BLASTX nr result

ID: Coptis21_contig00021696 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021696
         (779 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326129.1| predicted protein [Populus trichocarpa] gi|2...   219   4e-55
ref|XP_002278209.1| PREDICTED: protein LURP-one-related 6 [Vitis...   217   3e-54
ref|XP_002516264.1| conserved hypothetical protein [Ricinus comm...   212   8e-53
ref|XP_003534948.1| PREDICTED: protein LURP-one-related 6-like [...   211   1e-52
ref|XP_003546511.1| PREDICTED: protein LURP-one-related 6-like [...   208   9e-52

>ref|XP_002326129.1| predicted protein [Populus trichocarpa] gi|222833322|gb|EEE71799.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score =  219 bits (559), Expect = 4e-55
 Identities = 105/170 (61%), Positives = 137/170 (80%), Gaps = 3/170 (1%)
 Frame = +3

Query: 3   VVTNYSQNVAFRVDGCGTLGVEGEAILKNSDGESLLVIRRKGGLVQALSINRQWRGYKIN 182
           VVT+ SQ V FRVDGCG  G EGE IL++S GE+LL+IRRKGG+VQALSI+R+W+GY  +
Sbjct: 41  VVTDCSQKVVFRVDGCGVSGSEGELILRDSSGEALLLIRRKGGMVQALSIHRKWKGYTFD 100

Query: 183 YEGVEKLVFSLKEP-VVCIIKKIPIRIKVEPGKNN--WDFEVKGSFPDRACTIIDSEGNI 353
           YEG +KLVFSLKEP   C+++K  IR+  EP ++N  WDFE+KG FPDR+C+I+DS GNI
Sbjct: 101 YEGSQKLVFSLKEPNFSCLVRKNAIRVSTEPRRSNKDWDFEIKGYFPDRSCSIVDSLGNI 160

Query: 354 VAQVGVYNDLEEMILCKDLYHVVVQPGCDQAFVFGVIAILDNIHGETTVC 503
           VAQ+G+  + ++++  KDLYHVVV+PG DQ F FGVIA+LD I+GE+T C
Sbjct: 161 VAQIGINKEEDQLMANKDLYHVVVRPGIDQVFTFGVIAVLDYIYGESTRC 210


>ref|XP_002278209.1| PREDICTED: protein LURP-one-related 6 [Vitis vinifera]
           gi|147777894|emb|CAN71378.1| hypothetical protein
           VITISV_001493 [Vitis vinifera]
           gi|297738553|emb|CBI27798.3| unnamed protein product
           [Vitis vinifera]
          Length = 208

 Score =  217 bits (552), Expect = 3e-54
 Identities = 105/170 (61%), Positives = 135/170 (79%), Gaps = 3/170 (1%)
 Frame = +3

Query: 3   VVTNYSQNVAFRVDGCGTLGVEGEAILKNSDGESLLVIRRKGGLVQALSINRQWRGYKIN 182
           VVT+ SQ V F+VDGCG LG +GE I+++ DG +LL+IRRKGG+VQALSI+ QW+GY  +
Sbjct: 39  VVTDSSQTVVFKVDGCGVLGTKGELIVRDGDGGALLLIRRKGGVVQALSIHGQWKGYSFD 98

Query: 183 YEGVEKLVFSLKEPVVCIIKK-IPIRIKVEP--GKNNWDFEVKGSFPDRACTIIDSEGNI 353
           YEG++KLVFSLKEP  C+ +  I IR  +E   G  NWDFE+ G FPDR C+I+DS+GNI
Sbjct: 99  YEGLQKLVFSLKEPKSCLARNNITIRTSIEHNRGHKNWDFEINGYFPDRDCSIVDSKGNI 158

Query: 354 VAQVGVYNDLEEMILCKDLYHVVVQPGCDQAFVFGVIAILDNIHGETTVC 503
           VAQVGV  +++E +  KDLYHVV++PG DQAFVFGVIA+LD I+GE+T C
Sbjct: 159 VAQVGVKKEVDEFMGSKDLYHVVIKPGIDQAFVFGVIAVLDYIYGESTRC 208


>ref|XP_002516264.1| conserved hypothetical protein [Ricinus communis]
           gi|223544750|gb|EEF46266.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 208

 Score =  212 bits (539), Expect = 8e-53
 Identities = 100/170 (58%), Positives = 135/170 (79%), Gaps = 3/170 (1%)
 Frame = +3

Query: 3   VVTNYSQNVAFRVDGCGTLGVEGEAILKNSDGESLLVIRRKGGLVQALSINRQWRGYKIN 182
           VVT+ SQ V FRVDGCG LG +GE I+++SDGE LL++RRKGG+VQALSI+R+W+G+  +
Sbjct: 39  VVTDCSQKVVFRVDGCGVLGKQGELIVRDSDGEPLLLVRRKGGMVQALSIHRKWKGFTFD 98

Query: 183 YEGVEKLVFSLKEPV-VCIIKKIPIRIKVEPGKNN--WDFEVKGSFPDRACTIIDSEGNI 353
           YEG +KLVFSLKEP   C+++   IR+  EP ++N  WDFE++G FPDR C I+D  GNI
Sbjct: 99  YEGSQKLVFSLKEPKDSCLLRNNAIRVSTEPRRSNKDWDFEIRGCFPDRDCRIVDYFGNI 158

Query: 354 VAQVGVYNDLEEMILCKDLYHVVVQPGCDQAFVFGVIAILDNIHGETTVC 503
           +AQ+GV  ++ E++  KDLYHVVV+ G DQAFVFG+I++LD I+GE+T C
Sbjct: 159 IAQIGVKKEVNEVMRSKDLYHVVVKSGIDQAFVFGIISVLDYIYGESTRC 208


>ref|XP_003534948.1| PREDICTED: protein LURP-one-related 6-like [Glycine max]
          Length = 203

 Score =  211 bits (537), Expect = 1e-52
 Identities = 101/172 (58%), Positives = 136/172 (79%), Gaps = 5/172 (2%)
 Frame = +3

Query: 3   VVTNYS-QNVAFRVDGCGTLGVEGEAILKNSDGESLLVIRRKGGLVQALSINRQWRGYKI 179
           VVT+ S Q V FRVDGCG  G +G+ IL++ +G++LL++RRKGG+V+ALSI ++W GY +
Sbjct: 32  VVTDCSGQRVVFRVDGCGIHGTKGQLILRDGEGDALLLMRRKGGMVEALSIYKKWNGYSV 91

Query: 180 NYEGVEKLVFSLKEP-VVCIIKKIPIRIKVEP---GKNNWDFEVKGSFPDRACTIIDSEG 347
           NYEG++ LVFSLKEP   C+++   IRI +EP       WDFEV+G FPDR+C+I+D  G
Sbjct: 92  NYEGLQSLVFSLKEPNSCCLVRNNAIRISIEPRNASNKGWDFEVRGYFPDRSCSIVDVRG 151

Query: 348 NIVAQVGVYNDLEEMILCKDLYHVVVQPGCDQAFVFGVIAILDNIHGETTVC 503
           N++AQVGV  ++E+++  KDLYHVVV+PG DQAFVFGVIAILDNI+GE+T C
Sbjct: 152 NVIAQVGVNKEVEKLMESKDLYHVVVKPGIDQAFVFGVIAILDNIYGESTHC 203


>ref|XP_003546511.1| PREDICTED: protein LURP-one-related 6-like [Glycine max]
          Length = 211

 Score =  208 bits (530), Expect = 9e-52
 Identities = 101/176 (57%), Positives = 138/176 (78%), Gaps = 5/176 (2%)
 Frame = +3

Query: 3   VVTNYS-QNVAFRVDGCGTLGVEGEAILKNSDGESLLVIRRKGGLVQALSINRQWRGYKI 179
           VVT+ S Q V FRVDGCG    +G+ IL++ +G++LL++RRKGG+V+AL I ++W GY +
Sbjct: 34  VVTDCSGQRVVFRVDGCGIHDTKGQLILRDGEGDALLLMRRKGGMVEALGIYKKWNGYSV 93

Query: 180 NYEGVEKLVFSLKEPV-VCIIKKIPIRIKVEPGKNN---WDFEVKGSFPDRACTIIDSEG 347
           NYEG++ LVFSLKEP   C++K   IRI +EP  ++   WDFEV+G FPDR+C+I+D  G
Sbjct: 94  NYEGLQSLVFSLKEPNNCCLVKNNAIRISIEPRNSSNKGWDFEVRGYFPDRSCSIVDVRG 153

Query: 348 NIVAQVGVYNDLEEMILCKDLYHVVVQPGCDQAFVFGVIAILDNIHGETTVC*LQN 515
           N++AQVGV  ++E+++  KDLYHVVV+PG DQAFVFGVIAILD I+GE+T C +QN
Sbjct: 154 NVIAQVGVNKEVEKLMESKDLYHVVVKPGIDQAFVFGVIAILDYIYGESTYCRVQN 209


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