BLASTX nr result

ID: Coptis21_contig00021602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021602
         (1468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268213.1| PREDICTED: protein CHLOROPLAST IMPORT APPARA...   218   4e-54
emb|CAN72725.1| hypothetical protein VITISV_015092 [Vitis vinifera]   218   4e-54
emb|CBI40095.3| unnamed protein product [Vitis vinifera]              211   3e-52
ref|XP_004149511.1| PREDICTED: protein CHLOROPLAST IMPORT APPARA...   170   8e-40
ref|XP_004173229.1| PREDICTED: protein CHLOROPLAST IMPORT APPARA...   166   1e-38

>ref|XP_002268213.1| PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2-like [Vitis
           vinifera]
          Length = 392

 Score =  218 bits (554), Expect = 4e-54
 Identities = 142/331 (42%), Positives = 178/331 (53%), Gaps = 12/331 (3%)
 Frame = -2

Query: 963 MSSCISGGGRAYGFDIDIVKXXXXXXXXXXXXXXXXXXXXXXXXXXPLALSXXXXXXXXX 784
           MSSC+SG GR YGF+++IVK                           +A+S         
Sbjct: 1   MSSCLSGAGRTYGFELEIVKSPSSTSPRTSHSSSPSSTISESSNSP-IAISTRKPRTPRK 59

Query: 783 XPNQTYNEAAALLSTVYPNIFSPKNLKKPNKHTKPYSSFSSEFAELLPPSPTFNNVEFLL 604
            PNQTYNEAAALLST YPNIFS KNLK P K TK + SF  + +ELL P   F+   FLL
Sbjct: 60  RPNQTYNEAAALLSTAYPNIFSTKNLKNPCKFTKSHDSFLEDSSELLFPFRAFDASGFLL 119

Query: 603 HQPNLEKPTLRIEMKTSTNSSEKLCQNS-----PPISP--CEETYEEDFDADSILDEEVE 445
           HQP  EKP+ ++  K   N  EK CQ+S     P  SP  C + +EEDFDA+SILDEE+E
Sbjct: 120 HQPVQEKPSFQMLPKV-VNCCEKPCQSSVESEFPGKSPELC-DGFEEDFDAESILDEEIE 177

Query: 444 EGIDSIMGNLSVENDCNNSQ-----FSPYFWDPMAMGGGCSMGGKFDFGYGINGSVSAWR 280
            GIDSIMGNLSV+N+ ++       F+ Y+ + + MG G   GGKF+FG+G+   V A R
Sbjct: 178 GGIDSIMGNLSVDNEMSDEATNPVCFNSYYGNGIPMGLG--FGGKFEFGFGMRRGVRALR 235

Query: 279 QTDDVDWWRFPTVDVLAISPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTXXXXXXX 100
             D+ DWWRFPTVD+L ISP                               +        
Sbjct: 236 HVDEGDWWRFPTVDILEISP------------KFNKVSAEKKKKKVEKAQELRSWESPKG 283

Query: 99  XXXXXXXXNLGLKLDYEKVLNAWSDRGSPFS 7
                   +L LKL+Y+ VL+AWSDRGSPFS
Sbjct: 284 NSIPKSNSSLLLKLNYDDVLSAWSDRGSPFS 314


>emb|CAN72725.1| hypothetical protein VITISV_015092 [Vitis vinifera]
          Length = 392

 Score =  218 bits (554), Expect = 4e-54
 Identities = 144/331 (43%), Positives = 180/331 (54%), Gaps = 12/331 (3%)
 Frame = -2

Query: 963 MSSCISGGGRAYGFDIDIVKXXXXXXXXXXXXXXXXXXXXXXXXXXPLALSXXXXXXXXX 784
           MSSC+SG GR YGF+++IVK                           +A+S         
Sbjct: 1   MSSCLSGAGRTYGFELEIVKXPSSTSPRTSHSSSPSSTISESSNSP-IAISTRKXRTPRK 59

Query: 783 XPNQTYNEAAALLSTVYPNIFSPKNLKKPNKHTKPYSSFSSEFAELLPPSPTFNNVEFLL 604
            PNQTYNEAAALLST YPNIFS KNLK P K TK + SF  + +ELL P   F+   FLL
Sbjct: 60  RPNQTYNEAAALLSTAYPNIFSTKNLKNPCKFTKSHDSFLEDSSELLFPFRAFDASGFLL 119

Query: 603 HQPNLEKPTLRIEMKTSTNSSEKLCQNS-----PPISP--CEETYEEDFDADSILDEEVE 445
           HQP  EKP+ ++  K   N  EK CQ+S     P  SP  C + +EEDFDA+SILDEE+E
Sbjct: 120 HQPVQEKPSFQMLPKV-VNCCEKPCQSSVESEFPGKSPELC-DGFEEDFDAESILDEEIE 177

Query: 444 EGIDSIMGNLSVENDCNNSQ-----FSPYFWDPMAMGGGCSMGGKFDFGYGINGSVSAWR 280
            GIDSIMGNLSV+N+ ++       F+ Y+ + + MG G   GGKF+FG+G+   V A R
Sbjct: 178 GGIDSIMGNLSVDNEMSDEATNPVCFNSYYGNGIPMGLG--FGGKFEFGFGMRRGVRALR 235

Query: 279 QTDDVDWWRFPTVDVLAISPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTXXXXXXX 100
             D+ DWWRFPTVD+L ISP                               +        
Sbjct: 236 HVDEGDWWRFPTVDILEISP------------KFNKVSAEKKKKKVEKAQELRSWESPKG 283

Query: 99  XXXXXXXXNLGLKLDYEKVLNAWSDRGSPFS 7
                   +L LKL+Y+ VL+AWSDRGSPFS
Sbjct: 284 NSIPKSNSSLLLKLNYDDVLSAWSDRGSPFS 314


>emb|CBI40095.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  211 bits (538), Expect = 3e-52
 Identities = 140/338 (41%), Positives = 174/338 (51%), Gaps = 8/338 (2%)
 Frame = -2

Query: 996 FLVESTFNLL---KMSSCISGGGRAYGFDIDIVKXXXXXXXXXXXXXXXXXXXXXXXXXX 826
           F  ESTF +    KMSSC+SG GR YGF+++IVK                          
Sbjct: 12  FPTESTFIIQSHKKMSSCLSGAGRTYGFELEIVKSPSSTSPRTSHSSSPSSTISESSNSP 71

Query: 825 PLALSXXXXXXXXXXPNQTYNEAAALLSTVYPNIFSPKNLKKPNKHTKPYSSFSSEFAEL 646
            +A+S          PNQTYNEAAALLST YPNIFS KNLK P K TK + SF  + +EL
Sbjct: 72  -IAISTRKPRTPRKRPNQTYNEAAALLSTAYPNIFSTKNLKNPCKFTKSHDSFLEDSSEL 130

Query: 645 LPPSPTFNNVEFLLHQPNLEKPTLRIEMKTSTNSSEKLCQNSPPISPCEETYEEDFDADS 466
           L P   F+   FLLHQP  EKP            S +LC          + +EEDFDA+S
Sbjct: 131 LFPFRAFDASGFLLHQPVQEKP----------RKSPELC----------DGFEEDFDAES 170

Query: 465 ILDEEVEEGIDSIMGNLSVENDCNNSQ-----FSPYFWDPMAMGGGCSMGGKFDFGYGIN 301
           ILDEE+E GIDSIMGNLSV+N+ ++       F+ Y+ + + MG G   GGKF+FG+G+ 
Sbjct: 171 ILDEEIEGGIDSIMGNLSVDNEMSDEATNPVCFNSYYGNGIPMGLG--FGGKFEFGFGMR 228

Query: 300 GSVSAWRQTDDVDWWRFPTVDVLAISPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVT 121
             V A R  D+ DWWRFPTVD+L ISP                               + 
Sbjct: 229 RGVRALRHVDEGDWWRFPTVDILEISP------------KFNKVSAEKKKKKVEKAQELR 276

Query: 120 XXXXXXXXXXXXXXXNLGLKLDYEKVLNAWSDRGSPFS 7
                          +L LKL+Y+ VL+AWSDRGSPFS
Sbjct: 277 SWESPKGNSIPKSNSSLLLKLNYDDVLSAWSDRGSPFS 314


>ref|XP_004149511.1| PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucumis
           sativus]
          Length = 430

 Score =  170 bits (431), Expect = 8e-40
 Identities = 116/274 (42%), Positives = 145/274 (52%), Gaps = 27/274 (9%)
 Frame = -2

Query: 960 SSCISGGGRAYGFDIDIVKXXXXXXXXXXXXXXXXXXXXXXXXXXP-LALSXXXXXXXXX 784
           S CISGGGRAY FD++I+K                            LA+S         
Sbjct: 3   SPCISGGGRAYNFDLEILKSPSSSWTRTSQTSSPSSTLSESSNNTTQLAISTRKLRTPRK 62

Query: 783 XPNQTYNEAAALLSTVYPNIFSPKNLKKPNKHTKPYSSFSS---EFAELLPPSPTFNNVE 613
            PNQTYNEA  LLST YPN+FS K+L  P K TK +   SS   E AELL P    ++  
Sbjct: 63  RPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVIDSSG 122

Query: 612 FLLHQPNL-EKPTLRIEMKTSTNSSEKLCQNSPPISPCEETYE---------EDFDADSI 463
           FLLHQP L EKP  +I  K +      L +N P  SP E  ++         EDFDA+SI
Sbjct: 123 FLLHQPLLEEKPNSQIHSKLT-----NLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESI 177

Query: 462 LDEEVEEGIDSIMGNLSVEN---------DCNNSQFSP--YFWDPMAMGGGCSMGGKFDF 316
           LDEE+EEGIDSIMGNLSV+N          C N+   P  + W+P+ +G       KF+ 
Sbjct: 178 LDEEIEEGIDSIMGNLSVDNLEKGNSTQDSCVNANNHPRNWNWNPIGLG----FNQKFES 233

Query: 315 GYGINGSV--SAWRQTDDVDWWRFPTVDVLAISP 220
           G+G    +  +A R  D+ +WWRFPTVDV+ ISP
Sbjct: 234 GFGFRKGIERTAIRGVDNGNWWRFPTVDVIEISP 267


>ref|XP_004173229.1| PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucumis
           sativus]
          Length = 380

 Score =  166 bits (421), Expect = 1e-38
 Identities = 115/274 (41%), Positives = 144/274 (52%), Gaps = 27/274 (9%)
 Frame = -2

Query: 960 SSCISGGGRAYGFDIDIVKXXXXXXXXXXXXXXXXXXXXXXXXXXP-LALSXXXXXXXXX 784
           S CISGGGRAY FD++I+K                            LA+S         
Sbjct: 3   SPCISGGGRAYNFDLEILKSPSSSWTRTSQTSSPSSTLSESSNNTTQLAISTRKLRTPRK 62

Query: 783 XPNQTYNEAAALLSTVYPNIFSPKNLKKPNKHTKPYSSFSS---EFAELLPPSPTFNNVE 613
            PNQTYNEA  LLST YPN+FS K+L  P K TK +   SS   E AELL P    ++  
Sbjct: 63  RPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVIDSSG 122

Query: 612 FLLHQPNL-EKPTLRIEMKTSTNSSEKLCQNSPPISPCEETYE---------EDFDADSI 463
           FLLHQ  L EKP  +I  K +      L +N P  SP E  ++         EDFDA+SI
Sbjct: 123 FLLHQLLLEEKPNSQIHSKLT-----NLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESI 177

Query: 462 LDEEVEEGIDSIMGNLSVEN---------DCNNSQFSP--YFWDPMAMGGGCSMGGKFDF 316
           LDEE+EEGIDSIMGNLSV+N          C N+   P  + W+P+ +G       KF+ 
Sbjct: 178 LDEEIEEGIDSIMGNLSVDNLEKGNSTQDSCVNANNHPRNWNWNPIGLG----FNQKFES 233

Query: 315 GYGINGSV--SAWRQTDDVDWWRFPTVDVLAISP 220
           G+G    +  +A R  D+ +WWRFPTVDV+ ISP
Sbjct: 234 GFGFRKGIERTAIRGVDNGNWWRFPTVDVIEISP 267


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