BLASTX nr result

ID: Coptis21_contig00021581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021581
         (759 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281437.1| PREDICTED: nudix hydrolase 20, chloroplastic...   249   3e-64
ref|XP_002281417.2| PREDICTED: nudix hydrolase 20, chloroplastic...   248   1e-63
emb|CBI28108.3| unnamed protein product [Vitis vinifera]              248   1e-63
gb|ACG40873.1| nudix hydrolase 24 [Zea mays]                          243   3e-62
ref|NP_001137097.1| uncharacterized protein LOC100217273 [Zea ma...   239   4e-61

>ref|XP_002281437.1| PREDICTED: nudix hydrolase 20, chloroplastic [Vitis vinifera]
           gi|297738865|emb|CBI28110.3| unnamed protein product
           [Vitis vinifera]
          Length = 364

 Score =  249 bits (637), Expect = 3e-64
 Identities = 111/169 (65%), Positives = 140/169 (82%)
 Frame = -3

Query: 757 TYGVLVHGYVERDGEKFMWVGKRSDVKPTWAGRLDHVAAGGIPHNVSCGLNAMKECEEEA 578
           +YGV ++GY ER+G+K++W+GKRS VKPT+ G LDH+ AGG+PH ++C  N MKECEEEA
Sbjct: 195 SYGVHMNGYTERNGQKYLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACKENVMKECEEEA 254

Query: 577 GIPRSISKAAIPVGAISFLDIDEYRYKREVIFCYDLKLSDGFVPYNQDGEVESFKLIPVK 398
           GIPRS+SK A+PVGA+S+ DID YRYKR+V+FCYDLKL D F+P NQDGEVESF+LIPV 
Sbjct: 255 GIPRSMSKEAVPVGAVSYGDIDGYRYKRDVLFCYDLKLPDDFIPKNQDGEVESFRLIPVS 314

Query: 397 HVAKIIQSTDFFRPSASVAITDFLFRHGFIRPDQRGYLELLQSLKSGDC 251
            VA +++ T FF+ + S+ I DFLFRHG+I PD  GYLELLQSL+ GDC
Sbjct: 315 QVADVVRRTHFFKANCSLVIIDFLFRHGYIGPDSLGYLELLQSLRRGDC 363


>ref|XP_002281417.2| PREDICTED: nudix hydrolase 20, chloroplastic-like isoform 1 [Vitis
           vinifera]
          Length = 364

 Score =  248 bits (633), Expect = 1e-63
 Identities = 110/169 (65%), Positives = 140/169 (82%)
 Frame = -3

Query: 754 YGVLVHGYVERDGEKFMWVGKRSDVKPTWAGRLDHVAAGGIPHNVSCGLNAMKECEEEAG 575
           YG+ ++GY ER+G+K++W+GKRS VK T+ G LDH+ +GG+PH ++C  N MKECEEEAG
Sbjct: 196 YGIQMNGYTERNGQKYLWIGKRSQVKTTYPGMLDHLVSGGLPHGIACMENVMKECEEEAG 255

Query: 574 IPRSISKAAIPVGAISFLDIDEYRYKREVIFCYDLKLSDGFVPYNQDGEVESFKLIPVKH 395
           IPRS+SK A+PVGA+S+ DID YRYKR+V+FCYDLKL D F+P NQDGEVESF+LIPV  
Sbjct: 256 IPRSMSKEAVPVGAVSYGDIDGYRYKRDVLFCYDLKLPDDFIPKNQDGEVESFRLIPVSQ 315

Query: 394 VAKIIQSTDFFRPSASVAITDFLFRHGFIRPDQRGYLELLQSLKSGDCS 248
           VA +++ T FF+ + S+ I DFLFRHG+I PD  GYLELLQSL+SGDCS
Sbjct: 316 VADVVRRTHFFKSNCSLVIIDFLFRHGYIGPDSLGYLELLQSLRSGDCS 364


>emb|CBI28108.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  248 bits (633), Expect = 1e-63
 Identities = 110/169 (65%), Positives = 140/169 (82%)
 Frame = -3

Query: 754 YGVLVHGYVERDGEKFMWVGKRSDVKPTWAGRLDHVAAGGIPHNVSCGLNAMKECEEEAG 575
           YG+ ++GY ER+G+K++W+GKRS VK T+ G LDH+ +GG+PH ++C  N MKECEEEAG
Sbjct: 224 YGIQMNGYTERNGQKYLWIGKRSQVKTTYPGMLDHLVSGGLPHGIACMENVMKECEEEAG 283

Query: 574 IPRSISKAAIPVGAISFLDIDEYRYKREVIFCYDLKLSDGFVPYNQDGEVESFKLIPVKH 395
           IPRS+SK A+PVGA+S+ DID YRYKR+V+FCYDLKL D F+P NQDGEVESF+LIPV  
Sbjct: 284 IPRSMSKEAVPVGAVSYGDIDGYRYKRDVLFCYDLKLPDDFIPKNQDGEVESFRLIPVSQ 343

Query: 394 VAKIIQSTDFFRPSASVAITDFLFRHGFIRPDQRGYLELLQSLKSGDCS 248
           VA +++ T FF+ + S+ I DFLFRHG+I PD  GYLELLQSL+SGDCS
Sbjct: 344 VADVVRRTHFFKSNCSLVIIDFLFRHGYIGPDSLGYLELLQSLRSGDCS 392


>gb|ACG40873.1| nudix hydrolase 24 [Zea mays]
          Length = 353

 Score =  243 bits (620), Expect = 3e-62
 Identities = 109/169 (64%), Positives = 141/169 (83%)
 Frame = -3

Query: 754 YGVLVHGYVERDGEKFMWVGKRSDVKPTWAGRLDHVAAGGIPHNVSCGLNAMKECEEEAG 575
           YGV ++GYVE+DG+KF+W+GKRSDVK T+ G LDH+ AGG+P+ +SC  N +KECEEEAG
Sbjct: 185 YGVHMNGYVEKDGQKFLWIGKRSDVKQTYPGMLDHLVAGGLPYGMSCKENIIKECEEEAG 244

Query: 574 IPRSISKAAIPVGAISFLDIDEYRYKREVIFCYDLKLSDGFVPYNQDGEVESFKLIPVKH 395
           I RSIS  A  VGA+S++DI+ +RYKR+V+FCYDL+L   FVP N+DGEV+SF+L+PV H
Sbjct: 245 ITRSISTNATSVGAVSYMDIEGFRYKRDVLFCYDLQLPADFVPNNEDGEVDSFRLVPVIH 304

Query: 394 VAKIIQSTDFFRPSASVAITDFLFRHGFIRPDQRGYLELLQSLKSGDCS 248
            A II+ TDFF+P+ ++ I DFLFRHG+I PD RGYL+LLQSL+SGDCS
Sbjct: 305 AANIIRRTDFFKPNCNLVIIDFLFRHGYINPDSRGYLDLLQSLRSGDCS 353


>ref|NP_001137097.1| uncharacterized protein LOC100217273 [Zea mays]
           gi|194698354|gb|ACF83261.1| unknown [Zea mays]
           gi|414885014|tpg|DAA61028.1| TPA: nudix hydrolase 24
           [Zea mays]
          Length = 353

 Score =  239 bits (611), Expect = 4e-61
 Identities = 108/169 (63%), Positives = 140/169 (82%)
 Frame = -3

Query: 754 YGVLVHGYVERDGEKFMWVGKRSDVKPTWAGRLDHVAAGGIPHNVSCGLNAMKECEEEAG 575
           YGV ++GYVE+DG+KF+W+GKRSDVK T+ G LDH+ AGG+P+ +SC  N +KECEEEAG
Sbjct: 185 YGVHMNGYVEKDGQKFLWIGKRSDVKQTYPGMLDHLVAGGLPYGMSCKENIIKECEEEAG 244

Query: 574 IPRSISKAAIPVGAISFLDIDEYRYKREVIFCYDLKLSDGFVPYNQDGEVESFKLIPVKH 395
           I RSIS  A  VGA+S++DI+ +RYKR+V+FCYDL+L   FVP N+DGEV+SF+L+PV H
Sbjct: 245 ITRSISTNATSVGAVSYMDIEGFRYKRDVLFCYDLQLPADFVPNNEDGEVDSFRLVPVIH 304

Query: 394 VAKIIQSTDFFRPSASVAITDFLFRHGFIRPDQRGYLELLQSLKSGDCS 248
            A II+ TDFF+P+ ++ I DFLFRHG+I PD R YL+LLQSL+SGDCS
Sbjct: 305 AANIIRRTDFFKPNCNLVIIDFLFRHGYINPDSRCYLDLLQSLRSGDCS 353


Top