BLASTX nr result

ID: Coptis21_contig00021579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021579
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170632.1| PREDICTED: protochlorophyllide-dependent tra...   198   3e-49
ref|XP_004144089.1| PREDICTED: protochlorophyllide-dependent tra...   198   3e-49
ref|XP_004144087.1| PREDICTED: protochlorophyllide-dependent tra...   198   4e-49
ref|XP_004170633.1| PREDICTED: LOW QUALITY PROTEIN: protochlorop...   195   4e-48
ref|XP_003629721.1| Pheophorbide a oxygenase [Medicago truncatul...   194   5e-48

>ref|XP_004170632.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
           chloroplastic-like [Cucumis sativus]
          Length = 538

 Score =  198 bits (504), Expect = 3e-49
 Identities = 83/106 (78%), Positives = 93/106 (87%)
 Frame = +2

Query: 2   CVYHGWCFNGSGDCKFIPQAPPDGPQIHTSKKACASAYPSFEQNKILWFWPRSEPQYKDI 181
           CVYHGWCFNGSGDCKFIPQAPPDGP +HTSK+AC S YPS  QN ILWFWP S+PQYKDI
Sbjct: 141 CVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVSVYPSVVQNDILWFWPNSDPQYKDI 200

Query: 182 GAKEKPPCVPELDDPSFTSLLMSRDLPYGYEVLIENLMDPAHVPYA 319
            AK+ PP +PE+DDPS+  L++SRDLPYGYE+L ENLMDPAHVPYA
Sbjct: 201 MAKKTPPYIPEIDDPSYAKLIISRDLPYGYEILTENLMDPAHVPYA 246


>ref|XP_004144089.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
           chloroplastic-like [Cucumis sativus]
          Length = 538

 Score =  198 bits (504), Expect = 3e-49
 Identities = 83/106 (78%), Positives = 93/106 (87%)
 Frame = +2

Query: 2   CVYHGWCFNGSGDCKFIPQAPPDGPQIHTSKKACASAYPSFEQNKILWFWPRSEPQYKDI 181
           CVYHGWCFNGSGDCKFIPQAPPDGP +HTSK+AC S YPS  QN ILWFWP S+PQYKDI
Sbjct: 141 CVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVSVYPSVVQNDILWFWPNSDPQYKDI 200

Query: 182 GAKEKPPCVPELDDPSFTSLLMSRDLPYGYEVLIENLMDPAHVPYA 319
            AK+ PP +PE+DDPS+  L++SRDLPYGYE+L ENLMDPAHVPYA
Sbjct: 201 MAKKTPPYIPEIDDPSYAKLIISRDLPYGYEILTENLMDPAHVPYA 246


>ref|XP_004144087.1| PREDICTED: protochlorophyllide-dependent translocon component 52,
           chloroplastic-like [Cucumis sativus]
          Length = 544

 Score =  198 bits (503), Expect = 4e-49
 Identities = 82/106 (77%), Positives = 93/106 (87%)
 Frame = +2

Query: 2   CVYHGWCFNGSGDCKFIPQAPPDGPQIHTSKKACASAYPSFEQNKILWFWPRSEPQYKDI 181
           CVYHGWCFNGSGDCKFIPQAPPDGP +HTSK+AC + +PS  QN +LWFWP S+PQYKDI
Sbjct: 147 CVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVFPSIVQNDVLWFWPNSDPQYKDI 206

Query: 182 GAKEKPPCVPELDDPSFTSLLMSRDLPYGYEVLIENLMDPAHVPYA 319
             K+KPP +PELDDPSFT L+ +RDLPYGYE+L ENLMDPAHVPYA
Sbjct: 207 MEKKKPPYIPELDDPSFTKLISNRDLPYGYEILTENLMDPAHVPYA 252


>ref|XP_004170633.1| PREDICTED: LOW QUALITY PROTEIN: protochlorophyllide-dependent
           translocon component 52, chloroplastic-like, partial
           [Cucumis sativus]
          Length = 318

 Score =  195 bits (495), Expect = 4e-48
 Identities = 81/106 (76%), Positives = 92/106 (86%)
 Frame = +2

Query: 2   CVYHGWCFNGSGDCKFIPQAPPDGPQIHTSKKACASAYPSFEQNKILWFWPRSEPQYKDI 181
           CVYHGWCFNGSGDCKFIPQAPPDGP +HTSK+AC + + S  QN +LWFWP S+PQYKDI
Sbjct: 147 CVYHGWCFNGSGDCKFIPQAPPDGPPVHTSKRACVAVFXSIVQNDVLWFWPNSDPQYKDI 206

Query: 182 GAKEKPPCVPELDDPSFTSLLMSRDLPYGYEVLIENLMDPAHVPYA 319
             K+KPP +PELDDPSFT L+ +RDLPYGYE+L ENLMDPAHVPYA
Sbjct: 207 MEKKKPPYIPELDDPSFTKLISNRDLPYGYEILTENLMDPAHVPYA 252


>ref|XP_003629721.1| Pheophorbide a oxygenase [Medicago truncatula]
           gi|355523743|gb|AET04197.1| Pheophorbide a oxygenase
           [Medicago truncatula]
          Length = 532

 Score =  194 bits (494), Expect = 5e-48
 Identities = 81/106 (76%), Positives = 94/106 (88%)
 Frame = +2

Query: 2   CVYHGWCFNGSGDCKFIPQAPPDGPQIHTSKKACASAYPSFEQNKILWFWPRSEPQYKDI 181
           CVYHGWCFNGSGDCKFIPQAPP+GP IHTSKKAC +AYPS  QN ILWFWP ++PQYKDI
Sbjct: 123 CVYHGWCFNGSGDCKFIPQAPPEGPPIHTSKKACVAAYPSTVQNDILWFWPNTDPQYKDI 182

Query: 182 GAKEKPPCVPELDDPSFTSLLMSRDLPYGYEVLIENLMDPAHVPYA 319
             ++ PP +PE+DDPSFTS + +RD+PYGYEVL+ENLMDP+HVPYA
Sbjct: 183 ITRKTPPFIPEIDDPSFTSFMGNRDIPYGYEVLVENLMDPSHVPYA 228


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