BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021703
         (250 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi...   114   8e-24
emb|CBI40590.3| unnamed protein product [Vitis vinifera]              114   8e-24
ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_002301427.1| predicted protein [Populus trichocarpa] gi|2...   107   8e-22
ref|XP_002523296.1| pentatricopeptide repeat-containing protein,...   104   6e-21

>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Vitis vinifera]
          Length = 512

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/82 (65%), Positives = 66/82 (80%)
 Frame = -3

Query: 248 REKGFAKNLFVSNALLEMYAKCGRIDKAMCVFKEIRHMKNLCSWNTTIMGLAVHGRWEAG 69
           R  G+ KNL+VSNALLEMYA+CGRIDKA  VF+EI   +NLCSWN+ IMGLAVHGR +  
Sbjct: 242 RGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHGRCDEA 301

Query: 68  LKLFREMLTGGISPDDITFVGV 3
           ++LF +ML  G +PDD+TFVGV
Sbjct: 302 IELFYKMLREGAAPDDVTFVGV 323


>emb|CBI40590.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/82 (65%), Positives = 66/82 (80%)
 Frame = -3

Query: 248 REKGFAKNLFVSNALLEMYAKCGRIDKAMCVFKEIRHMKNLCSWNTTIMGLAVHGRWEAG 69
           R  G+ KNL+VSNALLEMYA+CGRIDKA  VF+EI   +NLCSWN+ IMGLAVHGR +  
Sbjct: 242 RGNGYFKNLYVSNALLEMYARCGRIDKAWGVFEEIDGRRNLCSWNSMIMGLAVHGRCDEA 301

Query: 68  LKLFREMLTGGISPDDITFVGV 3
           ++LF +ML  G +PDD+TFVGV
Sbjct: 302 IELFYKMLREGAAPDDVTFVGV 323


>ref|XP_003548250.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Glycine max]
          Length = 512

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/82 (64%), Positives = 64/82 (78%)
 Frame = -3

Query: 248 REKGFAKNLFVSNALLEMYAKCGRIDKAMCVFKEIRHMKNLCSWNTTIMGLAVHGRWEAG 69
           R+ GF KNL+VSNA+LEMYAKCG+ID A  VF EI  ++NLCSWN+ IMGLAVHG     
Sbjct: 243 RKNGFFKNLYVSNAVLEMYAKCGKIDVAWKVFNEIGSLRNLCSWNSMIMGLAVHGECCKT 302

Query: 68  LKLFREMLTGGISPDDITFVGV 3
           LKL+ +ML  G SPDD+TFVG+
Sbjct: 303 LKLYDQMLGEGTSPDDVTFVGL 324


>ref|XP_002301427.1| predicted protein [Populus trichocarpa] gi|222843153|gb|EEE80700.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  107 bits (268), Expect = 8e-22
 Identities = 50/82 (60%), Positives = 62/82 (75%)
 Frame = -3

Query: 248 REKGFAKNLFVSNALLEMYAKCGRIDKAMCVFKEIRHMKNLCSWNTTIMGLAVHGRWEAG 69
           R+ G  KNL+VSN LLEMYA+CG+ID A  VF EI   +NLCSWN+ +MGLAVHGR    
Sbjct: 170 RDNGLMKNLYVSNTLLEMYARCGKIDAARHVFNEIGKRRNLCSWNSMMMGLAVHGRSNEA 229

Query: 68  LKLFREMLTGGISPDDITFVGV 3
           L+L+ +ML  GI PDD+TFVG+
Sbjct: 230 LQLYDQMLGEGIEPDDVTFVGL 251


>ref|XP_002523296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537384|gb|EEF39012.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 353

 Score =  104 bits (260), Expect = 6e-21
 Identities = 51/83 (61%), Positives = 62/83 (74%), Gaps = 1/83 (1%)
 Frame = -3

Query: 248 REKGFAKNLFVSNALLEMYAKCGRIDKAMCVF-KEIRHMKNLCSWNTTIMGLAVHGRWEA 72
           RE G  +NL+VSNALLEMYA+CG+ID A  VF K I   +NLCSWN+ IMGLA+HGR   
Sbjct: 242 RENGLLRNLYVSNALLEMYARCGKIDMARKVFDKIIGKRRNLCSWNSMIMGLAIHGRSHD 301

Query: 71  GLKLFREMLTGGISPDDITFVGV 3
            L L+  ML  GI+PDD+TFVG+
Sbjct: 302 ALHLYNRMLIEGIAPDDVTFVGI 324