BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021672
         (1281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632309.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   554   e-155
ref|XP_002307595.1| f-box family protein [Populus trichocarpa] g...   550   e-154
ref|XP_002524761.1| Protein AFR, putative [Ricinus communis] gi|...   549   e-154
ref|XP_002300832.1| f-box family protein [Populus trichocarpa] g...   546   e-153
ref|XP_003536597.1| PREDICTED: F-box/kelch-repeat protein SKIP30...   546   e-153

>ref|XP_003632309.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like isoform 1 [Vitis
            vinifera] gi|359479635|ref|XP_003632310.1| PREDICTED:
            F-box/kelch-repeat protein SKIP30-like isoform 2 [Vitis
            vinifera] gi|359479637|ref|XP_003632311.1| PREDICTED:
            F-box/kelch-repeat protein SKIP30-like isoform 3 [Vitis
            vinifera]
          Length = 345

 Score =  554 bits (1428), Expect = e-155
 Identities = 261/347 (75%), Positives = 301/347 (86%)
 Frame = +3

Query: 54   MSGLIEGLPDAVALRCLARVPLYLHPNLQLVCRSWRGALHSREFFRARREVGASEDLLCV 233
            MSGLIEGLPDAVALRCLA VP YLHP L+LV RSWR A+   E F+AR+EVG+SEDLLCV
Sbjct: 1    MSGLIEGLPDAVALRCLAWVPFYLHPRLELVSRSWRDAIRGPELFKARQEVGSSEDLLCV 60

Query: 234  CAFEPENLWQLYDPRRDLWMTVPVLPSDIRHLANFGAVSTAGKLFVLGGGSDAVDPLTGD 413
            CAF+PENLWQLYDPR+DLW+++PVLPS IRHLA+FGAVSTAGKLFVLGGGSDAVDPLTGD
Sbjct: 61   CAFDPENLWQLYDPRKDLWISLPVLPSRIRHLAHFGAVSTAGKLFVLGGGSDAVDPLTGD 120

Query: 414  HYGIFASNEVWSYDPLLRKWARRASMLVPRAMFACCVLDGKIVVAGGFTTCRKSISKAEA 593
              G FA+NEVWSYDP++R+WA RA MLVPRAMFACCVLDGKIVVAGGFT+CRKSIS+AE 
Sbjct: 121  QDGSFATNEVWSYDPIIRQWAPRAPMLVPRAMFACCVLDGKIVVAGGFTSCRKSISQAEI 180

Query: 594  YDPEKDVWIAIPDLPHTHNSACSGVLINGKVHVLHKGLSTVQVFENAEWRWVVEDYGWLQ 773
            YDPEKD W++IPDL  THNSACSGV+++GKVHVLHKGL+TVQ+ +     W VEDYGWLQ
Sbjct: 181  YDPEKDAWVSIPDLHRTHNSACSGVVLDGKVHVLHKGLTTVQILDKVGPGWRVEDYGWLQ 240

Query: 774  GPMAVVRGELYVLSHGFIVKQNREQRKRKVLASASDFKSRIGFAMIGLGDNLYVIGGVIG 953
            GPMA+V+G LYV+SHG I KQ RE   +K++ SAS+F+ RIGFAM GL D +YVIGGVIG
Sbjct: 241  GPMAIVQGALYVMSHGIIFKQERE--VKKMVVSASEFRRRIGFAMTGLRDEIYVIGGVIG 298

Query: 954  PGRWNLDIKPLSLVDVLTVGSERPTWRMVTPMTECHGSVLGCTMLRI 1094
            P RWN DIKPLS VDVLT+GSERP WR V+PM++C G++ GCT LRI
Sbjct: 299  PDRWNWDIKPLSDVDVLTIGSERPAWRQVSPMSQCRGTIFGCTQLRI 345


>ref|XP_002307595.1| f-box family protein [Populus trichocarpa]
            gi|118482816|gb|ABK93324.1| unknown [Populus trichocarpa]
            gi|222857044|gb|EEE94591.1| f-box family protein [Populus
            trichocarpa]
          Length = 345

 Score =  550 bits (1416), Expect = e-154
 Identities = 260/347 (74%), Positives = 297/347 (85%)
 Frame = +3

Query: 54   MSGLIEGLPDAVALRCLARVPLYLHPNLQLVCRSWRGALHSREFFRARREVGASEDLLCV 233
            MS LIEGLPDAVA+RC+ARVP YLHP L+LV RSWR  + S E F+AR+EVG++EDLLCV
Sbjct: 1    MSELIEGLPDAVAIRCIARVPFYLHPKLELVSRSWRAVVRSPELFKARQEVGSAEDLLCV 60

Query: 234  CAFEPENLWQLYDPRRDLWMTVPVLPSDIRHLANFGAVSTAGKLFVLGGGSDAVDPLTGD 413
            CAF+PENLWQLYDP RDLW+T+PVLPS IRHLA+FG VS+AGKLFVLGGGSDAVDPLTGD
Sbjct: 61   CAFDPENLWQLYDPHRDLWITLPVLPSKIRHLAHFGVVSSAGKLFVLGGGSDAVDPLTGD 120

Query: 414  HYGIFASNEVWSYDPLLRKWARRASMLVPRAMFACCVLDGKIVVAGGFTTCRKSISKAEA 593
              G FA+NEVWSYDP+LR+WA RASMLVPRAMFAC  L+GKIVVAGGFT+CRKSIS+AE 
Sbjct: 121  QDGSFATNEVWSYDPVLRQWAARASMLVPRAMFACGTLNGKIVVAGGFTSCRKSISQAEM 180

Query: 594  YDPEKDVWIAIPDLPHTHNSACSGVLINGKVHVLHKGLSTVQVFENAEWRWVVEDYGWLQ 773
            YDPEKDVWI IPDL  THNS CSGV+I GK+HVLH+GLSTVQV +N    W VEDYGWLQ
Sbjct: 181  YDPEKDVWIPIPDLHRTHNSTCSGVVIGGKLHVLHRGLSTVQVLDNVGSGWTVEDYGWLQ 240

Query: 774  GPMAVVRGELYVLSHGFIVKQNREQRKRKVLASASDFKSRIGFAMIGLGDNLYVIGGVIG 953
            GPMAVV   LYV+SHG I KQ  E + RKV+ SAS+F+ RIGFAM+GLGD++YVIGGVIG
Sbjct: 241  GPMAVVHDALYVMSHGLIFKQ--EGKTRKVVVSASEFRKRIGFAMMGLGDDIYVIGGVIG 298

Query: 954  PGRWNLDIKPLSLVDVLTVGSERPTWRMVTPMTECHGSVLGCTMLRI 1094
            P RWN DI+P+S VD+LTVG +RPTWR  TPMT C G++LGCT LRI
Sbjct: 299  PDRWNWDIRPMSDVDILTVGGDRPTWRQATPMTRCRGTILGCTQLRI 345


>ref|XP_002524761.1| Protein AFR, putative [Ricinus communis] gi|223535945|gb|EEF37604.1|
            Protein AFR, putative [Ricinus communis]
          Length = 345

 Score =  549 bits (1414), Expect = e-154
 Identities = 259/347 (74%), Positives = 294/347 (84%)
 Frame = +3

Query: 54   MSGLIEGLPDAVALRCLARVPLYLHPNLQLVCRSWRGALHSREFFRARREVGASEDLLCV 233
            MS LIEGLPDA+A+RC+ARVP YLHP L+LV  SWR A+ S E F+AR+EVG++EDLLCV
Sbjct: 1    MSELIEGLPDAIAIRCIARVPFYLHPKLELVSHSWRSAIRSPELFKARQEVGSAEDLLCV 60

Query: 234  CAFEPENLWQLYDPRRDLWMTVPVLPSDIRHLANFGAVSTAGKLFVLGGGSDAVDPLTGD 413
            CAFEPENLWQLYDP RDLW+T+PVLPS IRHLA+FG VSTAGKL+VLGGGSDAVDPLTGD
Sbjct: 61   CAFEPENLWQLYDPLRDLWITLPVLPSKIRHLAHFGVVSTAGKLYVLGGGSDAVDPLTGD 120

Query: 414  HYGIFASNEVWSYDPLLRKWARRASMLVPRAMFACCVLDGKIVVAGGFTTCRKSISKAEA 593
              G FA+NEVWSYDP++R+WA RASMLVPRAMFACCVL GKIVVAGGFT+CRKSIS+AE 
Sbjct: 121  QDGNFATNEVWSYDPVIRQWALRASMLVPRAMFACCVLKGKIVVAGGFTSCRKSISQAEM 180

Query: 594  YDPEKDVWIAIPDLPHTHNSACSGVLINGKVHVLHKGLSTVQVFENAEWRWVVEDYGWLQ 773
            YDPEKDVWI IPDL  THNSACSG++I GKVH+LHKGLS VQV +N    W VEDY WLQ
Sbjct: 181  YDPEKDVWIPIPDLHRTHNSACSGIVIGGKVHILHKGLSAVQVLDNVGAGWTVEDYNWLQ 240

Query: 774  GPMAVVRGELYVLSHGFIVKQNREQRKRKVLASASDFKSRIGFAMIGLGDNLYVIGGVIG 953
            GPMAVV G LYV+SHG I KQ  E + RKV+ SAS+F+ RIGFAM GLGD++YVIGGVIG
Sbjct: 241  GPMAVVHGALYVMSHGLICKQ--EGKVRKVVVSASEFRRRIGFAMTGLGDDIYVIGGVIG 298

Query: 954  PGRWNLDIKPLSLVDVLTVGSERPTWRMVTPMTECHGSVLGCTMLRI 1094
            P RWN DIKP+S VD+L VG ERPTWR   PM+ C G++LGC  LRI
Sbjct: 299  PDRWNWDIKPMSDVDILAVGGERPTWRQAAPMSRCRGTILGCAQLRI 345


>ref|XP_002300832.1| f-box family protein [Populus trichocarpa]
            gi|222842558|gb|EEE80105.1| f-box family protein [Populus
            trichocarpa]
          Length = 345

 Score =  546 bits (1407), Expect = e-153
 Identities = 257/347 (74%), Positives = 296/347 (85%)
 Frame = +3

Query: 54   MSGLIEGLPDAVALRCLARVPLYLHPNLQLVCRSWRGALHSREFFRARREVGASEDLLCV 233
            MS LIEGLPDAVA+RC+ARVP YLHP L++V RSW+ A+ S E F+AR+EVG++EDLLCV
Sbjct: 1    MSELIEGLPDAVAIRCIARVPFYLHPKLEVVSRSWQAAVRSTELFKARQEVGSAEDLLCV 60

Query: 234  CAFEPENLWQLYDPRRDLWMTVPVLPSDIRHLANFGAVSTAGKLFVLGGGSDAVDPLTGD 413
            CAF+PENLWQLYDP RDLW+T+P+LPS IRHLA+FG V +AGKLFVLGGGSDAVDPLTGD
Sbjct: 61   CAFDPENLWQLYDPLRDLWITLPILPSKIRHLAHFGVVCSAGKLFVLGGGSDAVDPLTGD 120

Query: 414  HYGIFASNEVWSYDPLLRKWARRASMLVPRAMFACCVLDGKIVVAGGFTTCRKSISKAEA 593
              G FA+NEVWSYDP+LR+WA RASMLVPRAMFACC L+GKIVVAGGFT+C+KSIS+AE 
Sbjct: 121  QDGSFATNEVWSYDPVLREWAARASMLVPRAMFACCALNGKIVVAGGFTSCQKSISQAEM 180

Query: 594  YDPEKDVWIAIPDLPHTHNSACSGVLINGKVHVLHKGLSTVQVFENAEWRWVVEDYGWLQ 773
            YDPEKDVW+ IPDL  THNSACSGV+I GK+HVLH+GLSTVQV ++    W VEDYGWLQ
Sbjct: 181  YDPEKDVWVPIPDLHRTHNSACSGVVIGGKLHVLHRGLSTVQVLDSIGSGWTVEDYGWLQ 240

Query: 774  GPMAVVRGELYVLSHGFIVKQNREQRKRKVLASASDFKSRIGFAMIGLGDNLYVIGGVIG 953
            GPMAVV   LYV+SHG IVKQ  E + RKV+ SAS+F+ RIGFAM GLGD +YVIGGVIG
Sbjct: 241  GPMAVVHDALYVMSHGLIVKQ--EGKTRKVVVSASEFRKRIGFAMTGLGDEMYVIGGVIG 298

Query: 954  PGRWNLDIKPLSLVDVLTVGSERPTWRMVTPMTECHGSVLGCTMLRI 1094
            P RWN DIKP+S VD+LTVG ERPTWR  TPMT C G++ GC  LRI
Sbjct: 299  PDRWNWDIKPVSDVDILTVGGERPTWRQATPMTRCRGTIRGCAQLRI 345


>ref|XP_003536597.1| PREDICTED: F-box/kelch-repeat protein SKIP30-like isoform 1 [Glycine
            max] gi|356536141|ref|XP_003536598.1| PREDICTED:
            F-box/kelch-repeat protein SKIP30-like isoform 2 [Glycine
            max] gi|356536143|ref|XP_003536599.1| PREDICTED:
            F-box/kelch-repeat protein SKIP30-like isoform 3 [Glycine
            max]
          Length = 344

 Score =  546 bits (1406), Expect = e-153
 Identities = 258/347 (74%), Positives = 301/347 (86%)
 Frame = +3

Query: 54   MSGLIEGLPDAVALRCLARVPLYLHPNLQLVCRSWRGALHSREFFRARREVGASEDLLCV 233
            MSGLIEGLPDAVA+RCLA VP YLHP L+LV R+WR  +   E F+AR+E+G+SEDLLCV
Sbjct: 1    MSGLIEGLPDAVAIRCLAWVPFYLHPKLELVSRAWRAVVRGPELFKARQELGSSEDLLCV 60

Query: 234  CAFEPENLWQLYDPRRDLWMTVPVLPSDIRHLANFGAVSTAGKLFVLGGGSDAVDPLTGD 413
            CAFEPENLWQLYDP+RDLW+T+PVLPS IRHL++FGAVSTAGKLFV+GGGSDAVDPLTGD
Sbjct: 61   CAFEPENLWQLYDPQRDLWITLPVLPSRIRHLSHFGAVSTAGKLFVIGGGSDAVDPLTGD 120

Query: 414  HYGIFASNEVWSYDPLLRKWARRASMLVPRAMFACCVLDGKIVVAGGFTTCRKSISKAEA 593
              G FA+NEVWSYDP++R+W+ RA+MLVPR+MFACCV++GKIVVAGGFT+CRKSIS+AE 
Sbjct: 121  QDGCFATNEVWSYDPVVRQWSPRAAMLVPRSMFACCVMNGKIVVAGGFTSCRKSISQAEI 180

Query: 594  YDPEKDVWIAIPDLPHTHNSACSGVLINGKVHVLHKGLSTVQVFENAEWRWVVEDYGWLQ 773
            YDPEKDVWI +PDL  THNSACSGV+I GKVHVLHK +STVQV +NA  +W VE+YGWL 
Sbjct: 181  YDPEKDVWIPMPDLHRTHNSACSGVVIGGKVHVLHKDMSTVQVLDNA-GQWTVEEYGWLH 239

Query: 774  GPMAVVRGELYVLSHGFIVKQNREQRKRKVLASASDFKSRIGFAMIGLGDNLYVIGGVIG 953
            G MAV+R  LYV+SHG I+KQ  +++ RKV+ SAS+F+ RIGFAMIGLGD LYVIGGVIG
Sbjct: 240  GQMAVIRDALYVISHGLIIKQ--DKKMRKVVGSASEFRRRIGFAMIGLGDELYVIGGVIG 297

Query: 954  PGRWNLDIKPLSLVDVLTVGSERPTWRMVTPMTECHGSVLGCTMLRI 1094
            P RWN DIKPLS VDVLT+ SERPTWR   PMT C G++LGCT LRI
Sbjct: 298  PDRWNWDIKPLSDVDVLTLASERPTWRQAAPMTRCGGTILGCTQLRI 344