BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021732
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24272.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containi...   109   2e-22
emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]   109   2e-22
gb|ABR16216.1| unknown [Picea sitchensis]                              90   2e-16
emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]    89   5e-16

>emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  109 bits (273), Expect = 2e-22
 Identities = 54/83 (65%), Positives = 67/83 (80%)
 Frame = -3

Query: 249 ALNFLRGMVISDIEPNKVTIVSVLPACARLAALRQGKEIHQFIIRRGFDMHIAIWNGLID 70
           AL+ LR M +S++E N VT+VS LPAC++LAALRQGKEIHQFIIR G D    I N LID
Sbjct: 341 ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLID 400

Query: 69  MYGRCGLIKKTRKAFDLIPERDI 1
           MYGRCG I+K+R+ FDL+P+RD+
Sbjct: 401 MYGRCGSIQKSRRIFDLMPQRDL 423



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
 Frame = -3

Query: 249 ALNFLRGMVISDIEPNKVTIVSVLPACARLAALRQGKEIHQFIIR-RGFDMHIAIWNGLI 73
           ALN  R MV+  ++PN +TI S + AC  L+ LR G+EIH + I+    D  + + N L+
Sbjct: 196 ALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLV 255

Query: 72  DMYGRCGLIKKTRKAFDLIPERDI 1
           D Y +C  ++  R+ F +I + D+
Sbjct: 256 DYYAKCRSVEVARRKFGMIKQTDL 279


>ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  109 bits (273), Expect = 2e-22
 Identities = 54/83 (65%), Positives = 67/83 (80%)
 Frame = -3

Query: 249 ALNFLRGMVISDIEPNKVTIVSVLPACARLAALRQGKEIHQFIIRRGFDMHIAIWNGLID 70
           AL+ LR M +S++E N VT+VS LPAC++LAALRQGKEIHQFIIR G D    I N LID
Sbjct: 584 ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLID 643

Query: 69  MYGRCGLIKKTRKAFDLIPERDI 1
           MYGRCG I+K+R+ FDL+P+RD+
Sbjct: 644 MYGRCGSIQKSRRIFDLMPQRDL 666



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
 Frame = -3

Query: 249 ALNFLRGMVISDIEPNKVTIVSVLPACARLAALRQGKEIHQFIIR-RGFDMHIAIWNGLI 73
           AL+  R MV+  ++PN +TI S + AC  L+ LR G+EIH + I+    D  + + N L+
Sbjct: 346 ALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLV 405

Query: 72  DMYGRCGLIKKTRKAFDLIPERDI 1
           D Y +C  ++  R+ F +I + D+
Sbjct: 406 DYYAKCRSVEVARRKFGMIKQTDL 429



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 26/83 (31%), Positives = 43/83 (51%)
 Frame = -3

Query: 249 ALNFLRGMVISDIEPNKVTIVSVLPACARLAALRQGKEIHQFIIRRGFDMHIAIWNGLID 70
           AL F + M    ++PN  TI   L AC ++  L+ GKEIH +++R   ++   + + LI 
Sbjct: 483 ALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALIS 542

Query: 69  MYGRCGLIKKTRKAFDLIPERDI 1
           MY  C  ++     F  +  RD+
Sbjct: 543 MYSGCDSLEVACSVFSELSTRDV 565


>emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  109 bits (273), Expect = 2e-22
 Identities = 54/83 (65%), Positives = 67/83 (80%)
 Frame = -3

Query: 249 ALNFLRGMVISDIEPNKVTIVSVLPACARLAALRQGKEIHQFIIRRGFDMHIAIWNGLID 70
           AL+ LR M +S++E N VT+VS LPAC++LAALRQGKEIHQFIIR G D    I N LID
Sbjct: 584 ALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLID 643

Query: 69  MYGRCGLIKKTRKAFDLIPERDI 1
           MYGRCG I+K+R+ FDL+P+RD+
Sbjct: 644 MYGRCGSIQKSRRIFDLMPQRDL 666



 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
 Frame = -3

Query: 249 ALNFLRGMVISDIEPNKVTIVSVLPACARLAALRQGKEIHQFIIR-RGFDMHIAIWNGLI 73
           AL+  R MV+  ++PN +TI S + AC  L+ LR G+EIH + I+    D  + + N L+
Sbjct: 346 ALSVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLV 405

Query: 72  DMYGRCGLIKKTRKAFDLIPERDI 1
           D Y +C  ++  R+ F +I + D+
Sbjct: 406 DYYAKCRSVEVARRKFGMIKQTDL 429



 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 26/83 (31%), Positives = 43/83 (51%)
 Frame = -3

Query: 249 ALNFLRGMVISDIEPNKVTIVSVLPACARLAALRQGKEIHQFIIRRGFDMHIAIWNGLID 70
           AL F + M    ++PN  TI   L AC ++  L+ GKEIH +++R   ++   + + LI 
Sbjct: 483 ALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALIS 542

Query: 69  MYGRCGLIKKTRKAFDLIPERDI 1
           MY  C  ++     F  +  RD+
Sbjct: 543 MYSGCDSLEVACSVFSELSTRDV 565


>gb|ABR16216.1| unknown [Picea sitchensis]
          Length = 394

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/83 (51%), Positives = 57/83 (68%)
 Frame = -3

Query: 249 ALNFLRGMVISDIEPNKVTIVSVLPACARLAALRQGKEIHQFIIRRGFDMHIAIWNGLID 70
           AL     M   D++ N VT+ SVLPACA+L+ L+QGKEIH +IIRRG D+ I + N LID
Sbjct: 198 ALRMFYEMQGEDVKANYVTVASVLPACAQLSDLQQGKEIHGYIIRRGLDLGIVVGNALID 257

Query: 69  MYGRCGLIKKTRKAFDLIPERDI 1
           MY +CG I   +K FD + +RD+
Sbjct: 258 MYAKCGSIGSAQKVFDKMLQRDV 280



 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/74 (43%), Positives = 49/74 (66%)
 Frame = -3

Query: 222 ISDIEPNKVTIVSVLPACARLAALRQGKEIHQFIIRRGFDMHIAIWNGLIDMYGRCGLIK 43
           +S   P+  T  SVL ACARLA+L +GK I+  II +G +M + + N LI+M+ +CG I+
Sbjct: 106 VSSTNPDNYTYSSVLNACARLASLSEGKLIYDEIISKGCEMDVIVENALINMFMKCGSIE 165

Query: 42  KTRKAFDLIPERDI 1
             R+ FD + ER++
Sbjct: 166 DARRVFDKMCERNL 179


>emb|CAN80898.1| hypothetical protein VITISV_028645 [Vitis vinifera]
          Length = 822

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 42/79 (53%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
 Frame = -3

Query: 237 LRGMVISDIEPNKVTIVSVLPACARLAALRQGKEIHQFIIRR-GFDMHIAIWNGLIDMYG 61
           LR M++S IEPN VTI SVLP CAR+A L+ GKE H ++ RR  F  H+ +WN L+DMY 
Sbjct: 500 LREMLLSGIEPNYVTIASVLPLCARVANLQHGKEFHCYMTRREDFKDHLLLWNALVDMYA 559

Query: 60  RCGLIKKTRKAFDLIPERD 4
           R G + + R+ FD++ ERD
Sbjct: 560 RSGKVLEARRVFDMLGERD 578



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 34/82 (41%), Positives = 43/82 (52%)
 Frame = -3

Query: 249 ALNFLRGMVISDIEPNKVTIVSVLPACARLAALRQGKEIHQFIIRRGFDMHIAIWNGLID 70
           AL+  + MV   I P+  T  SVL AC     L  GKE+H+ I        + + N LI 
Sbjct: 259 ALSAYKQMVKKGIRPDNFTYPSVLKACGEELDLGFGKEVHESINASRIKWSLIVHNALIS 318

Query: 69  MYGRCGLIKKTRKAFDLIPERD 4
           MYG+CG +   R  FD IPERD
Sbjct: 319 MYGKCGKVGIARDLFDKIPERD 340