BLASTX nr result

ID: Coptis21_contig00021552 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021552
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282417.1| PREDICTED: uncharacterized protein LOC100246...    58   3e-06
emb|CAN74978.1| hypothetical protein VITISV_027198 [Vitis vinifera]    58   3e-06

>ref|XP_002282417.1| PREDICTED: uncharacterized protein LOC100246918 [Vitis vinifera]
          Length = 604

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = +3

Query: 441 MTGGSLGQRASSYGSLQHLPNNSVVLPIYTTP-VVARKPPKMLLSNAREKEKILPRICKF 617
           MTGG LG R+ SYGSLQHL N +     +  P  V RKP KML S +REKE++LP + +F
Sbjct: 1   MTGGLLGLRSGSYGSLQHLQNGA----FHPQPQFVGRKPSKMLPSGSREKERLLPYLFRF 56


>emb|CAN74978.1| hypothetical protein VITISV_027198 [Vitis vinifera]
          Length = 616

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 32/60 (53%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
 Frame = +3

Query: 441 MTGGSLGQRASSYGSLQHLPNNSVVLPIYTTP-VVARKPPKMLLSNAREKEKILPRICKF 617
           MTGG LG R+ SYGSLQHL N +     +  P  V RKP KML S +REKE++LP + +F
Sbjct: 1   MTGGLLGLRSGSYGSLQHLQNGA----FHPQPQFVGRKPSKMLPSGSREKERLLPYLFRF 56


Top