BLASTX nr result

ID: Coptis21_contig00021550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00021550
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137840.1| PREDICTED: uncharacterized protein LOC101221...   316   6e-84
ref|XP_004161265.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   315   8e-84
ref|XP_002519486.1| conserved hypothetical protein [Ricinus comm...   310   5e-82
ref|XP_002323506.1| predicted protein [Populus trichocarpa] gi|2...   305   1e-80
gb|AFK34279.1| unknown [Lotus japonicus]                              304   3e-80

>ref|XP_004137840.1| PREDICTED: uncharacterized protein LOC101221206 [Cucumis sativus]
          Length = 243

 Score =  316 bits (809), Expect = 6e-84
 Identities = 160/191 (83%), Positives = 170/191 (89%), Gaps = 2/191 (1%)
 Frame = -2

Query: 756 NYDGYPFGDDDSSFGFYPWDSSIVDGDAAIRWVPEDRVTLFTSEGLVQIGGSVVPRRISS 577
           +Y G   GDDDS FG +PW     DGD+ I W+PE+RVTLFT +GLVQIGGS+VPRRISS
Sbjct: 58  SYSGGFMGDDDS-FGLFPW----ADGDSEIHWLPEERVTLFTPDGLVQIGGSIVPRRISS 112

Query: 576 SDK-QGKSKASQRFQR-QESDYMDPKQGLCLGALFDIAATNGLDMGRRLCIYGFCRSIEM 403
           SDK QGKSK SQRFQR QESDYMDPKQ +CLGALFDIAATNGLDMGRRLCI+GFCRS+EM
Sbjct: 113 SDKKQGKSKTSQRFQRFQESDYMDPKQSICLGALFDIAATNGLDMGRRLCIFGFCRSVEM 172

Query: 402 LSDVVEDTVLEHGGEVVAAEKASKGGLQEKLTMTVAVPLLWGVPPVSETLHLAVQSGGGI 223
           LSDVVED VLE GGEVVAAEKASKGGLQEKLTMTVAVPLLWGVPP SETLHLAVQSGGGI
Sbjct: 173 LSDVVEDIVLEQGGEVVAAEKASKGGLQEKLTMTVAVPLLWGVPPASETLHLAVQSGGGI 232

Query: 222 VEKVYWQWDFL 190
           VEKVYWQWDFL
Sbjct: 233 VEKVYWQWDFL 243


>ref|XP_004161265.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101229752 [Cucumis sativus]
          Length = 244

 Score =  315 bits (808), Expect = 8e-84
 Identities = 160/192 (83%), Positives = 170/192 (88%), Gaps = 3/192 (1%)
 Frame = -2

Query: 756 NYDGYPFGDDDSSFGFYPWDSSIVDGDAAIRWVPEDRVTLFTSEGLVQIGGSVVPRRISS 577
           +Y G   GDDDS FG +PW     DGD+ I W+PE+RVTLFT +GLVQIGGS+VPRRISS
Sbjct: 58  SYSGGFMGDDDS-FGLFPW----ADGDSEIHWLPEERVTLFTPDGLVQIGGSIVPRRISS 112

Query: 576 SD--KQGKSKASQRFQR-QESDYMDPKQGLCLGALFDIAATNGLDMGRRLCIYGFCRSIE 406
           SD  KQGKSK SQRFQR QESDYMDPKQ +CLGALFDIAATNGLDMGRRLCI+GFCRS+E
Sbjct: 113 SDVXKQGKSKTSQRFQRFQESDYMDPKQSICLGALFDIAATNGLDMGRRLCIFGFCRSVE 172

Query: 405 MLSDVVEDTVLEHGGEVVAAEKASKGGLQEKLTMTVAVPLLWGVPPVSETLHLAVQSGGG 226
           MLSDVVED VLE GGEVVAAEKASKGGLQEKLTMTVAVPLLWGVPP SETLHLAVQSGGG
Sbjct: 173 MLSDVVEDIVLEQGGEVVAAEKASKGGLQEKLTMTVAVPLLWGVPPASETLHLAVQSGGG 232

Query: 225 IVEKVYWQWDFL 190
           IVEKVYWQWDFL
Sbjct: 233 IVEKVYWQWDFL 244


>ref|XP_002519486.1| conserved hypothetical protein [Ricinus communis]
           gi|223541349|gb|EEF42900.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 237

 Score =  310 bits (793), Expect = 5e-82
 Identities = 169/247 (68%), Positives = 185/247 (74%), Gaps = 2/247 (0%)
 Frame = -2

Query: 924 MAETSALCSSTFSPFLNIXXXXXXXXXXXXNPFIPSLSKTCFSKSFRLVKCDAKEVNYDG 745
           MAETSALC S FS   +I                 S S    S+S RL    +   N+ G
Sbjct: 1   MAETSALCFSHFSSIPSICRSKESNSFLSTTSSKFSNSNPRSSRSLRLTCKASDSSNFLG 60

Query: 744 YPFGDDDSSFGFYPWDSSIVDGDAAIRWVPEDRVTLFTSEGLVQIGGSVVPRRISSSDK- 568
                 D SF F+PW     DGD+ I W+ E++VTLFT++GL+QIGGSVVPR +SSSDK 
Sbjct: 61  ------DDSFDFFPWS----DGDSVIEWIQEEKVTLFTADGLIQIGGSVVPRLVSSSDKK 110

Query: 567 QGKSKASQRFQR-QESDYMDPKQGLCLGALFDIAATNGLDMGRRLCIYGFCRSIEMLSDV 391
           Q KSK SQRFQR QESDYMDPKQGLCLGALF+IAATNGLDMGRRLCI+GFCRSIEMLSDV
Sbjct: 111 QEKSKTSQRFQRFQESDYMDPKQGLCLGALFNIAATNGLDMGRRLCIFGFCRSIEMLSDV 170

Query: 390 VEDTVLEHGGEVVAAEKASKGGLQEKLTMTVAVPLLWGVPPVSETLHLAVQSGGGIVEKV 211
           VEDTVLEHGGEVVAAEKA KGGL EKLTMTVAVP LWGVPP SETL LAV+SGGGIVEKV
Sbjct: 171 VEDTVLEHGGEVVAAEKAIKGGLHEKLTMTVAVPYLWGVPPASETLRLAVRSGGGIVEKV 230

Query: 210 YWQWDFL 190
           YWQWDFL
Sbjct: 231 YWQWDFL 237


>ref|XP_002323506.1| predicted protein [Populus trichocarpa] gi|222868136|gb|EEF05267.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  305 bits (780), Expect = 1e-80
 Identities = 168/249 (67%), Positives = 184/249 (73%), Gaps = 4/249 (1%)
 Frame = -2

Query: 924 MAETSALCSSTFS--PFLNIXXXXXXXXXXXXNPFIPSLSKTCFSKSFRLVKCDAKEVNY 751
           MAETSALC S FS  P                +PF  S S +  S+S R     +   N+
Sbjct: 1   MAETSALCLSPFSSLPSNIYRSREPNSYLSFASPFKSSASHSRSSRSIRFTCKASDSGNF 60

Query: 750 DGYPFGDDDSSFGFYPWDSSIVDGDAAIRWVPEDRVTLFTSEGLVQIGGSVVPRRISSSD 571
            G      D S GF+PW     DGD  I WV E+R+TLFT++GLVQIGGSVVPR ++SS+
Sbjct: 61  LG------DESLGFFPWS----DGDNDIEWVREERITLFTTDGLVQIGGSVVPRLVASSN 110

Query: 570 -KQGKSKASQRFQR-QESDYMDPKQGLCLGALFDIAATNGLDMGRRLCIYGFCRSIEMLS 397
            K+GKSK SQRFQR QESDYMDP QGLCLGALFDIAATNGLD GRRLCI+GFCRSIEMLS
Sbjct: 111 RKRGKSKTSQRFQRFQESDYMDPNQGLCLGALFDIAATNGLDTGRRLCIFGFCRSIEMLS 170

Query: 396 DVVEDTVLEHGGEVVAAEKASKGGLQEKLTMTVAVPLLWGVPPVSETLHLAVQSGGGIVE 217
           DVVEDTVLEHGGEVV AEKA KGGL EKLTMTVAVP LWGVPP SETL LAV+SGGGIVE
Sbjct: 171 DVVEDTVLEHGGEVVTAEKAIKGGLHEKLTMTVAVPYLWGVPPASETLRLAVRSGGGIVE 230

Query: 216 KVYWQWDFL 190
           KVYWQWDFL
Sbjct: 231 KVYWQWDFL 239


>gb|AFK34279.1| unknown [Lotus japonicus]
          Length = 239

 Score =  304 bits (778), Expect = 3e-80
 Identities = 170/253 (67%), Positives = 190/253 (75%), Gaps = 8/253 (3%)
 Frame = -2

Query: 924 MAETSALCSS--TFSPF----LNIXXXXXXXXXXXXNPFIPSLSKTCFSKSFRLVKCDAK 763
           MAETS LC S  TFS      ++              P  PS S T      RL++  A 
Sbjct: 1   MAETSTLCFSRLTFSSSAPSSISPSRTFPFFSHFNSFPLSPSHSIT----QPRLLRF-AP 55

Query: 762 EVNYDGYPFGDDDSSFGFYPWDSSIVDGDAAIRWVPEDRVTLFTSEGLVQIGGSVVPRRI 583
           + N+ G      D SFGF+PW     D D  I+W+PEDR+TLFT+EGLVQIGGS+VPRR+
Sbjct: 56  KANHSG------DHSFGFFPWSD---DADDEIQWLPEDRITLFTAEGLVQIGGSMVPRRV 106

Query: 582 SSSDK-QGKSKASQRFQR-QESDYMDPKQGLCLGALFDIAATNGLDMGRRLCIYGFCRSI 409
           SSSDK QGK K S++FQR QE+DYMDP QGLCLGALFDIAATNGLDM RRLCI+GFCRSI
Sbjct: 107 SSSDKKQGKFKTSKKFQRFQETDYMDPNQGLCLGALFDIAATNGLDMDRRLCIFGFCRSI 166

Query: 408 EMLSDVVEDTVLEHGGEVVAAEKASKGGLQEKLTMTVAVPLLWGVPPVSETLHLAVQSGG 229
           EMLSDVVEDTVLEHGGEV+AAEKASKG L EKLTMTVAVPLLWGVPP SETLHLAV+SGG
Sbjct: 167 EMLSDVVEDTVLEHGGEVLAAEKASKGDLHEKLTMTVAVPLLWGVPPASETLHLAVKSGG 226

Query: 228 GIVEKVYWQWDFL 190
           GIVEKVYWQW+FL
Sbjct: 227 GIVEKVYWQWNFL 239


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