BLASTX nr result

ID: Coptis21_contig00021765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021765
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513447.1| conserved hypothetical protein [Ricinus comm...   233   1e-59
ref|XP_002303872.1| predicted protein [Populus trichocarpa] gi|2...   211   4e-53
ref|XP_003597478.1| Bifunctional protein aas [Medicago truncatul...   210   1e-52
emb|CBI16432.3| unnamed protein product [Vitis vinifera]              206   2e-51
ref|XP_002283091.1| PREDICTED: uncharacterized protein LOC100253...   206   2e-51

>ref|XP_002513447.1| conserved hypothetical protein [Ricinus communis]
            gi|223547355|gb|EEF48850.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2278

 Score =  233 bits (594), Expect = 1e-59
 Identities = 112/139 (80%), Positives = 123/139 (88%)
 Frame = -2

Query: 498  TAILFSLLTFIKNPLLWLQTMSKYRATHNASPNFTFELVVRRLESYREKTPSYDLSSMKF 319
            +AILFS LTFIKNPLLWLQTMSKYRATH+A PNF FELV+RRLES REK  +YDLSSM F
Sbjct: 706  SAILFSPLTFIKNPLLWLQTMSKYRATHSAGPNFAFELVIRRLESDREKVRNYDLSSMVF 765

Query: 318  LMIAAEPVRQKTLKRFLELTRPFLLSQEVMTPGYDLAENCVYVSCAFGEGDPILVDWQGR 139
            LM+AAEPVRQKTLKRF+ELTRPF L QEVM PGY LAENCV+VSCAFGEG PIL+DWQGR
Sbjct: 766  LMVAAEPVRQKTLKRFIELTRPFGLYQEVMAPGYGLAENCVFVSCAFGEGKPILIDWQGR 825

Query: 138  ICCGYTTRSDLNVDIRIVD 82
            +CCGY   +D +VDIRIVD
Sbjct: 826  VCCGYANPADADVDIRIVD 844


>ref|XP_002303872.1| predicted protein [Populus trichocarpa] gi|222841304|gb|EEE78851.1|
            predicted protein [Populus trichocarpa]
          Length = 1078

 Score =  211 bits (538), Expect = 4e-53
 Identities = 101/140 (72%), Positives = 121/140 (86%), Gaps = 1/140 (0%)
 Frame = -2

Query: 498  TAILFSLLTFIKNPLLWLQTMSKYRATHNASPNFTFELVVRRLE-SYREKTPSYDLSSMK 322
            +AILFS +TFIKNPLLWLQ MSKY ATH+A PNF FEL++RRLE + ++K  ++DLSS+ 
Sbjct: 739  SAILFSPMTFIKNPLLWLQIMSKYNATHSAGPNFAFELLIRRLEYADKDKVRNFDLSSLI 798

Query: 321  FLMIAAEPVRQKTLKRFLELTRPFLLSQEVMTPGYDLAENCVYVSCAFGEGDPILVDWQG 142
            FLM+AAEPVRQ+TLKRF+ELTRPF LSQEVM PGY LAENCV+VSCA+GEG PILVDWQG
Sbjct: 799  FLMVAAEPVRQRTLKRFVELTRPFGLSQEVMAPGYGLAENCVFVSCAYGEGKPILVDWQG 858

Query: 141  RICCGYTTRSDLNVDIRIVD 82
            R+CCGY   +  ++DIRIVD
Sbjct: 859  RVCCGYVEPNGEDIDIRIVD 878


>ref|XP_003597478.1| Bifunctional protein aas [Medicago truncatula]
            gi|355486526|gb|AES67729.1| Bifunctional protein aas
            [Medicago truncatula]
          Length = 2339

 Score =  210 bits (534), Expect = 1e-52
 Identities = 102/140 (72%), Positives = 119/140 (85%), Gaps = 1/140 (0%)
 Frame = -2

Query: 498  TAILFSLLTFIKNPLLWLQTMSKYRATHNASPNFTFELVVRRLESY-REKTPSYDLSSMK 322
            TA+LFS +TFIK PLLW++TMSKY+ATH+A PNF FELVVRRLES  ++K  + DLSSM 
Sbjct: 750  TALLFSPMTFIKKPLLWIETMSKYQATHSAGPNFAFELVVRRLESSDKDKLQNLDLSSMI 809

Query: 321  FLMIAAEPVRQKTLKRFLELTRPFLLSQEVMTPGYDLAENCVYVSCAFGEGDPILVDWQG 142
            FLM+AAEPVRQKTLKRFLELT P+ LSQ+ M PGY LAENCV+VSCAFGEG+PI VDWQG
Sbjct: 810  FLMVAAEPVRQKTLKRFLELTGPYGLSQKAMAPGYGLAENCVFVSCAFGEGNPIFVDWQG 869

Query: 141  RICCGYTTRSDLNVDIRIVD 82
            R+CCGY    + +VDIRIVD
Sbjct: 870  RVCCGYIHPGNADVDIRIVD 889


>emb|CBI16432.3| unnamed protein product [Vitis vinifera]
          Length = 2221

 Score =  206 bits (524), Expect = 2e-51
 Identities = 96/139 (69%), Positives = 118/139 (84%)
 Frame = -2

Query: 498  TAILFSLLTFIKNPLLWLQTMSKYRATHNASPNFTFELVVRRLESYREKTPSYDLSSMKF 319
            +A+LFS ++FIKNPLLWLQTMSK++ATH+A PNF FELVVRRLES ++   +Y+LSSM F
Sbjct: 700  SAVLFSPMSFIKNPLLWLQTMSKFQATHSAGPNFAFELVVRRLESGKDTVHNYNLSSMIF 759

Query: 318  LMIAAEPVRQKTLKRFLELTRPFLLSQEVMTPGYDLAENCVYVSCAFGEGDPILVDWQGR 139
            LM+AAEPVRQ TLKRF++LT PF L +EV+ PGY LAENCV+VSCA+GEG PILVDWQ R
Sbjct: 760  LMVAAEPVRQNTLKRFVKLTSPFGLCEEVLAPGYGLAENCVFVSCAYGEGKPILVDWQER 819

Query: 138  ICCGYTTRSDLNVDIRIVD 82
            +CCGY    + +VDIR+VD
Sbjct: 820  VCCGYVDTENADVDIRVVD 838


>ref|XP_002283091.1| PREDICTED: uncharacterized protein LOC100253550 [Vitis vinifera]
          Length = 2289

 Score =  206 bits (524), Expect = 2e-51
 Identities = 96/139 (69%), Positives = 118/139 (84%)
 Frame = -2

Query: 498  TAILFSLLTFIKNPLLWLQTMSKYRATHNASPNFTFELVVRRLESYREKTPSYDLSSMKF 319
            +A+LFS ++FIKNPLLWLQTMSK++ATH+A PNF FELVVRRLES ++   +Y+LSSM F
Sbjct: 721  SAVLFSPMSFIKNPLLWLQTMSKFQATHSAGPNFAFELVVRRLESGKDTVHNYNLSSMIF 780

Query: 318  LMIAAEPVRQKTLKRFLELTRPFLLSQEVMTPGYDLAENCVYVSCAFGEGDPILVDWQGR 139
            LM+AAEPVRQ TLKRF++LT PF L +EV+ PGY LAENCV+VSCA+GEG PILVDWQ R
Sbjct: 781  LMVAAEPVRQNTLKRFVKLTSPFGLCEEVLAPGYGLAENCVFVSCAYGEGKPILVDWQER 840

Query: 138  ICCGYTTRSDLNVDIRIVD 82
            +CCGY    + +VDIR+VD
Sbjct: 841  VCCGYVDTENADVDIRVVD 859


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