BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021649
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004159559.1| PREDICTED: F-box protein SKIP14-like [Cucumi...    75   7e-12
ref|XP_004142948.1| PREDICTED: F-box protein SKIP14-like [Cucumi...    74   2e-11
ref|XP_002514971.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
ref|XP_002315636.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10
ref|XP_004135509.1| PREDICTED: F-box protein SKIP14-like [Cucumi...    67   2e-09

>ref|XP_004159559.1| PREDICTED: F-box protein SKIP14-like [Cucumis sativus]
          Length = 491

 Score = 75.1 bits (183), Expect = 7e-12
 Identities = 50/125 (40%), Positives = 66/125 (52%), Gaps = 6/125 (4%)
 Frame = +1

Query: 79  MTLNFSHRTLFPVNSSSEDSFVKDWCCA----FEGIPEKNAVSGFSGYGKHQPFDWDFLN 246
           M LNFS R L P++ S ED+ V     A     EGIPE NA      + + Q  D     
Sbjct: 1   MALNFSCRPLIPLHLS-EDNLVSPMRIANGYIVEGIPENNAEGCRKPWHRGQEVD----- 54

Query: 247 SLDCWKDGADNAAPV--ESVTTDIVERLPSDPFGMGIGATFTAITGWVDDFDPDEFNMFM 420
             DC+  G D+ +    + V+ DI+  LP+DPFGM I  TFTAITGW++D + D    F 
Sbjct: 55  --DCFDHGKDSCSDSSQDPVSKDILHILPADPFGMDISTTFTAITGWLEDMEVDYDECFS 112

Query: 421 NKTLT 435
           N+  T
Sbjct: 113 NRAGT 117


>ref|XP_004142948.1| PREDICTED: F-box protein SKIP14-like [Cucumis sativus]
          Length = 497

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 49/125 (39%), Positives = 66/125 (52%), Gaps = 6/125 (4%)
 Frame = +1

Query: 79  MTLNFSHRTLFPVNSSSEDSFVKDWCCA----FEGIPEKNAVSGFSGYGKHQPFDWDFLN 246
           M LNFS R L P++ S ED+ V     A     EGIPE NA      + + +  D     
Sbjct: 1   MALNFSCRPLIPLHLS-EDNLVSPMRIANGYIVEGIPENNAEGCRKPWHRGREVD----- 54

Query: 247 SLDCWKDGADNAAPV--ESVTTDIVERLPSDPFGMGIGATFTAITGWVDDFDPDEFNMFM 420
             DC+  G D+ +    + V+ DI+  LP+DPFGM I  TFTAITGW++D + D    F 
Sbjct: 55  --DCFDHGKDSCSDSSQDPVSKDILHILPADPFGMDISTTFTAITGWLEDMEVDYDECFS 112

Query: 421 NKTLT 435
           N+  T
Sbjct: 113 NRAGT 117


>ref|XP_002514971.1| conserved hypothetical protein [Ricinus communis]
           gi|223546022|gb|EEF47525.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 483

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 45/114 (39%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
 Frame = +1

Query: 79  MTLNFSHRTLFPVNSSSEDSFVKDWCCAFEGIPEKNAVSGF---SGYGKHQPFDWDFLNS 249
           M LNFSHRTLFP +                 +PE N V+     +GY      +    N 
Sbjct: 1   MALNFSHRTLFPGH-----------------LPEDNLVTPMRLANGYLVEDKVE----NC 39

Query: 250 LDCWKDGADNAAPV---ESVTTDIVERLPSDPFGMGIGATFTAITGWVDDFDPD 402
            D  +D +D   P    ESV  DI++ LPSDPFGM I  TFTA+TGW++D + D
Sbjct: 40  FDYGRDRSDRCGPCGSQESVHKDILDLLPSDPFGMDISTTFTALTGWLEDLEMD 93


>ref|XP_002315636.1| predicted protein [Populus trichocarpa] gi|222864676|gb|EEF01807.1|
           predicted protein [Populus trichocarpa]
          Length = 449

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 42/108 (38%), Positives = 53/108 (49%)
 Frame = +1

Query: 79  MTLNFSHRTLFPVNSSSEDSFVKDWCCAFEGIPEKNAVSGFSGYGKHQPFDWDFLNSLDC 258
           M LNFSHR LFP    SED+ V     + +   E                        DC
Sbjct: 1   MALNFSHRPLFP--RLSEDNLVSPMRISIQEKVE------------------------DC 34

Query: 259 WKDGADNAAPVESVTTDIVERLPSDPFGMGIGATFTAITGWVDDFDPD 402
           +  G D +   ESV  DI++ LPSDPFGM I  TFTA+TGW++D + D
Sbjct: 35  FDYGRDRSGSQESVHKDILDLLPSDPFGMDISTTFTAVTGWLEDLEVD 82


>ref|XP_004135509.1| PREDICTED: F-box protein SKIP14-like [Cucumis sativus]
          Length = 767

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 36/108 (33%), Positives = 58/108 (53%)
 Frame = +1

Query: 79  MTLNFSHRTLFPVNSSSEDSFVKDWCCAFEGIPEKNAVSGFSGYGKHQPFDWDFLNSLDC 258
           M LNFSHR +FP +  +E++ V     +   + +  +   F  YG     + + ++ L+ 
Sbjct: 1   MALNFSHRPIFP-SHLTEENLVSSMNISSGFVVDDVSERNFDVYGTSWLINRELVDCLNF 59

Query: 259 WKDGADNAAPVESVTTDIVERLPSDPFGMGIGATFTAITGWVDDFDPD 402
            +D  +     + V  D+++ LPSDPF M I  T TAITGW+DD + D
Sbjct: 60  LEDTCEGGGTRDCVPGDVLDLLPSDPFDMDISTTVTAITGWLDDLNVD 107