BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021740
         (1213 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281425.1| PREDICTED: putative nuclease HARBI1 [Vitis v...   520   e-145
ref|XP_002279396.1| PREDICTED: putative nuclease HARBI1 [Vitis v...   497   e-138
ref|XP_004147700.1| PREDICTED: putative nuclease HARBI1-like [Cu...   489   e-136
ref|XP_002531983.1| RNA binding protein, putative [Ricinus commu...   466   e-129
ref|XP_002311148.1| predicted protein [Populus trichocarpa] gi|2...   456   e-126

>ref|XP_002281425.1| PREDICTED: putative nuclease HARBI1 [Vitis vinifera]
            gi|297746131|emb|CBI16187.3| unnamed protein product
            [Vitis vinifera]
          Length = 384

 Score =  520 bits (1338), Expect = e-145
 Identities = 243/342 (71%), Positives = 285/342 (83%), Gaps = 1/342 (0%)
 Frame = +1

Query: 31   DWWDVFSKRITGSLHR-RGPIRIESVFKISRKTFDYICSLVNDDLLAKPSNFTGFNGKPL 207
            DWWD FSKRI G L   +G  + ESVFKISRKTF+YIC+LV +D++AKP NF   NG+P+
Sbjct: 26   DWWDEFSKRIAGLLSSSKGLDKFESVFKISRKTFNYICALVKEDMMAKPGNFIFTNGRPM 85

Query: 208  CVQDQVAVALRRLCSCDSLVTIGESFGMSQATVSHVTWRFVEAMEERGLHHLQWPNTESE 387
            C+ DQVAVALRRL S DSL+TIG++FG++ +TVS VTWRFVE MEER LHHLQWP+TE E
Sbjct: 86   CLNDQVAVALRRLSSGDSLLTIGDAFGLNHSTVSQVTWRFVEIMEERALHHLQWPSTEPE 145

Query: 388  MXXXXXXXXXXQGLPNCCGAIDTTHIRLSLPQVDHSNDVWHDREKRHSMILQVVVDPDMR 567
            +          +GLPNCCGAIDTTHI + LP  D +N VW D E  HSMILQ +VDP+MR
Sbjct: 146  ITEITSKFEKIRGLPNCCGAIDTTHIMMCLPSADSANSVWLDSENHHSMILQAIVDPEMR 205

Query: 568  FRDVLTGWPGSMNESAVLRSSGLFKLCENGKRLNGKKVEMSEGIEVREYIVGDAGFPLLP 747
            FRD++TGWPG M +S+VL+SS  FKLCE G+RLNGKK+E++EG E+ EYIVGD+G+PLLP
Sbjct: 206  FRDIVTGWPGKMKDSSVLQSSNFFKLCEKGQRLNGKKIELAEGSEISEYIVGDSGYPLLP 265

Query: 748  WLVTPYQGKDLSESKSEFNKRHFATRMVAQRALARLKEMWSYIQPEMWRPDKHKLPRIIL 927
            WLVTPYQGK+LSESK+EFN+RHFATRMVAQRALARLKEMW  IQ  MWRPDK++LPRIIL
Sbjct: 266  WLVTPYQGKELSESKAEFNRRHFATRMVAQRALARLKEMWKVIQGVMWRPDKNRLPRIIL 325

Query: 928  VCCLLHNIVIDLEDEVQDEMPLSHNHDSGYRQQMCESVDKNA 1053
            VCCLLHNIVIDLEDEVQDEMPLSH+HD GYRQQ+CES D NA
Sbjct: 326  VCCLLHNIVIDLEDEVQDEMPLSHHHDLGYRQQICESADNNA 367


>ref|XP_002279396.1| PREDICTED: putative nuclease HARBI1 [Vitis vinifera]
          Length = 398

 Score =  497 bits (1280), Expect = e-138
 Identities = 235/342 (68%), Positives = 282/342 (82%), Gaps = 1/342 (0%)
 Frame = +1

Query: 31   DWWDVFSKRITGSLHR-RGPIRIESVFKISRKTFDYICSLVNDDLLAKPSNFTGFNGKPL 207
            DWWD FSKRITG L + R  +  ESVFKISRKTF+YICSLV +D++AKP+NF+  NG PL
Sbjct: 40   DWWDDFSKRITGPLSQSRLSLTFESVFKISRKTFNYICSLVKEDMMAKPANFSASNGNPL 99

Query: 208  CVQDQVAVALRRLCSCDSLVTIGESFGMSQATVSHVTWRFVEAMEERGLHHLQWPNTESE 387
             + D+VA+ALRRL S +S   +G+SFG++Q+TV+ +TW+FVE+ME RGLHHLQWP+TE++
Sbjct: 100  SLNDRVAIALRRLSSGESFSIVGDSFGVNQSTVAQITWKFVESMEVRGLHHLQWPSTEAD 159

Query: 388  MXXXXXXXXXXQGLPNCCGAIDTTHIRLSLPQVDHSNDVWHDREKRHSMILQVVVDPDMR 567
            M          +GLPNCCGA+DTTHI +SL  +  SN VW D +K+HSMILQ +VDP+MR
Sbjct: 160  MEETKSSFEKIRGLPNCCGAVDTTHISMSLSTMGTSNKVWIDHQKKHSMILQAIVDPEMR 219

Query: 568  FRDVLTGWPGSMNESAVLRSSGLFKLCENGKRLNGKKVEMSEGIEVREYIVGDAGFPLLP 747
            FRDV+TGWPGS++ES VL++SG FKL E GKRLNGK +E+SEG  +REYIVGDAGFPLLP
Sbjct: 220  FRDVITGWPGSLSESCVLQNSGFFKLSEEGKRLNGKMIELSEGTYLREYIVGDAGFPLLP 279

Query: 748  WLVTPYQGKDLSESKSEFNKRHFATRMVAQRALARLKEMWSYIQPEMWRPDKHKLPRIIL 927
            WL+TPYQGK LS+ +SEFNKRHFATRMVA+RALARLKEMW  IQ  MWRPD +KLPRIIL
Sbjct: 280  WLLTPYQGKGLSDFQSEFNKRHFATRMVARRALARLKEMWRIIQGVMWRPDTNKLPRIIL 339

Query: 928  VCCLLHNIVIDLEDEVQDEMPLSHNHDSGYRQQMCESVDKNA 1053
            VCCLLHNIVIDLED VQDEMP S+ HD GYRQ+ CESVDK A
Sbjct: 340  VCCLLHNIVIDLEDGVQDEMPFSYKHDPGYRQRSCESVDKTA 381


>ref|XP_004147700.1| PREDICTED: putative nuclease HARBI1-like [Cucumis sativus]
            gi|449513511|ref|XP_004164345.1| PREDICTED: putative
            nuclease HARBI1-like [Cucumis sativus]
          Length = 392

 Score =  489 bits (1258), Expect = e-136
 Identities = 225/341 (65%), Positives = 279/341 (81%)
 Frame = +1

Query: 31   DWWDVFSKRITGSLHRRGPIRIESVFKISRKTFDYICSLVNDDLLAKPSNFTGFNGKPLC 210
            DWWD FS+RITG L +    + ESVFKISRKTF YICSLV + ++AK S+FT  NGKPL 
Sbjct: 35   DWWDEFSQRITGPLSQSKNTKFESVFKISRKTFSYICSLVKEVMMAKTSSFTDLNGKPLS 94

Query: 211  VQDQVAVALRRLCSCDSLVTIGESFGMSQATVSHVTWRFVEAMEERGLHHLQWPNTESEM 390
            + DQVAVALRRLCS +SL  IG+SFG++Q++VS +TWRFVEAMEE+GLHHL WP+TE +M
Sbjct: 95   LNDQVAVALRRLCSGESLSNIGDSFGLNQSSVSQITWRFVEAMEEKGLHHLSWPSTEEDM 154

Query: 391  XXXXXXXXXXQGLPNCCGAIDTTHIRLSLPQVDHSNDVWHDREKRHSMILQVVVDPDMRF 570
                      +GLPNCCG ++TTHI ++LP  + +N +W DREK  SMILQV+VDP+MRF
Sbjct: 155  DKIKSKFKKIRGLPNCCGVVETTHIMMTLPTSESANGIWLDREKNCSMILQVIVDPEMRF 214

Query: 571  RDVLTGWPGSMNESAVLRSSGLFKLCENGKRLNGKKVEMSEGIEVREYIVGDAGFPLLPW 750
             D++TGWPGS++++ VL+SSG FKL ++G+RLNGKK+++SE  E+ EYI+GD+GFPLLPW
Sbjct: 215  CDIITGWPGSLSDALVLQSSGFFKLSQDGERLNGKKMKLSESSELGEYIIGDSGFPLLPW 274

Query: 751  LVTPYQGKDLSESKSEFNKRHFATRMVAQRALARLKEMWSYIQPEMWRPDKHKLPRIILV 930
            L+TPYQGK L + ++EFNKRHFATR+VAQRAL RLKEMW  I+  MW+PDKH+LPRIILV
Sbjct: 275  LLTPYQGKGLPDYQAEFNKRHFATRLVAQRALTRLKEMWKIIKGVMWKPDKHRLPRIILV 334

Query: 931  CCLLHNIVIDLEDEVQDEMPLSHNHDSGYRQQMCESVDKNA 1053
            CCLLHNIVID+EDEVQDEMPLSH+HD  YRQQ CE VD  A
Sbjct: 335  CCLLHNIVIDMEDEVQDEMPLSHHHDPSYRQQSCEFVDNTA 375


>ref|XP_002531983.1| RNA binding protein, putative [Ricinus communis]
            gi|223528380|gb|EEF30419.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 591

 Score =  466 bits (1200), Expect = e-129
 Identities = 224/341 (65%), Positives = 268/341 (78%), Gaps = 1/341 (0%)
 Frame = +1

Query: 31   DWWDVFSKRITGSLH-RRGPIRIESVFKISRKTFDYICSLVNDDLLAKPSNFTGFNGKPL 207
            DWWD FSKRITG L   R   + ESVFKISRKTF+YICSLVN+DL A+ SN TG NGKPL
Sbjct: 36   DWWDDFSKRITGPLSGSRNTKKFESVFKISRKTFNYICSLVNNDLKARQSNLTGTNGKPL 95

Query: 208  CVQDQVAVALRRLCSCDSLVTIGESFGMSQATVSHVTWRFVEAMEERGLHHLQWPNTESE 387
               DQVA+ALRRL S +SL +IG+SFG++Q+TVSHVTWRFVEAMEERGLHHL+WP+TE+E
Sbjct: 96   SPNDQVAIALRRLSSGESLSSIGDSFGVNQSTVSHVTWRFVEAMEERGLHHLRWPSTETE 155

Query: 388  MXXXXXXXXXXQGLPNCCGAIDTTHIRLSLPQVDHSNDVWHDREKRHSMILQVVVDPDMR 567
            M            LPNCCG IDTTH+ ++LP VDHSNDVW DREK HSM+LQ +VDPDMR
Sbjct: 156  MAAIKSKFEKIHSLPNCCGVIDTTHVVMTLPAVDHSNDVWIDREKNHSMVLQAIVDPDMR 215

Query: 568  FRDVLTGWPGSMNESAVLRSSGLFKLCENGKRLNGKKVEMSEGIEVREYIVGDAGFPLLP 747
            FRDV+ G+PGS++++ VL++S  FKL E GKRLNGKK+E+ EG E+ EYI+GDAGFPL+P
Sbjct: 216  FRDVIVGYPGSLSDALVLQNSSFFKLSEEGKRLNGKKMELMEGTELGEYIIGDAGFPLMP 275

Query: 748  WLVTPYQGKDLSESKSEFNKRHFATRMVAQRALARLKEMWSYIQPEMWRPDKHKLPRIIL 927
            WL TPYQ     E + EFN RH AT ++AQ AL RLKE+W  I   MW PDK++LPRII 
Sbjct: 276  WLFTPYQHPH-QEHQIEFNNRHSATMLLAQIALTRLKEIWRIIHGVMWLPDKNRLPRIIF 334

Query: 928  VCCLLHNIVIDLEDEVQDEMPLSHNHDSGYRQQMCESVDKN 1050
            VCCLLHNIVID+ED+V DEMP+S +HD  YRQQ+CES   +
Sbjct: 335  VCCLLHNIVIDMEDKVLDEMPVSDSHDKDYRQQICESASNS 375


>ref|XP_002311148.1| predicted protein [Populus trichocarpa] gi|222850968|gb|EEE88515.1|
            predicted protein [Populus trichocarpa]
          Length = 407

 Score =  456 bits (1173), Expect = e-126
 Identities = 222/341 (65%), Positives = 270/341 (79%), Gaps = 2/341 (0%)
 Frame = +1

Query: 31   DWWDV-FSKRITG-SLHRRGPIRIESVFKISRKTFDYICSLVNDDLLAKPSNFTGFNGKP 204
            DWWD  FSKRITG S       + ES FKISRKTF+YICSLV +DL A+ SNFTG NGKP
Sbjct: 44   DWWDDDFSKRITGPSSESNNSKKFESFFKISRKTFNYICSLVKEDLRARQSNFTGSNGKP 103

Query: 205  LCVQDQVAVALRRLCSCDSLVTIGESFGMSQATVSHVTWRFVEAMEERGLHHLQWPNTES 384
            L V DQVAVALRRL S +SL  IG+  G++Q+TVS +TWRFVEAMEERGLHHL WP+TE+
Sbjct: 104  LSVTDQVAVALRRLSSGESLSNIGDLLGINQSTVSQITWRFVEAMEERGLHHLCWPSTEA 163

Query: 385  EMXXXXXXXXXXQGLPNCCGAIDTTHIRLSLPQVDHSNDVWHDREKRHSMILQVVVDPDM 564
            EM           GLPNCCG+IDTTHI ++LP VD SNDVW DREK HSM+LQ +VDPDM
Sbjct: 164  EMEEIKSNFEKICGLPNCCGSIDTTHIVMTLPTVDRSNDVWIDREKNHSMLLQAIVDPDM 223

Query: 565  RFRDVLTGWPGSMNESAVLRSSGLFKLCENGKRLNGKKVEMSEGIEVREYIVGDAGFPLL 744
            RFRDV+ G+PGS++++ VL++S  +KLCE  KRLNGKK+E+ EG+E+ EYI+GD+GFPLL
Sbjct: 224  RFRDVIVGYPGSLSDALVLQNSSFYKLCEEEKRLNGKKIELQEGMELGEYIIGDSGFPLL 283

Query: 745  PWLVTPYQGKDLSESKSEFNKRHFATRMVAQRALARLKEMWSYIQPEMWRPDKHKLPRII 924
             WL+TPYQ   LS+ ++EFNKRH  T++VAQ ALARLKEMW  I   MW PDK++LPRII
Sbjct: 284  SWLLTPYQNA-LSDHQAEFNKRHSETQVVAQIALARLKEMWRIIHGVMWLPDKNRLPRII 342

Query: 925  LVCCLLHNIVIDLEDEVQDEMPLSHNHDSGYRQQMCESVDK 1047
             VCCLLHNIVID+ED+  +E+P SH HD+ YRQQ+CE+V+K
Sbjct: 343  FVCCLLHNIVIDMEDKGVEELPSSHRHDTDYRQQICETVNK 383