BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021737
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145443.1| PREDICTED: mediator of RNA polymerase II tra...   120   1e-25
ref|XP_002268778.1| PREDICTED: mediator of RNA polymerase II tra...   119   3e-25
ref|XP_003546670.1| PREDICTED: putative mediator of RNA polymera...   117   7e-25
ref|XP_003595880.1| Mediator of RNA polymerase II transcription ...   114   8e-24
ref|XP_003531466.1| PREDICTED: putative mediator of RNA polymera...   113   2e-23

>ref|XP_004145443.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           22b-like [Cucumis sativus]
           gi|449527521|ref|XP_004170759.1| PREDICTED: mediator of
           RNA polymerase II transcription subunit 22b-like
           [Cucumis sativus]
          Length = 150

 Score =  120 bits (300), Expect = 1e-25
 Identities = 62/82 (75%), Positives = 70/82 (85%)
 Frame = -2

Query: 246 LVNVARVNDPPVRNSQXXXXXXXXXXXMVQAADTLLKLVSELKQTAIFSGFASLNEHVEQ 67
           LVNV+RVNDPPVRNSQ           MVQAAD+LLKLVSELKQTAIFSGFASLN+HVEQ
Sbjct: 44  LVNVSRVNDPPVRNSQESFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQ 103

Query: 66  RTIEFNQQAERTDRMLARIGEE 1
           R +EFNQQA++TDR+L+RIGEE
Sbjct: 104 RIVEFNQQAQQTDRLLSRIGEE 125


>ref|XP_002268778.1| PREDICTED: mediator of RNA polymerase II transcription subunit 22
           [Vitis vinifera] gi|297736089|emb|CBI24127.3| unnamed
           protein product [Vitis vinifera]
          Length = 150

 Score =  119 bits (298), Expect = 3e-25
 Identities = 63/82 (76%), Positives = 68/82 (82%)
 Frame = -2

Query: 246 LVNVARVNDPPVRNSQXXXXXXXXXXXMVQAADTLLKLVSELKQTAIFSGFASLNEHVEQ 67
           LVNVARVNDPPVRNSQ           MVQAAD+LLKLVSELKQTAIFSGFASLN+HV+Q
Sbjct: 44  LVNVARVNDPPVRNSQEAFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVDQ 103

Query: 66  RTIEFNQQAERTDRMLARIGEE 1
           R  EFNQQAE+TD +LARIGEE
Sbjct: 104 REAEFNQQAEKTDHLLARIGEE 125


>ref|XP_003546670.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 22-like [Glycine max]
          Length = 156

 Score =  117 bits (294), Expect = 7e-25
 Identities = 62/82 (75%), Positives = 68/82 (82%)
 Frame = -2

Query: 246 LVNVARVNDPPVRNSQXXXXXXXXXXXMVQAADTLLKLVSELKQTAIFSGFASLNEHVEQ 67
           LVNVARVNDPPVRNSQ           MVQAAD+LLKLVSELKQTAIFSGFASLN+HVE+
Sbjct: 50  LVNVARVNDPPVRNSQEAFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEE 109

Query: 66  RTIEFNQQAERTDRMLARIGEE 1
           R IEFNQ AE+TDR L+R+GEE
Sbjct: 110 RRIEFNQLAEKTDRTLSRVGEE 131


>ref|XP_003595880.1| Mediator of RNA polymerase II transcription subunit [Medicago
           truncatula] gi|355484928|gb|AES66131.1| Mediator of RNA
           polymerase II transcription subunit [Medicago
           truncatula]
          Length = 150

 Score =  114 bits (285), Expect = 8e-24
 Identities = 61/82 (74%), Positives = 66/82 (80%)
 Frame = -2

Query: 246 LVNVARVNDPPVRNSQXXXXXXXXXXXMVQAADTLLKLVSELKQTAIFSGFASLNEHVEQ 67
           LVNVARVNDPPVRNSQ           MVQAAD+LLKLVSELKQTAIFSGFASLN+HVEQ
Sbjct: 44  LVNVARVNDPPVRNSQEAFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQ 103

Query: 66  RTIEFNQQAERTDRMLARIGEE 1
           R +EFNQ AE+TD  L+ IGEE
Sbjct: 104 RRLEFNQLAEKTDHTLSTIGEE 125


>ref|XP_003531466.1| PREDICTED: putative mediator of RNA polymerase II transcription
           subunit 22-like [Glycine max]
          Length = 158

 Score =  113 bits (282), Expect = 2e-23
 Identities = 61/82 (74%), Positives = 66/82 (80%)
 Frame = -2

Query: 246 LVNVARVNDPPVRNSQXXXXXXXXXXXMVQAADTLLKLVSELKQTAIFSGFASLNEHVEQ 67
           LVNVARVNDP VRNSQ           MVQAAD+LLKLVSELKQTAIFSGFASLN+HVEQ
Sbjct: 52  LVNVARVNDPLVRNSQEAFMMEMRAARMVQAADSLLKLVSELKQTAIFSGFASLNDHVEQ 111

Query: 66  RTIEFNQQAERTDRMLARIGEE 1
           R IEFNQ AE+TD  L+R+GEE
Sbjct: 112 RRIEFNQLAEKTDHTLSRVGEE 133