BLASTX nr result

ID: Coptis21_contig00021587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021587
         (1172 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267317.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   583   e-164
emb|CCG06554.1| E3 ubiquitin ligase [Lotus japonicus]                 581   e-163
ref|NP_001242196.1| uncharacterized protein LOC100810573 [Glycin...   575   e-162
ref|XP_002277712.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...   574   e-161
emb|CAN75137.1| hypothetical protein VITISV_040754 [Vitis vinifera]   574   e-161

>ref|XP_002267317.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Vitis vinifera]
            gi|297742353|emb|CBI34502.3| unnamed protein product
            [Vitis vinifera]
          Length = 316

 Score =  583 bits (1503), Expect = e-164
 Identities = 275/310 (88%), Positives = 286/310 (92%), Gaps = 1/310 (0%)
 Frame = -3

Query: 1047 CVSSSDGIDEEDILXXXXXXXXXXXXXXXHTTTPIIHPATSVHELLECPVCTNSMYPPIH 868
            CVSS+DGI EE+I                +  +P I PATSVHELLECPVCTNSMYPPIH
Sbjct: 8    CVSSTDGIYEEEI-HHHHHQFSSSSKPHSNVVSPAISPATSVHELLECPVCTNSMYPPIH 66

Query: 867  QCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYY 688
            QCHNGHTLCSTCK+RVHNRCPTCRQELGDIRCLALEKVAESLELPCKY SLGCPEIFPYY
Sbjct: 67   QCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFPYY 126

Query: 687  SKLKHESQCNFRPYSCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHRYVKSNPR 508
            SKLKHE+QCNFRPY+CPYAGSEC+VVGDIPFLV+HLRDDHKVDMHTGCTFNHRYVKSNPR
Sbjct: 127  SKLKHEAQCNFRPYNCPYAGSECAVVGDIPFLVSHLRDDHKVDMHTGCTFNHRYVKSNPR 186

Query: 507  EVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNFSYSLEVGANG 328
            EVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE EARNFSYSLEVGANG
Sbjct: 187  EVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEIEARNFSYSLEVGANG 246

Query: 327  RKLIWEGTPRSIRDTHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNPD 148
            RKLIWEGTPRSIRD+H+KVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNPD
Sbjct: 247  RKLIWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQQNPD 306

Query: 147  -GVCIPNLCS 121
             GVCIPNLCS
Sbjct: 307  AGVCIPNLCS 316


>emb|CCG06554.1| E3 ubiquitin ligase [Lotus japonicus]
          Length = 324

 Score =  581 bits (1498), Expect = e-163
 Identities = 276/317 (87%), Positives = 284/317 (89%), Gaps = 8/317 (2%)
 Frame = -3

Query: 1047 CVSSSDGIDEEDI-------LXXXXXXXXXXXXXXXHTTTPIIHPATSVHELLECPVCTN 889
            CVSSSDG+DE++I                             I PATSVHELLECPVCTN
Sbjct: 8    CVSSSDGMDEDEIHAHHHSEFSSTKARNGGGNNNNAAMGPTAITPATSVHELLECPVCTN 67

Query: 888  SMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGC 709
            SMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGC
Sbjct: 68   SMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGC 127

Query: 708  PEIFPYYSKLKHESQCNFRPYSCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHR 529
            PEIFPYYSKLKHE+ CNFRPYSCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHR
Sbjct: 128  PEIFPYYSKLKHETICNFRPYSCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHR 187

Query: 528  YVKSNPREVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNFSYS 349
            YVKSNPREVENATWMLTVF+CFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE EARN+SYS
Sbjct: 188  YVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYSYS 247

Query: 348  LEVGANGRKLIWEGTPRSIRDTHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIW 169
            LEVGANGRKLIWEGTPRS+RD+HRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIW
Sbjct: 248  LEVGANGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIW 307

Query: 168  KEQQNPD-GVCIPNLCS 121
            KEQQNPD GVCIPNLCS
Sbjct: 308  KEQQNPDAGVCIPNLCS 324


>ref|NP_001242196.1| uncharacterized protein LOC100810573 [Glycine max]
            gi|255636330|gb|ACU18504.1| unknown [Glycine max]
          Length = 323

 Score =  575 bits (1483), Expect = e-162
 Identities = 272/316 (86%), Positives = 283/316 (89%), Gaps = 7/316 (2%)
 Frame = -3

Query: 1047 CVSSSDGIDEEDILXXXXXXXXXXXXXXXHTTTPI-------IHPATSVHELLECPVCTN 889
            CVSSSDG+DE++I                  T+ I       I PATSVHELLECPVCTN
Sbjct: 8    CVSSSDGMDEDEIHANHHHSEFSSTKPRNGGTSNINSVGPNGIAPATSVHELLECPVCTN 67

Query: 888  SMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGC 709
            SMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGC
Sbjct: 68   SMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGC 127

Query: 708  PEIFPYYSKLKHESQCNFRPYSCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHR 529
            PEIFPYYSKLKHE+ CNFRPYSCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHR
Sbjct: 128  PEIFPYYSKLKHETVCNFRPYSCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTFNHR 187

Query: 528  YVKSNPREVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNFSYS 349
            YVKSNPREVENATWMLTVF+CFGQYFCLHFEAFQLGMAPVYMAFLRFMGDE EARN+SYS
Sbjct: 188  YVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYSYS 247

Query: 348  LEVGANGRKLIWEGTPRSIRDTHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIW 169
            LEVGANGRKLIWEGTPRS+RD+HRKVRDS DGLIIQRNMALFFSGGDRKELKLRVTGRIW
Sbjct: 248  LEVGANGRKLIWEGTPRSVRDSHRKVRDSRDGLIIQRNMALFFSGGDRKELKLRVTGRIW 307

Query: 168  KEQQNPDGVCIPNLCS 121
            KEQ +  GVC+PNLCS
Sbjct: 308  KEQNSDAGVCMPNLCS 323


>ref|XP_002277712.1| PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Vitis vinifera]
          Length = 327

 Score =  574 bits (1480), Expect = e-161
 Identities = 273/320 (85%), Positives = 287/320 (89%), Gaps = 11/320 (3%)
 Frame = -3

Query: 1047 CVSSSDGIDEEDI--LXXXXXXXXXXXXXXXHTTTPIIH--------PATSVHELLECPV 898
            CVSSSDG++EE+I  L                ++ P+ +        PATSVHELLECPV
Sbjct: 8    CVSSSDGMEEEEIHHLHHHHHNLNHNHVVHQFSSKPLQNGVVPPATAPATSVHELLECPV 67

Query: 897  CTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYS 718
            CTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYS
Sbjct: 68   CTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYS 127

Query: 717  LGCPEIFPYYSKLKHESQCNFRPYSCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTF 538
            LGCPEIFPYYSKLKHE+ CNFRPY+CPYAGSECSVVGDIPFLV+HLRDDHKVDMHTGCTF
Sbjct: 128  LGCPEIFPYYSKLKHEAVCNFRPYNCPYAGSECSVVGDIPFLVSHLRDDHKVDMHTGCTF 187

Query: 537  NHRYVKSNPREVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNF 358
            NHRYVKSNPREVENATWMLTVF+CFGQYFCLHFEAFQLGM+PVYMAFLRFMGDE EARN+
Sbjct: 188  NHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMSPVYMAFLRFMGDENEARNY 247

Query: 357  SYSLEVGANGRKLIWEGTPRSIRDTHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTG 178
             YSLEVGANGRKLIWEGTPRSIRD+HRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTG
Sbjct: 248  GYSLEVGANGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTG 307

Query: 177  RIWKEQQNPD-GVCIPNLCS 121
            RIWKEQQN D GVCIPNLCS
Sbjct: 308  RIWKEQQNQDAGVCIPNLCS 327


>emb|CAN75137.1| hypothetical protein VITISV_040754 [Vitis vinifera]
          Length = 327

 Score =  574 bits (1480), Expect = e-161
 Identities = 273/320 (85%), Positives = 287/320 (89%), Gaps = 11/320 (3%)
 Frame = -3

Query: 1047 CVSSSDGIDEEDI--LXXXXXXXXXXXXXXXHTTTPIIH--------PATSVHELLECPV 898
            CVSSSDG++EE+I  L                ++ P+ +        PATSVHELLECPV
Sbjct: 8    CVSSSDGMEEEEIHHLHHHHHNLNHNHVVHQFSSKPLQNGVVPPAXAPATSVHELLECPV 67

Query: 897  CTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYS 718
            CTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYS
Sbjct: 68   CTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYS 127

Query: 717  LGCPEIFPYYSKLKHESQCNFRPYSCPYAGSECSVVGDIPFLVAHLRDDHKVDMHTGCTF 538
            LGCPEIFPYYSKLKHE+ CNFRPY+CPYAGSECSVVGDIPFLV+HLRDDHKVDMHTGCTF
Sbjct: 128  LGCPEIFPYYSKLKHEAVCNFRPYNCPYAGSECSVVGDIPFLVSHLRDDHKVDMHTGCTF 187

Query: 537  NHRYVKSNPREVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETEARNF 358
            NHRYVKSNPREVENATWMLTVF+CFGQYFCLHFEAFQLGM+PVYMAFLRFMGDE EARN+
Sbjct: 188  NHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMSPVYMAFLRFMGDENEARNY 247

Query: 357  SYSLEVGANGRKLIWEGTPRSIRDTHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTG 178
             YSLEVGANGRKLIWEGTPRSIRD+HRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTG
Sbjct: 248  GYSLEVGANGRKLIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTG 307

Query: 177  RIWKEQQNPD-GVCIPNLCS 121
            RIWKEQQN D GVCIPNLCS
Sbjct: 308  RIWKEQQNQDAGVCIPNLCS 327


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