BLASTX nr result

ID: Coptis21_contig00021735 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021735
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305251.1| predicted protein [Populus trichocarpa] gi|2...   122   7e-26
ref|XP_002333388.1| predicted protein [Populus trichocarpa] gi|2...   118   8e-25
ref|XP_002526190.1| ATP binding protein, putative [Ricinus commu...   107   2e-21
ref|XP_002336092.1| predicted protein [Populus trichocarpa] gi|2...   105   9e-21
ref|XP_002267012.2| PREDICTED: uncharacterized protein LOC100267...   101   1e-19

>ref|XP_002305251.1| predicted protein [Populus trichocarpa] gi|222848215|gb|EEE85762.1|
            predicted protein [Populus trichocarpa]
          Length = 1011

 Score =  122 bits (305), Expect = 7e-26
 Identities = 60/129 (46%), Positives = 82/129 (63%)
 Frame = -3

Query: 633  HPQQRKRTLTVMDGASSQLLEQYKVHGLLNLLWTVDVMMQGSTIIQVLMFWDILPSSEIP 454
            H  ++KR+L V  G SS L+EQY V G LN++WTVD++ + S  IQVL  WDILPSS+IP
Sbjct: 880  HHSRKKRSLMVHSGISSPLIEQYNVSGQLNMIWTVDILQENSFCIQVLKVWDILPSSDIP 939

Query: 453  KLAKCLDIIFGRYTVEKWNCCRFKCIEGKLEVPMSWDIIPDAVKLDNIRNIERDQLLTEF 274
            KLA  LD +F  YT E+ N C +KC+EG L VPM W +   +    +  + +  QL    
Sbjct: 940  KLAPSLDTLFRNYTEEQMNRCLYKCMEGNLVVPMRWTVDSSSDHQGSCGDADAVQLPKSL 999

Query: 273  ASLRMKEDP 247
            ASL + ++P
Sbjct: 1000 ASLCLDDEP 1008


>ref|XP_002333388.1| predicted protein [Populus trichocarpa] gi|222836389|gb|EEE74796.1|
            predicted protein [Populus trichocarpa]
          Length = 1087

 Score =  118 bits (296), Expect = 8e-25
 Identities = 59/134 (44%), Positives = 85/134 (63%)
 Frame = -3

Query: 624  QRKRTLTVMDGASSQLLEQYKVHGLLNLLWTVDVMMQGSTIIQVLMFWDILPSSEIPKLA 445
            ++KR+L V  G SS L+EQY V G LN++WTVD++ + S  I VL  WDILPSS+IPKLA
Sbjct: 930  RKKRSLMVPSGISSPLIEQYNVSGQLNMVWTVDILQENSFWIHVLKVWDILPSSDIPKLA 989

Query: 444  KCLDIIFGRYTVEKWNCCRFKCIEGKLEVPMSWDIIPDAVKLDNIRNIERDQLLTEFASL 265
              LD +F  YT E+ N C +KC+EG L VPM W +   + +  +  + +  QL    ASL
Sbjct: 990  MSLDTLFWNYTEEQMNRCLYKCMEGNLVVPMRWTVDSCSDRQGSCGDADAVQLPKSLASL 1049

Query: 264  RMKEDPRRPAQGSR 223
             ++++P    + +R
Sbjct: 1050 CLEDEPGTTGKAAR 1063


>ref|XP_002526190.1| ATP binding protein, putative [Ricinus communis]
           gi|223534494|gb|EEF36194.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 782

 Score =  107 bits (267), Expect = 2e-21
 Identities = 51/117 (43%), Positives = 74/117 (63%)
 Frame = -3

Query: 603 VMDGASSQLLEQYKVHGLLNLLWTVDVMMQGSTIIQVLMFWDILPSSEIPKLAKCLDIIF 424
           V DG S QLL+QYKV+  LN++W+VD++ + S  IQVL  WD+L SS + KLA+ LD +F
Sbjct: 648 VHDGISFQLLQQYKVNEQLNIVWSVDILQENSFQIQVLKIWDVLSSSHVAKLAESLDNLF 707

Query: 423 GRYTVEKWNCCRFKCIEGKLEVPMSWDIIPDAVKLDNIRNIERDQLLTEFASLRMKE 253
            +YT++K NCC++KC E  L VPM W +    V   +       QL    A+L +++
Sbjct: 708 RKYTIDKINCCKYKCFERNLVVPMRWPVNSSNVHRGSTSGTNLLQLSESLAALSLRD 764


>ref|XP_002336092.1| predicted protein [Populus trichocarpa] gi|222872079|gb|EEF09210.1|
            predicted protein [Populus trichocarpa]
          Length = 1079

 Score =  105 bits (261), Expect = 9e-21
 Identities = 55/133 (41%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
 Frame = -3

Query: 618  KRTLTVMDGASSQLLEQYKVHGLLNLLWTVDVMMQGSTIIQVLMFWDILPSSEIPKLAKC 439
            KR + V+ G SS+LLE Y+V+G L+L+WTVD+M +     Q+L  WD+L   +  +LA+ 
Sbjct: 941  KRNIIVLHGTSSELLENYRVNGQLSLIWTVDIMKENKNDTQILKVWDVLSLRDSLELARS 1000

Query: 438  LDIIFGRYTVEKWNCCRFKCIEGKLEVPMSWDIIPDAVKLDNIRNIERDQLLTE-FASLR 262
            LD + G YT  K N CR KC EG L VPM W +   A    +    +  QLL++  ASL 
Sbjct: 1001 LDAVVGNYTENKMNRCRHKCTEGDLVVPMRWSMSSGAGLESSNPETDPAQLLSQPLASLV 1060

Query: 261  MKEDPRRPAQGSR 223
            ++++   PA  SR
Sbjct: 1061 IRDESEAPATTSR 1073


>ref|XP_002267012.2| PREDICTED: uncharacterized protein LOC100267290 [Vitis vinifera]
          Length = 1115

 Score =  101 bits (252), Expect = 1e-19
 Identities = 46/83 (55%), Positives = 57/83 (68%)
 Frame = -3

Query: 594  GASSQLLEQYKVHGLLNLLWTVDVMMQGSTIIQVLMFWDILPSSEIPKLAKCLDIIFGRY 415
            G  S+L +QYKV+GLL+L+WT D+  + S   QVL  WDILP SE  KLA+ L+ + G Y
Sbjct: 998  GTCSELFQQYKVNGLLDLVWTTDIFKENSNCTQVLKVWDILPRSETSKLARRLETLLGNY 1057

Query: 414  TVEKWNCCRFKCIEGKLEVPMSW 346
            TV   N C+ KCIEG LEVPM W
Sbjct: 1058 TVNDMNRCKVKCIEGNLEVPMRW 1080


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