BLASTX nr result

ID: Coptis21_contig00021780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021780
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633767.1| PREDICTED: fidgetin-like protein 1-like [Vit...    99   4e-19
emb|CBI21358.3| unnamed protein product [Vitis vinifera]               99   4e-19
emb|CAN60755.1| hypothetical protein VITISV_041985 [Vitis vinifera]    99   4e-19
ref|XP_002298622.1| predicted protein [Populus trichocarpa] gi|2...    94   9e-18
ref|XP_003524613.1| PREDICTED: fidgetin-like protein 1-like [Gly...    92   4e-17

>ref|XP_003633767.1| PREDICTED: fidgetin-like protein 1-like [Vitis vinifera]
          Length = 668

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/54 (87%), Positives = 52/54 (96%)
 Frame = -2

Query: 392 LRQGIEITSLKKEDMRTVTLQDFESALQEVRPSVSLNELGTYEEWNKQFGSIAV 231
           LRQGIEIT LKKEDMR VTLQDFESALQEVRPSVSLNELGTY++WNKQFGS+++
Sbjct: 615 LRQGIEITKLKKEDMRPVTLQDFESALQEVRPSVSLNELGTYDDWNKQFGSLSL 668


>emb|CBI21358.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/54 (87%), Positives = 52/54 (96%)
 Frame = -2

Query: 392 LRQGIEITSLKKEDMRTVTLQDFESALQEVRPSVSLNELGTYEEWNKQFGSIAV 231
           LRQGIEIT LKKEDMR VTLQDFESALQEVRPSVSLNELGTY++WNKQFGS+++
Sbjct: 600 LRQGIEITKLKKEDMRPVTLQDFESALQEVRPSVSLNELGTYDDWNKQFGSLSL 653


>emb|CAN60755.1| hypothetical protein VITISV_041985 [Vitis vinifera]
          Length = 287

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 47/54 (87%), Positives = 52/54 (96%)
 Frame = -2

Query: 392 LRQGIEITSLKKEDMRTVTLQDFESALQEVRPSVSLNELGTYEEWNKQFGSIAV 231
           LRQGIEIT LKKEDMR VTLQDFESALQEVRPSVSLNELGTY++WNKQFGS+++
Sbjct: 234 LRQGIEITKLKKEDMRPVTLQDFESALQEVRPSVSLNELGTYDDWNKQFGSLSL 287


>ref|XP_002298622.1| predicted protein [Populus trichocarpa] gi|222845880|gb|EEE83427.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 45/51 (88%), Positives = 48/51 (94%)
 Frame = -2

Query: 392 LRQGIEITSLKKEDMRTVTLQDFESALQEVRPSVSLNELGTYEEWNKQFGS 240
           L+QGIEIT LKKEDMR+VTLQDFE ALQEVRPSVS NELGTY+EWNKQFGS
Sbjct: 245 LKQGIEITKLKKEDMRSVTLQDFEDALQEVRPSVSSNELGTYDEWNKQFGS 295


>ref|XP_003524613.1| PREDICTED: fidgetin-like protein 1-like [Glycine max]
          Length = 659

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/54 (79%), Positives = 50/54 (92%)
 Frame = -2

Query: 392 LRQGIEITSLKKEDMRTVTLQDFESALQEVRPSVSLNELGTYEEWNKQFGSIAV 231
           L QGIEIT LKKEDMR VTLQDF+++LQEVRPSVS NELGTYE+WNKQFGS+++
Sbjct: 606 LSQGIEITKLKKEDMRPVTLQDFKNSLQEVRPSVSTNELGTYEQWNKQFGSLSL 659


Top