + KL  E  EH P GFEVAFP
Sbjct: 129 HFFSPYDRILNTLACVIALKSWNIHPEKFEKGMSFIRENICKLEKEKAEHMPIGFEVAFP 188

Query: 363 TLIEMAQKLGLEVLQDPTVLQDLYAKRELKLKRIPMEVLHNVPTTLLHSLEGIPDLDWEK 542
           +L+E+A+ +G+EV  D  VLQ++YA+R+LKLK+IP +++H VPTTLL SLEG+P LDWE 
Sbjct: 189 SLLEIAEDMGIEVPDDSPVLQEIYAQRDLKLKKIPKDIMHRVPTTLLFSLEGMPGLDWEM 248

Query: 543 LVKLQHPNGSFLCSTSSTAYALMQTKDKKCL 635
           L+ LQ  +GSFL S SSTAYALM TKD+KCL
Sbjct: 249 LLNLQFQDGSFLFSPSSTAYALMHTKDEKCL 279


>ref|XP_002302110.1| copalyl diphosphate synthase [Populus trichocarpa]
           gi|222843836|gb|EEE81383.1| copalyl diphosphate synthase
           [Populus trichocarpa]
          Length = 795

 Score =  283 bits (725), Expect = 1e-74
 Identities = 138/211 (65%), Positives = 170/211 (80%), Gaps = 1/211 (0%)
 Frame = +3

Query: 6   VEVIRARLQSLDDGELSISAYDTAWVALVKDINGNDAPQFPSSLEWIVNNQFPDGSWGDS 185
           V+ I+A L+ ++DGE+SISAYDTAWVALV+DING+  PQFPSSL+WI NNQ PDGSWGD+
Sbjct: 78  VKTIKAMLEMMEDGEISISAYDTAWVALVEDINGSGLPQFPSSLQWIANNQLPDGSWGDA 137

Query: 186 -FFSAYDRLRCTLACVLALKTWNCDQEKWEKGMSFLGQYLHKLNDEDPEHQPSGFEVAFP 362
             F A+DRL  TLACV+ALK+WN  QEK EKGM F    L KL DE+ EH P GFEVAFP
Sbjct: 138 EIFLAHDRLINTLACVVALKSWNLHQEKCEKGMLFFRDNLCKLEDENAEHMPIGFEVAFP 197

Query: 363 TLIEMAQKLGLEVLQDPTVLQDLYAKRELKLKRIPMEVLHNVPTTLLHSLEGIPDLDWEK 542
           +L+E+A+KL +EV  D  VLQ++YA R LKL RIP +++HNVPTTLLHSLEG+P L+W++
Sbjct: 198 SLLEIAKKLDIEVPYDSPVLQEIYASRNLKLTRIPKDIMHNVPTTLLHSLEGMPGLEWKR 257

Query: 543 LVKLQHPNGSFLCSTSSTAYALMQTKDKKCL 635
           L+KLQ  +GSFL S SSTA+AL QTKDK C+
Sbjct: 258 LLKLQSQDGSFLFSPSSTAFALSQTKDKNCM 288


>emb|CAN73324.1| hypothetical protein VITISV_001829 [Vitis vinifera]
          Length = 828

 Score =  283 bits (725), Expect = 1e-74
 Identities = 137/211 (64%), Positives = 168/211 (79%), Gaps = 1/211 (0%)
 Frame = +3

Query: 6   VEVIRARLQSLDDGELSISAYDTAWVALVKDINGNDAPQFPSSLEWIVNNQFPDGSWGD- 182
           V+ +R+ L S++DGE+S SAYDTAWVALVKDING D PQFPSSL WI NNQ  DGSWGD 
Sbjct: 104 VDTVRSMLSSMEDGEISKSAYDTAWVALVKDINGTDTPQFPSSLLWIANNQLEDGSWGDV 163

Query: 183 SFFSAYDRLRCTLACVLALKTWNCDQEKWEKGMSFLGQYLHKLNDEDPEHQPSGFEVAFP 362
            FFS YDR+  TLACV+ALK+WN   EK+EKGMSF+ + + KL  E  EH P GFEVAFP
Sbjct: 164 HFFSPYDRILNTLACVIALKSWNIHPEKFEKGMSFIRENICKLEKEKAEHMPIGFEVAFP 223

Query: 363 TLIEMAQKLGLEVLQDPTVLQDLYAKRELKLKRIPMEVLHNVPTTLLHSLEGIPDLDWEK 542
           +L+E+A+ +G+EV  D  VLQ++YA+R+LKLK+IP +++H VPTTLL SLEG+P LDWE 
Sbjct: 224 SLLEIAEDMGIEVPDDSPVLQEIYAQRDLKLKKIPKDIMHRVPTTLLFSLEGMPGLDWEM 283

Query: 543 LVKLQHPNGSFLCSTSSTAYALMQTKDKKCL 635
           L+ LQ  +GSFL S SSTAYALM TKD+KCL
Sbjct: 284 LLNLQFQDGSFLFSPSSTAYALMHTKDEKCL 314


Top