BLASTX nr result

ID: Coptis21_contig00021699 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021699
         (803 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308547.1| predicted protein [Populus trichocarpa] gi|2...   187   2e-45
ref|XP_002278242.1| PREDICTED: uncharacterized protein LOC100243...   182   7e-44
emb|CAN81798.1| hypothetical protein VITISV_043339 [Vitis vinifera]   182   7e-44
ref|XP_002332339.1| predicted protein [Populus trichocarpa] gi|2...   180   4e-43
ref|XP_002873540.1| hypothetical protein ARALYDRAFT_909170 [Arab...   177   3e-42

>ref|XP_002308547.1| predicted protein [Populus trichocarpa] gi|222854523|gb|EEE92070.1|
           predicted protein [Populus trichocarpa]
          Length = 332

 Score =  187 bits (476), Expect = 2e-45
 Identities = 97/159 (61%), Positives = 111/159 (69%)
 Frame = +2

Query: 2   GILFGMASVISKMGFVFLEQGFSKMLVPICISLSICCSGTGFVYQTRGLKHGRAIVVSTC 181
           GILFGMASVISKMGFVFLEQGFSKMLVP+C+++SICCS TGF YQT+GLKHGRAIV+STC
Sbjct: 167 GILFGMASVISKMGFVFLEQGFSKMLVPLCLTISICCSATGFYYQTQGLKHGRAIVLSTC 226

Query: 182 AAVASIVTGVLAGMLALGEQLPSSPVGRFXXXXXXXXXXXXXXXXXXXARLLQHLPRPVK 361
           AAVASIVTGVLAGMLALGE+LPS+P  RF                     LL+HLPRP++
Sbjct: 227 AAVASIVTGVLAGMLALGERLPSAPAARFSLLLGWLLIVVGVILLVSSTWLLRHLPRPLR 286

Query: 362 RFLSGVEKNXXXXXXXXXXXXXXXXXTVIQASTLHHLIS 478
            F S  ++N                  VI A+TLHHLIS
Sbjct: 287 HFTSSADRNFSLSRSGSLRLKDPNPTAVIHAATLHHLIS 325


>ref|XP_002278242.1| PREDICTED: uncharacterized protein LOC100243991 [Vitis vinifera]
           gi|296081636|emb|CBI20641.3| unnamed protein product
           [Vitis vinifera]
          Length = 347

 Score =  182 bits (462), Expect = 7e-44
 Identities = 101/163 (61%), Positives = 115/163 (70%), Gaps = 4/163 (2%)
 Frame = +2

Query: 2   GILFGMASVISKMGFVFLEQGFSKMLVPICISLSICCSGTGFVYQTRGLKHGRAIVVSTC 181
           GILFGMASVISKMGFVFLEQGFSK+LVPICIS+SICCS TGF+YQTRGLK GRAIVVSTC
Sbjct: 178 GILFGMASVISKMGFVFLEQGFSKILVPICISISICCSATGFIYQTRGLKDGRAIVVSTC 237

Query: 182 AAVASIVTGVLAGMLALGEQLPSSPVGRFXXXXXXXXXXXXXXXXXXXARLLQHLPRPVK 361
           AAVASI+TGVLAGMLALGEQLPS+P  R                      L++HLPRP++
Sbjct: 238 AAVASILTGVLAGMLALGEQLPSAPDARLSLLFGWLLIIIGVILLVSSTWLVRHLPRPLR 297

Query: 362 RFL-SGVEKNXXXXXXXXXXXXXXXXXT---VIQASTLHHLIS 478
            ++ SGVE+N                 +   VIQASTLHHLI+
Sbjct: 298 HYVQSGVERNFGVKQSGSRSGTRVRDSSPSAVIQASTLHHLIT 340


>emb|CAN81798.1| hypothetical protein VITISV_043339 [Vitis vinifera]
          Length = 440

 Score =  182 bits (462), Expect = 7e-44
 Identities = 101/163 (61%), Positives = 115/163 (70%), Gaps = 4/163 (2%)
 Frame = +2

Query: 2   GILFGMASVISKMGFVFLEQGFSKMLVPICISLSICCSGTGFVYQTRGLKHGRAIVVSTC 181
           GILFGMASVISKMGFVFLEQGFSK+LVPICIS+SICCS TGF+YQTRGLK GRAIVVSTC
Sbjct: 271 GILFGMASVISKMGFVFLEQGFSKILVPICISISICCSATGFIYQTRGLKDGRAIVVSTC 330

Query: 182 AAVASIVTGVLAGMLALGEQLPSSPVGRFXXXXXXXXXXXXXXXXXXXARLLQHLPRPVK 361
           AAVASI+TGVLAGMLALGEQLPS+P  R                      L++HLPRP++
Sbjct: 331 AAVASILTGVLAGMLALGEQLPSAPDARLSLLFGWLLIIIGVILLVSSTWLVRHLPRPLR 390

Query: 362 RFL-SGVEKNXXXXXXXXXXXXXXXXXT---VIQASTLHHLIS 478
            ++ SGVE+N                 +   VIQASTLHHLI+
Sbjct: 391 HYVQSGVERNFGVKHSGSRSGTRVRDSSPSAVIQASTLHHLIT 433


>ref|XP_002332339.1| predicted protein [Populus trichocarpa] gi|222831906|gb|EEE70383.1|
           predicted protein [Populus trichocarpa]
          Length = 359

 Score =  180 bits (456), Expect = 4e-43
 Identities = 99/160 (61%), Positives = 111/160 (69%), Gaps = 1/160 (0%)
 Frame = +2

Query: 2   GILFGMASVISKMGFVFLEQGFSKMLVPICISLSICCSGTGFVYQTRGLKHGRAIVVSTC 181
           GILFGMASVISKMGFVFLEQGFS+MLVPIC+S+SICCS TGF YQT+GLKHGRAIVVSTC
Sbjct: 195 GILFGMASVISKMGFVFLEQGFSRMLVPICVSISICCSATGFYYQTQGLKHGRAIVVSTC 254

Query: 182 AAVASIVTGVLAGMLALGEQLPSSPVGRFXXXXXXXXXXXXXXXXXXXARLLQHLPRPVK 361
           AAVASIVTGVLAGMLALGEQLPS+P  RF                     LL+HL  P++
Sbjct: 255 AAVASIVTGVLAGMLALGEQLPSAPTARFSLLLGWLFIVVGVILLVSSTWLLRHL--PLR 312

Query: 362 RFLS-GVEKNXXXXXXXXXXXXXXXXXTVIQASTLHHLIS 478
           RF+   V++N                  VI A+TLHHLIS
Sbjct: 313 RFIRINVDRNFSLSRSGSLRLKDSNPTAVIHAATLHHLIS 352


>ref|XP_002873540.1| hypothetical protein ARALYDRAFT_909170 [Arabidopsis lyrata subsp.
           lyrata] gi|297319377|gb|EFH49799.1| hypothetical protein
           ARALYDRAFT_909170 [Arabidopsis lyrata subsp. lyrata]
          Length = 344

 Score =  177 bits (448), Expect = 3e-42
 Identities = 93/160 (58%), Positives = 110/160 (68%), Gaps = 1/160 (0%)
 Frame = +2

Query: 2   GILFGMASVISKMGFVFLEQGFSKMLVPICISLSICCSGTGFVYQTRGLKHGRAIVVSTC 181
           GILFGMASV+SKMGFVF+EQGFS M +P+CIS+SICCSGTGF YQTRGLKHGRAIVVSTC
Sbjct: 178 GILFGMASVVSKMGFVFVEQGFSAMFIPMCISISICCSGTGFFYQTRGLKHGRAIVVSTC 237

Query: 182 AAVASIVTGVLAGMLALGEQLPSSPVGRFXXXXXXXXXXXXXXXXXXXARLLQHLPRPVK 361
           AAVASIVTGV+AGM ALGE+LP+SP GR                    +RL++HLPR  +
Sbjct: 238 AAVASIVTGVVAGMFALGEKLPTSPSGRLLLLLGWLLIMLGVVLLVTSSRLIRHLPRSFR 297

Query: 362 RF-LSGVEKNXXXXXXXXXXXXXXXXXTVIQASTLHHLIS 478
           R   + +E+                   VIQA+TLHHL+S
Sbjct: 298 RSRQTSLERGFNIRRTPSHTPKDTNPSAVIQAATLHHLLS 337


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