BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021727
         (378 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]   162   3e-38
emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]   162   3e-38
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi...   160   8e-38
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t...   159   2e-37
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th...   159   2e-37

>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
          Length = 1498

 Score =  162 bits (410), Expect = 3e-38
 Identities = 77/125 (61%), Positives = 96/125 (76%)
 Frame = -2

Query: 377 ITTNAPFELIHSDIWGGYSTPSHTGARYFLTIVDDFSRSTWVYLMRSKSEAKTLLQQFFV 198
           I++  PFE+IH DIWG Y  PS  GA YFLTIVDD++R TW++LMR K EA++LL++FF 
Sbjct: 567 ISSTKPFEIIHCDIWGRYRHPSLFGAHYFLTIVDDYTRFTWIFLMRHKDEAQSLLKRFFS 626

Query: 197 LIQTQFHCKIKALQSDNGTEFHALQLFFQQNGVIHQTSCVGTPQQNGIAERKQRHILEVA 18
            + TQF  +IK  +SDN  EF +L+ FFQ NGVI Q SCV TPQQNG+ ERK RHIL+VA
Sbjct: 627 YVFTQFEFRIKTFRSDNXXEFTSLRSFFQDNGVIFQHSCVYTPQQNGVVERKHRHILQVA 686

Query: 17  RALRF 3
           RAL+F
Sbjct: 687 RALKF 691


>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score =  162 bits (409), Expect = 3e-38
 Identities = 72/125 (57%), Positives = 93/125 (74%)
 Frame = -2

Query: 377  ITTNAPFELIHSDIWGGYSTPSHTGARYFLTIVDDFSRSTWVYLMRSKSEAKTLLQQFFV 198
            ITT  PF L+H D+WG +  P+HTG+RYFLTIVDDFSR TW++LM  KSE ++LL  F  
Sbjct: 818  ITTKFPFSLLHCDVWGPHKIPAHTGSRYFLTIVDDFSRCTWIFLMHHKSETQSLLTNFVQ 877

Query: 197  LIQTQFHCKIKALQSDNGTEFHALQLFFQQNGVIHQTSCVGTPQQNGIAERKQRHILEVA 18
             ++TQFH  ++ ++ DNGTEF  L++F Q  G+  QTSC+ TPQQNG+ ERK RHIL VA
Sbjct: 878  FVKTQFHTDVQTVRMDNGTEFIPLRIFLQNKGIELQTSCIYTPQQNGVVERKHRHILNVA 937

Query: 17   RALRF 3
            R+L F
Sbjct: 938  RSLMF 942


>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1333

 Score =  160 bits (406), Expect = 8e-38
 Identities = 74/119 (62%), Positives = 90/119 (75%)
 Frame = -2

Query: 359 FELIHSDIWGGYSTPSHTGARYFLTIVDDFSRSTWVYLMRSKSEAKTLLQQFFVLIQTQF 180
           FELI+ D+WG Y TPSHTGARYFLTI+DD+SR  W+YL+  KSEA   L+ FF +   QF
Sbjct: 447 FELIYCDLWGPYRTPSHTGARYFLTIIDDYSRGVWLYLLNDKSEAPCHLKNFFAMTDRQF 506

Query: 179 HCKIKALQSDNGTEFHALQLFFQQNGVIHQTSCVGTPQQNGIAERKQRHILEVARALRF 3
           + KIK ++SDNGTEF  L  FFQ+ GVIH+ SCV TP++N   ERK RH+L VARALRF
Sbjct: 507 NVKIKTVRSDNGTEFLCLTKFFQEQGVIHERSCVATPERNDRVERKHRHLLNVARALRF 565


>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1109

 Score =  159 bits (403), Expect = 2e-37
 Identities = 72/119 (60%), Positives = 90/119 (75%)
 Frame = -2

Query: 359 FELIHSDIWGGYSTPSHTGARYFLTIVDDFSRSTWVYLMRSKSEAKTLLQQFFVLIQTQF 180
           F+LIH D+WG Y TPS++GARYFLTIVDD+SR  WVYLM  KSE +  L+ F  L++ QF
Sbjct: 347 FQLIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFIALVERQF 406

Query: 179 HCKIKALQSDNGTEFHALQLFFQQNGVIHQTSCVGTPQQNGIAERKQRHILEVARALRF 3
             +IK ++SDNGTEF  ++ +F   G+ H+TSCVGTP QNG  ERK RHIL +ARALRF
Sbjct: 407 DTEIKTVRSDNGTEFLCMREYFLHKGITHETSCVGTPHQNGRVERKHRHILNIARALRF 465


>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
           gi|7269049|emb|CAB79159.1| LTR retrotransposon like
           protein [Arabidopsis thaliana]
          Length = 1109

 Score =  159 bits (403), Expect = 2e-37
 Identities = 72/119 (60%), Positives = 90/119 (75%)
 Frame = -2

Query: 359 FELIHSDIWGGYSTPSHTGARYFLTIVDDFSRSTWVYLMRSKSEAKTLLQQFFVLIQTQF 180
           F+LIH D+WG Y TPS++GARYFLTIVDD+SR  WVYLM  KSE +  L+ F  L++ QF
Sbjct: 347 FQLIHCDVWGPYRTPSYSGARYFLTIVDDYSRGVWVYLMTDKSETQKHLKDFMALVERQF 406

Query: 179 HCKIKALQSDNGTEFHALQLFFQQNGVIHQTSCVGTPQQNGIAERKQRHILEVARALRF 3
             +IK ++SDNGTEF  ++ +F   G+ H+TSCVGTP QNG  ERK RHIL +ARALRF
Sbjct: 407 DTEIKTVRSDNGTEFLCMREYFLHKGIAHETSCVGTPHQNGRVERKHRHILNIARALRF 465