BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021771
         (728 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300142.1| f-box family protein [Populus trichocarpa] g...    99   1e-18
ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein...    94   2e-17
emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]    94   2e-17
ref|XP_002516561.1| ubiquitin-protein ligase, putative [Ricinus ...    91   3e-16
gb|AAG13047.1|AC011807_6 Hypothetical protein [Arabidopsis thali...    84   4e-14

>ref|XP_002300142.1| f-box family protein [Populus trichocarpa]
           gi|222847400|gb|EEE84947.1| f-box family protein
           [Populus trichocarpa]
          Length = 481

 Score = 98.6 bits (244), Expect = 1e-18
 Identities = 68/183 (37%), Positives = 89/183 (48%), Gaps = 2/183 (1%)
 Frame = +1

Query: 157 NRISNLPDDILFHVLSLLEMKDVVKTGVLSRRWGHLWTNVRTLDFCGPSSCEEEAREKFV 336
           +RISNLPD I+ H+LS L   D +KT +LS+RW  +WT V  L F    SC +EA E F 
Sbjct: 45  DRISNLPDPIIQHILSFLPADDAIKTCILSKRWDSIWTLVPNLIFRRECSCSQEA-ENFA 103

Query: 337 SFVDYTLLFNESKTIKTFHLLLELTEAFPEDISEEEAKRVKELCLHIDRWVRLAVRKKVE 516
            FVD  L+   S  +K F +  E TE F                  +D WV  AVR KVE
Sbjct: 104 VFVDKALMHYCSPKVKKFLVEFEFTECFK---------------AQVDSWVDFAVRLKVE 148

Query: 517 IVYLDFFTVNTRWRGCLLSLYPYNLPCSLYINNTIKSLLLASCSIDPT--RQLQWKYLKI 690
            + L+F       R        Y LP  LY N   + L L  C++ P   +Q+ W  LK+
Sbjct: 149 ELCLEFH------REIADDPDYYYLPNFLYSNIPAEKLSLRFCALSPNKLKQVSWMSLKV 202

Query: 691 LRL 699
           L +
Sbjct: 203 LSI 205


>ref|XP_003635004.1| PREDICTED: putative F-box/LRR-repeat protein At5g02930-like [Vitis
           vinifera]
          Length = 610

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 71/210 (33%), Positives = 100/210 (47%)
 Frame = +1

Query: 97  GNDTELQKSWELSQDDIKDQNRISNLPDDILFHVLSLLEMKDVVKTGVLSRRWGHLWTNV 276
           G+D E     E+S      ++ IS L D IL  +LS L MK VV T +LS+RW  LWT V
Sbjct: 58  GDDDEDDGDEEISSR----KDGISELSDSILIRILSFLPMKYVVATSILSKRWQFLWTMV 113

Query: 277 RTLDFCGPSSCEEEAREKFVSFVDYTLLFNESKTIKTFHLLLELTEAFPEDISEEEAKRV 456
             L F           E FV+ +D TL+ +++  IK F +       F   ++       
Sbjct: 114 PNLVF-----RFRRRDEHFVNSIDKTLVLHQNSQIKKFLIDFTYQSQFQSSVNV------ 162

Query: 457 KELCLHIDRWVRLAVRKKVEIVYLDFFTVNTRWRGCLLSLYPYNLPCSLYINNTIKSLLL 636
                    W+R A RK VE ++L  F V    R   +  Y + LP  LY N++I  L L
Sbjct: 163 ---------WIRHATRKNVEELHLQ-FRVGQHIRSSPMD-YAHALPQFLYANSSIVKLSL 211

Query: 637 ASCSIDPTRQLQWKYLKILRLFDVKLCEEL 726
             C+I PT  + W  LK L +  V+LC++L
Sbjct: 212 WFCNIKPTWVISWPSLKTLSIGSVELCDDL 241


>emb|CAN78503.1| hypothetical protein VITISV_023071 [Vitis vinifera]
          Length = 891

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 71/210 (33%), Positives = 100/210 (47%)
 Frame = +1

Query: 97  GNDTELQKSWELSQDDIKDQNRISNLPDDILFHVLSLLEMKDVVKTGVLSRRWGHLWTNV 276
           G+D E     E+S      ++ IS L D IL  +LS L MK VV T +LS+RW  LWT V
Sbjct: 58  GDDDEDDGDEEISSR----KDGISELSDSILIRILSFLPMKYVVATSILSKRWQFLWTMV 113

Query: 277 RTLDFCGPSSCEEEAREKFVSFVDYTLLFNESKTIKTFHLLLELTEAFPEDISEEEAKRV 456
             L F           E FV+ +D TL+ +++  IK F +       F   ++       
Sbjct: 114 PNLVF-----RFRRRDEHFVNSIDKTLVLHQNSQIKKFLIDFTYQSQFQSSVNV------ 162

Query: 457 KELCLHIDRWVRLAVRKKVEIVYLDFFTVNTRWRGCLLSLYPYNLPCSLYINNTIKSLLL 636
                    W+R A RK VE ++L  F V    R   +  Y + LP  LY N++I  L L
Sbjct: 163 ---------WIRHATRKNVEELHLQ-FRVGQHIRSSPMD-YAHALPQFLYANSSIVKLSL 211

Query: 637 ASCSIDPTRQLQWKYLKILRLFDVKLCEEL 726
             C+I PT  + W  LK L +  V+LC++L
Sbjct: 212 WFCNIKPTWVISWPSLKTLSIGSVELCDDL 241


>ref|XP_002516561.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223544381|gb|EEF45902.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 348

 Score = 90.5 bits (223), Expect = 3e-16
 Identities = 55/182 (30%), Positives = 90/182 (49%), Gaps = 1/182 (0%)
 Frame = +1

Query: 151 DQNRISNLPDDILFHVLS-LLEMKDVVKTGVLSRRWGHLWTNVRTLDFCGPSSCEEEARE 327
           +++ IS+LPD ++ H+LS LL  ++ VKTG+LS+RW   WT V+ L+F  P    +E  +
Sbjct: 19  EEDGISSLPDTLIHHILSFLLSTEEAVKTGILSKRWRDQWTYVQNLNFNYPYCFSDEKLK 78

Query: 328 KFVSFVDYTLLFNESKTIKTFHLLLELTEAFPEDISEEEAKRVKELCLHIDRWVRLAVRK 507
            F  F+  TL+ N    I  F +   L+            K + E    I   +R A++K
Sbjct: 79  CFSKFIHNTLVLNSCSKINKFSISPRLS----------SDKYMSEYQSQISLCMRFAIKK 128

Query: 508 KVEIVYLDFFTVNTRWRGCLLSLYPYNLPCSLYINNTIKSLLLASCSIDPTRQLQWKYLK 687
           + +++ LDF   N            Y LP   Y N+++  + L+SC       + W+ LK
Sbjct: 129 EAKVLTLDFHPSN----------QGYRLPQFFYSNDSVTEMTLSSCGFSLNADVNWRSLK 178

Query: 688 IL 693
           +L
Sbjct: 179 VL 180


>gb|AAG13047.1|AC011807_6 Hypothetical protein [Arabidopsis thaliana]
          Length = 175

 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 2/188 (1%)
 Frame = +1

Query: 145 IKDQNRISNLPDDILFHVLSLLEMKDVVKTGVLSRRWGHLWTNVRTLDFCGPSSCEEEAR 324
           ++D + IS+LPD IL   LSL+  K  ++T VLS+RW H+W+   +LDF       ++  
Sbjct: 22  LEDVDSISSLPDVILQENLSLIPTKFAIRTSVLSKRWRHVWSETPSLDF-------DDCY 74

Query: 325 EKFVSFVDYTLLFNESKTIKTFHLLLELTEAFPEDISEEEAKRVKELCLHIDRWVRLAVR 504
           +  V F+D TL    ++ I TF L +      P                +ID W++ A+ 
Sbjct: 75  KLDVDFIDKTLALYRARKIMTFDLWITNGINLP----------------YIDGWIKFAMS 118

Query: 505 KKVEIVYLDFFTVNTRWRGCLLSLYPYNLPCSLYINNTIKSLLLA--SCSIDPTRQLQWK 678
           + VE ++L F                Y++P  LYIN+++K L+L   S  ++P   + W 
Sbjct: 119 RNVENLFLSF------------DFRLYDVPDYLYINSSVKQLVLGTESSELNPRCSVSWS 166

Query: 679 YLKILRLF 702
            L  L LF
Sbjct: 167 SLTKLSLF 174