BLASTX nr result

ID: Coptis21_contig00021718 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021718
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19892.3| unnamed protein product [Vitis vinifera]              129   3e-28
ref|XP_002279681.1| PREDICTED: uncharacterized protein LOC100252...   129   3e-28
ref|XP_004152755.1| PREDICTED: uncharacterized protein LOC101210...   119   2e-25
ref|XP_002510556.1| protein with unknown function [Ricinus commu...   117   1e-24
ref|XP_002319205.1| predicted protein [Populus trichocarpa] gi|2...   117   1e-24

>emb|CBI19892.3| unnamed protein product [Vitis vinifera]
          Length = 533

 Score =  129 bits (323), Expect = 3e-28
 Identities = 69/111 (62%), Positives = 84/111 (75%), Gaps = 7/111 (6%)
 Frame = +3

Query: 3   GSGKTHTIFGSPRHPGMLSLALANIFHCTPCS-------YYISMFEIYSEGGKGEKILDL 161
           GSGKTHT+FG PR PGM+ LAL  IF  T  S       +YIS+FEIYSE GKGE++LDL
Sbjct: 169 GSGKTHTVFGCPREPGMVPLALQQIFKRTEGSGSEATRSFYISIFEIYSERGKGERMLDL 228

Query: 162 SSSDGQDLVLQQSNVKGLQEVMVSSVTAAEAVIARGMLKRATAITNSNCQS 314
           S   G DL +QQS++KGLQEV++S V  AE++IA+GMLKR TA+TNSN QS
Sbjct: 229 SPG-GADLFMQQSSIKGLQEVVISDVAQAESLIAQGMLKRCTAMTNSNSQS 278


>ref|XP_002279681.1| PREDICTED: uncharacterized protein LOC100252261 [Vitis vinifera]
          Length = 1273

 Score =  129 bits (323), Expect = 3e-28
 Identities = 69/111 (62%), Positives = 84/111 (75%), Gaps = 7/111 (6%)
 Frame = +3

Query: 3   GSGKTHTIFGSPRHPGMLSLALANIFHCTPCS-------YYISMFEIYSEGGKGEKILDL 161
           GSGKTHT+FG PR PGM+ LAL  IF  T  S       +YIS+FEIYSE GKGE++LDL
Sbjct: 194 GSGKTHTVFGCPREPGMVPLALQQIFKRTEGSGSEATRSFYISIFEIYSERGKGERMLDL 253

Query: 162 SSSDGQDLVLQQSNVKGLQEVMVSSVTAAEAVIARGMLKRATAITNSNCQS 314
           S   G DL +QQS++KGLQEV++S V  AE++IA+GMLKR TA+TNSN QS
Sbjct: 254 SPG-GADLFMQQSSIKGLQEVVISDVAQAESLIAQGMLKRCTAMTNSNSQS 303


>ref|XP_004152755.1| PREDICTED: uncharacterized protein LOC101210482 [Cucumis sativus]
          Length = 894

 Score =  119 bits (299), Expect = 2e-25
 Identities = 65/110 (59%), Positives = 81/110 (73%), Gaps = 6/110 (5%)
 Frame = +3

Query: 3   GSGKTHTIFGSPRHPGMLSLALANIFHC------TPCSYYISMFEIYSEGGKGEKILDLS 164
           GSGKTHTIFGSPR PGM+ LAL +IF        T  SYY+S+FEIYSE GKGEK+ DLS
Sbjct: 201 GSGKTHTIFGSPRVPGMVPLALQHIFRTESSDSKTSRSYYLSIFEIYSEKGKGEKMNDLS 260

Query: 165 SSDGQDLVLQQSNVKGLQEVMVSSVTAAEAVIARGMLKRATAITNSNCQS 314
           + DG +L +QQ  +KGL+EV++S    AE+++A  M KRATAITN+N  S
Sbjct: 261 A-DGGELTMQQFTIKGLKEVLISKAGEAESLVACAMAKRATAITNANSTS 309


>ref|XP_002510556.1| protein with unknown function [Ricinus communis]
           gi|223551257|gb|EEF52743.1| protein with unknown
           function [Ricinus communis]
          Length = 944

 Score =  117 bits (292), Expect = 1e-24
 Identities = 62/111 (55%), Positives = 80/111 (72%), Gaps = 7/111 (6%)
 Frame = +3

Query: 3   GSGKTHTIFGSPRHPGMLSLALANIFHCTPCS-------YYISMFEIYSEGGKGEKILDL 161
           GSGKTHT+FG+ + PGM+ LAL +IF     S       +YIS+FEIYSEGGK E++ DL
Sbjct: 200 GSGKTHTVFGTVKQPGMVPLALQHIFKQNQASGSALSRSFYISIFEIYSEGGKVERMFDL 259

Query: 162 SSSDGQDLVLQQSNVKGLQEVMVSSVTAAEAVIARGMLKRATAITNSNCQS 314
           S  DG DL +QQS +KGLQE+ ++    AE++IA  MLKRATA+TN+N QS
Sbjct: 260 SP-DGVDLSMQQSTIKGLQEIPITDAAQAESLIASAMLKRATAMTNTNSQS 309


>ref|XP_002319205.1| predicted protein [Populus trichocarpa] gi|222857581|gb|EEE95128.1|
           predicted protein [Populus trichocarpa]
          Length = 555

 Score =  117 bits (292), Expect = 1e-24
 Identities = 64/111 (57%), Positives = 79/111 (71%), Gaps = 7/111 (6%)
 Frame = +3

Query: 3   GSGKTHTIFGSPRHPGMLSLALANIF-HCTPCS------YYISMFEIYSEGGKGEKILDL 161
           GSGKTHT+FG+PR PGM+ LAL  IF     C       + +S+FEIYS+ GKGEKI DL
Sbjct: 206 GSGKTHTVFGTPREPGMVHLALKQIFKEAQQCGSKLTREFKVSVFEIYSDRGKGEKISDL 265

Query: 162 SSSDGQDLVLQQSNVKGLQEVMVSSVTAAEAVIARGMLKRATAITNSNCQS 314
           S  DG DL +QQ+ +KGLQEV +SS   AE++IA  MLKR TA+TN+N QS
Sbjct: 266 SP-DGGDLSMQQATIKGLQEVAISSAAQAESLIACAMLKRTTAMTNTNSQS 315


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