BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021570
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27748.3| unnamed protein product [Vitis vinifera]              397   e-108
ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein lig...   395   e-108
ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|2...   350   5e-94
ref|XP_002516202.1| zinc finger protein, putative [Ricinus commu...   326   8e-87
ref|XP_002877935.1| zinc finger family protein [Arabidopsis lyra...   325   2e-86

>emb|CBI27748.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  397 bits (1021), Expect = e-108
 Identities = 191/318 (60%), Positives = 233/318 (73%), Gaps = 17/318 (5%)
 Frame = +1

Query: 1   EVFDLEND-------IRYTPLSRKGRNKKDAISVEKYTQDKELHKSIMSSLLQTKRIIDL 159
           E+ D+E +       +  TP+S +G  +  AISVE+Y+ DKEL+ SI +SLLQ +  + +
Sbjct: 12  EIVDMEEEDAEEQVSLFLTPISCRGGTRNTAISVEQYSADKELYLSIKASLLQPQTPL-I 70

Query: 160 SFXXXXXXXXVQVL-----TNP--FRKNKPFRYPSVTETGQSSNSQV---PTFVCEICVE 309
                     +Q+L     T P  F   KPF +PSVTETGQ SNS+    PTFVCEIC++
Sbjct: 71  HLDNDDDDDDLQILGINPPTTPHAFSTRKPFTFPSVTETGQPSNSKPDPPPTFVCEICID 130

Query: 310 PKSLNETFSIKGCKHSYCSDCMSKYVASKIQDNVTSITCPESNCLGVLELQFCQSILPKE 489
           PK LN +FSIKGC HSYCSDCM+KYVASK+QDNV+ I+CP  NC GVLE Q C+ ILP  
Sbjct: 131 PKPLNHSFSIKGCPHSYCSDCMTKYVASKLQDNVSRISCPAPNCTGVLEPQQCRPILPSH 190

Query: 490 VFDRWGNALCEQLILGAQKFYCPYKNCSALLIDDEGVVVKESECPHCRRMFCAQCKVPWH 669
           VFDRWGNALCE LILG+QKFYCPYK+CSALLI DEG V+KESECP+CRR+FCAQC+VPWH
Sbjct: 191 VFDRWGNALCEALILGSQKFYCPYKDCSALLIRDEGEVIKESECPNCRRLFCAQCEVPWH 250

Query: 670 YGIKCEEFQKLGKGEREREDIMLMKLAKDKKWQRCPKCKFFVERSEGCLFMKCRCGFTFC 849
            GI C EFQKL K ER REDI++M LAK   W+RCPKCKF+VE+S GC++++CRCGF FC
Sbjct: 251 SGIDCGEFQKLNKDERGREDILMMNLAKTNNWKRCPKCKFYVEKSFGCMYIRCRCGFAFC 310

Query: 850 YNCAAAMSPSNHNCTKCR 903
           YNC A  S  +H C  CR
Sbjct: 311 YNCGAPSSTISHICPHCR 328


>ref|XP_002277363.1| PREDICTED: probable E3 ubiquitin-protein ligase RNF144A-B-like
           [Vitis vinifera]
          Length = 358

 Score =  395 bits (1016), Expect = e-108
 Identities = 190/317 (59%), Positives = 232/317 (73%), Gaps = 17/317 (5%)
 Frame = +1

Query: 1   EVFDLEND-------IRYTPLSRKGRNKKDAISVEKYTQDKELHKSIMSSLLQTKRIIDL 159
           E+ D+E +       +  TP+S +G  +  AISVE+Y+ DKEL+ SI +SLLQ +  + +
Sbjct: 12  EIVDMEEEDAEEQVSLFLTPISCRGGTRNTAISVEQYSADKELYLSIKASLLQPQTPL-I 70

Query: 160 SFXXXXXXXXVQVL-----TNP--FRKNKPFRYPSVTETGQSSNSQV---PTFVCEICVE 309
                     +Q+L     T P  F   KPF +PSVTETGQ SNS+    PTFVCEIC++
Sbjct: 71  HLDNDDDDDDLQILGINPPTTPHAFSTRKPFTFPSVTETGQPSNSKPDPPPTFVCEICID 130

Query: 310 PKSLNETFSIKGCKHSYCSDCMSKYVASKIQDNVTSITCPESNCLGVLELQFCQSILPKE 489
           PK LN +FSIKGC HSYCSDCM+KYVASK+QDNV+ I+CP  NC GVLE Q C+ ILP  
Sbjct: 131 PKPLNHSFSIKGCPHSYCSDCMTKYVASKLQDNVSRISCPAPNCTGVLEPQQCRPILPSH 190

Query: 490 VFDRWGNALCEQLILGAQKFYCPYKNCSALLIDDEGVVVKESECPHCRRMFCAQCKVPWH 669
           VFDRWGNALCE LILG+QKFYCPYK+CSALLI DEG V+KESECP+CRR+FCAQC+VPWH
Sbjct: 191 VFDRWGNALCEALILGSQKFYCPYKDCSALLIRDEGEVIKESECPNCRRLFCAQCEVPWH 250

Query: 670 YGIKCEEFQKLGKGEREREDIMLMKLAKDKKWQRCPKCKFFVERSEGCLFMKCRCGFTFC 849
            GI C EFQKL K ER REDI++M LAK   W+RCPKCKF+VE+S GC++++CRCGF FC
Sbjct: 251 SGIDCGEFQKLNKDERGREDILMMNLAKTNNWKRCPKCKFYVEKSFGCMYIRCRCGFAFC 310

Query: 850 YNCAAAMSPSNHNCTKC 900
           YNC A  S  +H C  C
Sbjct: 311 YNCGAPSSTISHICPHC 327


>ref|XP_002324718.1| predicted protein [Populus trichocarpa] gi|222866152|gb|EEF03283.1|
           predicted protein [Populus trichocarpa]
          Length = 307

 Score =  350 bits (897), Expect = 5e-94
 Identities = 169/303 (55%), Positives = 218/303 (71%), Gaps = 14/303 (4%)
 Frame = +1

Query: 37  PLSRKGRNKKDAISVEKYTQDKELHKSIMSSLLQTKR--IIDLS----FXXXXXXXXVQV 198
           P+S KG  + +AISVE+Y +D++L+ +IM+SL   K    ID S    +        ++V
Sbjct: 2   PVSNKGTGENNAISVEEYGEDRDLNIAIMASLKSNKEANFIDPSQDYFYYYNDEDDDIKV 61

Query: 199 L-----TNPFRKNK-PFRYPSVTETGQSSNSQV-PTFVCEICVEPKSLNETFSIKGCKHS 357
           L       P RK K P    SV E GQSSNSQ+ P FVC+ICVEP  L  +F IKGC H+
Sbjct: 62  LDFLPEVIPSRKQKEPTFIESVAEKGQSSNSQIDPDFVCQICVEPTILKNSFLIKGCTHA 121

Query: 358 YCSDCMSKYVASKIQDNVTSITCPESNCLGVLELQFCQSILPKEVFDRWGNALCEQLILG 537
           YC++CM KYV+SK+Q+N+T I CP  +C G LE + C+S+LP+ VFDRWGNALCE +ILG
Sbjct: 122 YCTECMVKYVSSKLQENITKICCPVPDCKGALEPEDCRSVLPENVFDRWGNALCEAVILG 181

Query: 538 AQKFYCPYKNCSALLIDDEGVVVKESECPHCRRMFCAQCKVPWHYGIKCEEFQKLGKGER 717
           +QKFYCP+K+CSA+LIDD   VV+ESECP+C RMFCAQCKVPWH  I CEE++ L K ER
Sbjct: 182 SQKFYCPFKDCSAMLIDDGEEVVRESECPNCWRMFCAQCKVPWHSQISCEEYKMLHKDER 241

Query: 718 EREDIMLMKLAKDKKWQRCPKCKFFVERSEGCLFMKCRCGFTFCYNCAAA-MSPSNHNCT 894
           ER+DI+LM LAK+K W+RCPKC+ FVE+ EGC +MKCRCG  FCY+C +  ++P  H C 
Sbjct: 242 ERDDILLMNLAKNKNWRRCPKCRIFVEKIEGCRYMKCRCGTQFCYSCGSTDLNPVTHYCY 301

Query: 895 KCR 903
           KC+
Sbjct: 302 KCK 304


>ref|XP_002516202.1| zinc finger protein, putative [Ricinus communis]
           gi|223544688|gb|EEF46204.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 400

 Score =  326 bits (835), Expect = 8e-87
 Identities = 160/300 (53%), Positives = 210/300 (70%), Gaps = 22/300 (7%)
 Frame = +1

Query: 31  YTPLSRKGRNKKDAISVEKYTQDKELHKSIMSSLLQTK--------RIIDLS------FX 168
           YTP+S+KG      ISVE Y+++++L+ +I++SL  T            DLS        
Sbjct: 98  YTPISKKGNKNTTEISVESYSEERDLNVAILASLQSTSASNNNKQLNFNDLSQDYRNYCY 157

Query: 169 XXXXXXXVQVL-------TNPFRKNKPFRYPSVTETGQSSN-SQVPTFVCEICVEPKSLN 324
                  ++VL       T+     K     SVTE G SS  +  P FVCEICVE K+ +
Sbjct: 158 IDDENDDLRVLDFTPLPATSKKEMGKNRFGFSVTEKGHSSEPNDHPQFVCEICVESKTAD 217

Query: 325 ETFSIKGCKHSYCSDCMSKYVASKIQDNVTSITCPESNCLGVLELQFCQSILPKEVFDRW 504
           E+ +I+GC H+YC+DCM+KYVASKIQ+N+T I CP S C G+LE ++C+SILP+EVFDRW
Sbjct: 218 ESLAIRGCTHAYCTDCMAKYVASKIQENITGIYCPVSGCGGLLEPEYCRSILPQEVFDRW 277

Query: 505 GNALCEQLILGAQKFYCPYKNCSALLIDDEGVVVKESECPHCRRMFCAQCKVPWHYGIKC 684
           GNALCE L LG+QKFYCP+K+CSA+LI+D G V++ESECPHCRR+FCA CKVPWH GI C
Sbjct: 278 GNALCEALNLGSQKFYCPFKDCSAMLINDGGEVIRESECPHCRRLFCAHCKVPWHSGIDC 337

Query: 685 EEFQKLGKGEREREDIMLMKLAKDKKWQRCPKCKFFVERSEGCLFMKCRCGFTFCYNCAA 864
            +FQ L K ERE+EDIMLMKLA++KKW+RCP C+ +VER+EGC +MKCR  F  C+ C++
Sbjct: 338 NKFQTLHKDEREKEDIMLMKLAENKKWRRCPICRIYVERTEGCRYMKCRYIFICCFVCSS 397


>ref|XP_002877935.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297323773|gb|EFH54194.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 322

 Score =  325 bits (832), Expect = 2e-86
 Identities = 153/299 (51%), Positives = 198/299 (66%), Gaps = 8/299 (2%)
 Frame = +1

Query: 34  TPLSRKGRNKKDAISVEKYTQDKEL--------HKSIMSSLLQTKRIIDLSFXXXXXXXX 189
           TPLS +G  K+DAISVE Y +D++L        H   + S  ++   IDL          
Sbjct: 32  TPLSARGSTKRDAISVENYDRDRKLQRLWVYPPHNRAIKS--ESPIYIDLDLYNDEDDD- 88

Query: 190 VQVLTNPFRKNKPFRYPSVTETGQSSNSQVPTFVCEICVEPKSLNETFSIKGCKHSYCSD 369
           +++L  P     P  +    E GQSS+S   TF CEICVE KS+ ETF I GC H YC+D
Sbjct: 89  IRILCFP-----PPIHTKSLEKGQSSSSATVTFDCEICVETKSIIETFRIGGCSHFYCND 143

Query: 370 CMSKYVASKIQDNVTSITCPESNCLGVLELQFCQSILPKEVFDRWGNALCEQLILGAQKF 549
           C+SKY+A+K+QDN+ SI CP S C G LE   C+ ILP+EVFDRWG+ALCE +++ +++F
Sbjct: 144 CVSKYIAAKLQDNILSIECPVSGCSGRLEPDQCRQILPREVFDRWGDALCEAVVMRSKRF 203

Query: 550 YCPYKNCSALLIDDEGVVVKESECPHCRRMFCAQCKVPWHYGIKCEEFQKLGKGERERED 729
           YCPYK+CSALL  DE  V+K+SECPHC RM C +C   WH  + CEEFQKL + ER R+D
Sbjct: 204 YCPYKDCSALLFMDESEVMKDSECPHCHRMVCVECGTKWHPEMTCEEFQKLAENERGRDD 263

Query: 730 IMLMKLAKDKKWQRCPKCKFFVERSEGCLFMKCRCGFTFCYNCAAAMSPSNHNCTKCRR 906
           I+L  +AK KKW+RCP CKF++E+S GCL+MKCRCG  FCYNC       +H C  C+R
Sbjct: 264 ILLATMAKKKKWKRCPSCKFYIEKSHGCLYMKCRCGLAFCYNCGTPSRDHSHYCYNCKR 322