BLASTX nr result

ID: Coptis21_contig00021624 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021624
         (732 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297853.1| predicted protein [Populus trichocarpa] gi|2...   136   4e-30
gb|ABK93232.1| unknown [Populus trichocarpa]                          136   5e-30
ref|XP_002321717.1| predicted protein [Populus trichocarpa] gi|2...   135   1e-29
ref|XP_002318145.1| predicted protein [Populus trichocarpa] gi|2...   128   1e-27
ref|XP_002514878.1| conserved hypothetical protein [Ricinus comm...   122   1e-25

>ref|XP_002297853.1| predicted protein [Populus trichocarpa] gi|222845111|gb|EEE82658.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  136 bits (343), Expect = 4e-30
 Identities = 89/222 (40%), Positives = 124/222 (55%), Gaps = 3/222 (1%)
 Frame = -3

Query: 679 MDPI-KIEKLQAMNKYKKSSTQFLKALILYCSTALICSLLCLSPFWLPSLYASIKAFLFV 503
           MD I K +K+QAM+ +K    QF   L+ +   AL CSLLC SP W PSL +S+K FLF+
Sbjct: 1   MDSIRKAKKIQAMHSFKN---QFYYNLMFHSFLALTCSLLCSSPLWFPSLCSSMKHFLFL 57

Query: 502 SVPNFGVLFINPKCLFIVSNVIVIFLIGESKFLSSKSSPATEIYDEYVKRSSSLRRRPCS 323
           S+PN    +  PKCLFI+ NVIV+FL+GES+ + S+SSP   IYD+YV+RS SLR     
Sbjct: 58  SLPNKLSSYFGPKCLFILVNVIVVFLVGESRLVGSQSSPVGGIYDDYVERSRSLRGVSTH 117

Query: 322 EEIEVKETKLEVCLVEEN--ENKVIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 149
           ++ + +++K E+   ++   ++K +                                   
Sbjct: 118 QD-KAEDSKPEIDQDQQTNIQDKEVVVKAEDDKEVTELTNEGDKDVHEEAGVEDDQHEEK 176

Query: 148 XXXXXELVGLPTEELNRKVEDFIAKINNQRKLEARQLLVCSK 23
                E  GLP EELNR+VE+FIA++N QR LE  Q LVC K
Sbjct: 177 DIIEEEDSGLPPEELNRRVEEFIARVNKQRWLEG-QFLVCCK 217


>gb|ABK93232.1| unknown [Populus trichocarpa]
          Length = 203

 Score =  136 bits (342), Expect = 5e-30
 Identities = 85/218 (38%), Positives = 116/218 (53%), Gaps = 1/218 (0%)
 Frame = -3

Query: 679 MDPIKIEKLQAMNKYKKSSTQFLKALILYCSTALICSLLCLSPFWLPSLYASIKAFLFVS 500
           MD IK+ ++ A+NK KK   Q L    LY  T L C+L C SPFW PSL+ S+K FLFVS
Sbjct: 1   MDLIKLREIHAINKSKKH--QLLDNFFLYSFTVLSCTLFCSSPFWFPSLFHSMKLFLFVS 58

Query: 499 VPNFGVLFINPKCLFIVSNVIVIFLIGESKFLSSKSSPATEI-YDEYVKRSSSLRRRPCS 323
           +P    + ++PK +FIV N+I+  L+GESK+ +S S  AT++ YDEY+ +  SL+    S
Sbjct: 59  LPKLSSILLSPKFIFIVGNLIIFVLVGESKYFTSNSPSATDVYYDEYIDQKKSLQTTSAS 118

Query: 322 EEIEVKETKLEVCLVEENENKVIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 143
            E E KE K+E    +E ++K                                       
Sbjct: 119 VE-EKKEVKMEESF-KEKQSKTCESGENNGGKGLCEGNLKVHKEREDLEGEEE------- 169

Query: 142 XXXELVGLPTEELNRKVEDFIAKINNQRKLEARQLLVC 29
                  LPTEEL ++ +DFIA++N QR LEAR LLVC
Sbjct: 170 -----FSLPTEELKKRADDFIARVNRQRMLEAR-LLVC 201


>ref|XP_002321717.1| predicted protein [Populus trichocarpa] gi|222868713|gb|EEF05844.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  135 bits (339), Expect = 1e-29
 Identities = 85/218 (38%), Positives = 115/218 (52%), Gaps = 1/218 (0%)
 Frame = -3

Query: 679 MDPIKIEKLQAMNKYKKSSTQFLKALILYCSTALICSLLCLSPFWLPSLYASIKAFLFVS 500
           MD IK+ ++ A+NK KK   Q L    LY  T L C+L C SPFW PSL+ S+K FLFVS
Sbjct: 1   MDLIKLREIHAINKSKKH--QLLDNFFLYSFTVLSCTLFCSSPFWFPSLFHSMKLFLFVS 58

Query: 499 VPNFGVLFINPKCLFIVSNVIVIFLIGESKFLSSKSSPATEI-YDEYVKRSSSLRRRPCS 323
           +P    + ++PK +FIV N+I+  L+GESK+ +S S  AT + YDEY+ +  SL+    S
Sbjct: 59  LPKLSSILLSPKFIFIVGNLIIFVLVGESKYFTSNSPSATAVYYDEYIDQKKSLQTTSAS 118

Query: 322 EEIEVKETKLEVCLVEENENKVIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 143
            E E KE K+E    +E ++K                                       
Sbjct: 119 VE-EKKEVKMEESF-KEKQSKTCESGENNGGKGLCEGNLKVHKEREDLEGEEE------- 169

Query: 142 XXXELVGLPTEELNRKVEDFIAKINNQRKLEARQLLVC 29
                  LPTEEL ++ +DFIA++N QR LEAR LLVC
Sbjct: 170 -----FSLPTEELKKRADDFIARVNRQRMLEAR-LLVC 201


>ref|XP_002318145.1| predicted protein [Populus trichocarpa] gi|222858818|gb|EEE96365.1|
           predicted protein [Populus trichocarpa]
          Length = 196

 Score =  128 bits (322), Expect = 1e-27
 Identities = 78/213 (36%), Positives = 109/213 (51%), Gaps = 1/213 (0%)
 Frame = -3

Query: 679 MDPIKIEKLQAMNKYKKSSTQFLKALILYCSTALICSLLCLSPFWLPSLYASIKAFLFVS 500
           MD IK+ +++A+NK KK   Q L    LY    L C+L C SPFW P L+ S+K FLF S
Sbjct: 1   MDLIKLREIRAVNKSKKH--QLLDNFFLYSLIVLACTLFCSSPFWFPCLFDSVKLFLFGS 58

Query: 499 VPNFGVLFINPKCLFIVSNVIVIFLIGESKFLSSKSSPATEI-YDEYVKRSSSLRRRPCS 323
            P  G +F++PK +FIV N+I+  L+GESKF ++ S PAT++ YDEY+    SL+     
Sbjct: 59  PPKLGSVFLSPKFIFIVGNLIIFVLVGESKFFTTNSPPATDVYYDEYIDHKRSLQTASSV 118

Query: 322 EEIEVKETKLEVCLVEENENKVIRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 143
           E  + KET +     E+                                           
Sbjct: 119 E--QKKETNMGKSSKEKRSR--------------TCENGKKNEGKGMAEANLKVHEERKD 162

Query: 142 XXXELVGLPTEELNRKVEDFIAKINNQRKLEAR 44
              + + LPTEELN++ +DFIA++N QR LEAR
Sbjct: 163 LQEDALSLPTEELNKRADDFIARVNRQRMLEAR 195


>ref|XP_002514878.1| conserved hypothetical protein [Ricinus communis]
           gi|223545929|gb|EEF47432.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 268

 Score =  122 bits (305), Expect = 1e-25
 Identities = 66/135 (48%), Positives = 91/135 (67%), Gaps = 3/135 (2%)
 Frame = -3

Query: 667 KIEKLQAMNKYKKSSTQFLKALILYCST--ALICSLLCLSPFWLPSLYASIKAFLFVSVP 494
           K + +QAMN YK   TQFL  LI++  +  AL CS+ C  P+W PSLY+SIK F F+S+P
Sbjct: 6   KAKNIQAMNSYK---TQFLHNLIIHLLSVIALTCSVFCFYPYWFPSLYSSIKEFQFLSLP 62

Query: 493 NFGVLFINPKCLFIVSNVIVIFLIGESKFLSS-KSSPATEIYDEYVKRSSSLRRRPCSEE 317
           N      +PKCLF+V N+IV+FL+GESK + S  SSP  +IYDEYV+RS SLR      +
Sbjct: 63  NTCTSIFSPKCLFVVVNIIVVFLVGESKLVGSHSSSPTNKIYDEYVQRSRSLRGISTLLQ 122

Query: 316 IEVKETKLEVCLVEE 272
            +  ++KL++ L E+
Sbjct: 123 EKAVQSKLDLNLDED 137


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