BLASTX nr result

ID: Coptis21_contig00021597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021597
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311595.1| predicted protein [Populus trichocarpa] gi|2...   182   6e-44
ref|XP_002315799.1| predicted protein [Populus trichocarpa] gi|2...   181   1e-43
ref|XP_002311169.1| predicted protein [Populus trichocarpa] gi|2...   179   4e-43
ref|XP_003519043.1| PREDICTED: LOW QUALITY PROTEIN: protein kina...   178   8e-43
ref|XP_003517946.1| PREDICTED: LOW QUALITY PROTEIN: protein kina...   178   8e-43

>ref|XP_002311595.1| predicted protein [Populus trichocarpa] gi|222851415|gb|EEE88962.1|
           predicted protein [Populus trichocarpa]
          Length = 418

 Score =  182 bits (462), Expect = 6e-44
 Identities = 84/134 (62%), Positives = 106/134 (79%)
 Frame = -1

Query: 403 GQNINTCISSPQIEGGELKSPNLKIFSLRELKAATRSFRPDNILGEGTFGLVYKGWIDQH 224
           G++ + C  +P+ EG  L SPNLK FS  ELK+ATR+FRPD++LGEG FG V+KGWID++
Sbjct: 46  GKSSSDCFPTPRSEGEILSSPNLKAFSFNELKSATRNFRPDSLLGEGGFGCVFKGWIDEN 105

Query: 223 KLTPTKPGTGLAVAVKIHKPESFQGQKEWLTEIYYLGRYYHSNLVRLIGYCTEDGRFLLV 44
            LT +KPG+G+ VAVK  KPE FQG KEWLTE+ YLG+ +H NLV+LIGYC E    LLV
Sbjct: 106 TLTASKPGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCVEGENRLLV 165

Query: 43  YEFVPRGSLDNHLF 2
           YEF+P+GSL+NHLF
Sbjct: 166 YEFMPKGSLENHLF 179


>ref|XP_002315799.1| predicted protein [Populus trichocarpa] gi|222864839|gb|EEF01970.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score =  181 bits (460), Expect = 1e-43
 Identities = 84/128 (65%), Positives = 101/128 (78%)
 Frame = -1

Query: 385 CISSPQIEGGELKSPNLKIFSLRELKAATRSFRPDNILGEGTFGLVYKGWIDQHKLTPTK 206
           C+ +P+ EG  L SPNLK FS  ELK ATR+FRPD++LGEG FG V+KGWID+H LT  K
Sbjct: 51  CLPTPRSEGEILSSPNLKAFSFNELKNATRNFRPDSLLGEGGFGYVFKGWIDEHTLTAAK 110

Query: 205 PGTGLAVAVKIHKPESFQGQKEWLTEIYYLGRYYHSNLVRLIGYCTEDGRFLLVYEFVPR 26
           PG+G+ VAVK  KPE FQG KEWLTE+ YLG+ +H NLV+LIGYC E    LLVYEF+P+
Sbjct: 111 PGSGMVVAVKKLKPEGFQGHKEWLTEVNYLGQLHHPNLVKLIGYCLEGENRLLVYEFMPK 170

Query: 25  GSLDNHLF 2
           GSL+NHLF
Sbjct: 171 GSLENHLF 178


>ref|XP_002311169.1| predicted protein [Populus trichocarpa] gi|222850989|gb|EEE88536.1|
           predicted protein [Populus trichocarpa]
          Length = 368

 Score =  179 bits (455), Expect = 4e-43
 Identities = 88/139 (63%), Positives = 106/139 (76%)
 Frame = -1

Query: 418 SSSTVGQNINTCISSPQIEGGELKSPNLKIFSLRELKAATRSFRPDNILGEGTFGLVYKG 239
           SSS V  +  T  S+P+ +G  L+S NLK FS  ELKAATR+FRPD++LGEG FG V+KG
Sbjct: 17  SSSKVSSS--TVPSTPRTQGEILQSSNLKSFSFNELKAATRNFRPDSVLGEGGFGCVFKG 74

Query: 238 WIDQHKLTPTKPGTGLAVAVKIHKPESFQGQKEWLTEIYYLGRYYHSNLVRLIGYCTEDG 59
           WID+H LT  KPGTG+ +AVK    ESFQG +EWL EI YLG+ YH NLV+LIGYC ED 
Sbjct: 75  WIDEHSLTAAKPGTGIVIAVKRLSQESFQGHQEWLAEINYLGQLYHPNLVKLIGYCLEDD 134

Query: 58  RFLLVYEFVPRGSLDNHLF 2
             LLVYEF+P+GSL+NHLF
Sbjct: 135 HRLLVYEFMPKGSLENHLF 153


>ref|XP_003519043.1| PREDICTED: LOW QUALITY PROTEIN: protein kinase 2B,
           chloroplastic-like [Glycine max]
          Length = 414

 Score =  178 bits (452), Expect = 8e-43
 Identities = 83/127 (65%), Positives = 100/127 (78%)
 Frame = -1

Query: 382 ISSPQIEGGELKSPNLKIFSLRELKAATRSFRPDNILGEGTFGLVYKGWIDQHKLTPTKP 203
           + +P+ EG  L SPNLK F+  ELK ATR+FRPD++LGEG FG VYKGWID+H  T +KP
Sbjct: 47  LPTPRSEGEILSSPNLKPFTFNELKNATRNFRPDSLLGEGGFGYVYKGWIDEHTFTASKP 106

Query: 202 GTGLAVAVKIHKPESFQGQKEWLTEIYYLGRYYHSNLVRLIGYCTEDGRFLLVYEFVPRG 23
           G+G+ VAVK  KPE FQG KEWLTE+ YLG+ YH NLV+LIGYC E    LLVYEF+P+G
Sbjct: 107 GSGMVVAVKRLKPEGFQGHKEWLTEVNYLGQLYHPNLVKLIGYCLEGENRLLVYEFMPKG 166

Query: 22  SLDNHLF 2
           SL+NHLF
Sbjct: 167 SLENHLF 173


>ref|XP_003517946.1| PREDICTED: LOW QUALITY PROTEIN: protein kinase 2B,
           chloroplastic-like [Glycine max]
          Length = 422

 Score =  178 bits (452), Expect = 8e-43
 Identities = 83/127 (65%), Positives = 100/127 (78%)
 Frame = -1

Query: 382 ISSPQIEGGELKSPNLKIFSLRELKAATRSFRPDNILGEGTFGLVYKGWIDQHKLTPTKP 203
           + +P+ EG  L SPNLK F+  ELK ATR+FRPD++LGEG FG VYKGWID+H  T +KP
Sbjct: 47  LPTPRSEGEILSSPNLKPFTFNELKNATRNFRPDSLLGEGGFGYVYKGWIDEHTFTASKP 106

Query: 202 GTGLAVAVKIHKPESFQGQKEWLTEIYYLGRYYHSNLVRLIGYCTEDGRFLLVYEFVPRG 23
           G+G+ VAVK  KPE FQG KEWLTE+ YLG+ YH NLV+LIGYC E    LLVYEF+P+G
Sbjct: 107 GSGMVVAVKRLKPEGFQGHKEWLTEVNYLGQLYHPNLVKLIGYCLEGENRLLVYEFMPKG 166

Query: 22  SLDNHLF 2
           SL+NHLF
Sbjct: 167 SLENHLF 173


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